Poeciliopsis prolifica (blackstripe livebearer): 129355630
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Entry
129355630 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11-like
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
129355630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129355630
Membrane trafficking [BR:
pprl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129355630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
129355630
NCBI-ProteinID:
XP_054881195
LinkDB
All DBs
Position
Unknown
AA seq
1440 aa
AA seq
DB search
MSLRQPTSTLDSPFAAWLNSFTTGDSERRAPASQQREVTIDESSSPGLVHRCVVVQKDQL
GFGFTVCGERVKLVQNVRPGGAAVKAGVHEGDRIIKVNGSPVSTMTHQEVVKLIKSGPHV
ALTLQGPPTSATSVPLEPLPSDPTPNQRSSLAGEGPPPPPPPLPSGLGSTPSQRITGPKP
LQDPEVQKHASQILRKMLEQEEAELQDFMEEFSKNPSPSLEERIESAKRRAHQVRVKIQN
QEGTGSESVTNYIQAGEGRLSMDSSEGDLEAFESPSSSPSLPFRTPXHRRQNSDTHTLSD
TGVKAQIISPEDEDEDGDGYAFNEMDGPFQDIELLKSRPAHMTVFMRYVFSQLLDPNPLL
FYLSVEAYLGSSPKDARALAPQICSHFLDPDAPLKIKVREEFLTEIENRLHAQEDIRGPL
SELQQQVLPDIQDQIQDYRNKQMIGLGSLFGEGDLLQLDGDPLKEKHVVDRQVAALWEIL
SKHEEDRSSPLASAVLLYLRHSGIKLRDSKVFLGLSTEKDKWLAFLKPKKTSSTKKEKDG
EDKKKNPILKYIGKPRSTSQSMRSGSVRNIIQQFENHTXLPGEEDGDAVDPQRLSSSSLG
EEGMDSPTVLVRLGRSGSLKAQGEDRRXGTVSSGDSVPRSRSDVDMEDCEERDQPGLRLL
QHSASSSASSNSARSLENPTXPFTPRSRRRSVDSQLALLPDAAVLEDEVCDGQNWRDTVP
PELLATLSPREVERQAVIYELFTTEVSHLRTLRVLDKVFYRKMRSVLNSEELACIFPNLP
QVYELHASLCEEMKKRRESPIVQNIGDVMLAKVEGAAGNEFQEQASQLCCQQTQALELIK
NKKRKDQRFAQIIQECEASPQCRRLQLKDLLVSEMLRLTKYPLLLDKIIKYTEGGSSDLP
SLQRAQACCRGILKAVNEDVRETEHRQRLSQYQRRLDVAPQLKSLDLTAKRMIHEGPLVW
KIGKDKQIEIQALLLSDCLVLLQKGPDDRLLLRYPSRWMGGGGVVIADNKTSFSPLVKLD
SLLVRSVATDKKALYIISTKETQIYELAAGSPSEKDTWKDLLEKTIKALDPQSNHGSLPV
SSSSLRSSSPALTEVRSAEEQSEFIGSHGTADDGMLGDHLADQPEANSSEEERXAGVAEA
ALHDVETLRRLLLPDVDEDRRSHDTDDTPTNTMSNGNADRRRQDSLETVLDLCLSEPRPR
QPEAPPPESRQTSAKVVRRAVVAGAPPPPPXSFCPDGTAGDVSLPSDLSSQSRGEADTQG
NLFYLVMPIDQGESVTDDLPDPPTPTASHFPQPPQDVSSSQTQPDEEKEEEEVVAASCPE
FIQSDSETMQTEVELEEGDNDNDGEDEETGPAAQQSHVIRNADEIFLTIEGLMSKLHKLK
EIEKAHHKLLDSLRDPSLSQESEDQPCCSATVSRTPSMDRSSGDGKEGNPGDLRILSTGF
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccgccagcccacatccaccctggacagcccttttgctgcttggctcaacagt
ttcacaactggcgattcggagcgcagagcccctgccagccaacagagagaggtgactata
gacgagagttcaagtcctggtctggtccacagatgtgtggtggtgcagaaggaccagctc
ggtttcggcttcaccgtctgcggagagagagtcaagcttgtgcagaacgtccgaccaggt
ggcgctgcagtcaaagctggggtccatgagggggaccggatcatcaaggtgaatggttca
ccggtctccaccatgactcaccaggaagtggtaaagctcataaaatccggaccgcacgtc
gccctaacactacaaggaccgcccacgtctgccacctccgtgcccttggagcctctccct
tcagaccctacgcccaatcagaggtcttccctggctggggagggtccgccccctcctcct
ccacctctaccctccggactgggcagcaccccatcacaaagaatcactggacccaaaccg
ctacaggatccagaagtgcaaaaacatgcaagtcagatactcaggaaaatgttggagcag
gaagaggctgaactccaggacttcatggaggaattttcgaagaacccgtcgccgtcgctg
gaggagcggatcgagagcgccaagaggagagctcaccaagtccgggtcaagattcagaat
caggagggaacgggatcagaatctgtcacaaactacatccaagcaggagaaggacggctg
tcgatggactccagtgaaggagacttggaggcctttgagagtcccagctcctccccctca
ttacccttcaggaccccgnntcaccgacgccagaactcggacacacacaccctgtctgac
acgggtgtcaaagcccagatcatcagccctgaggatgaagatgaagatggtgatggttat
gccttcaatgagatggacggtcccttccaggacatcgagttgttgaagtcacggccggca
cacatgacggtgttcatgagatacgtcttcagccagctgctggacccaaaccctctgctg
ttctacctgtctgtagaggcgtatttaggctcctcccctaaagacgcccgcgcactcgcg
cctcagatctgctcccacttcctggatcctgatgctcccttgaaaatcaaagtgcgtgag
gaatttctaacagaaatagagaaccgccttcacgcccaggaggacatcagagggcctctg
tctgagctgcagcagcaggttctgccggacatccaggaccagattcaagactacaggaac
aagcagatgatcggtctgggctccctgtttggagaaggagatctgcttcagctggacgga
gaccccctgaaggagaagcatgtggtggacagacaggtcgccgctctctgggagattcta
tcaaagcatgaagaggacagaagctctcctctggcctcggctgtcctcctctacctgcga
cactccggcatcaagctcagagactccaaggtcttcctcggcctgagcacggagaaggac
aagtggctggcttttctaaaacccaaaaagacaagcagcacgaagaaagagaaagatgga
gaggataagaagaaaaaccccatcctgaagtacatcggcaaaccccggagcacatctcag
tccatgcgttccggcagcgtgaggaacatcattcagcagttcgagaaccacacanngctt
ccaggagaggaggacggggatgctgtggacccccagaggttgtcctccagcagcctggga
gaggaaggcatggacagtcccacggtcttggtgcgtctggggcgcagcgggtcgctaaag
gctcagggtgaagaccgccggncgggcactgtctccagcggggactcggtgccccgctct
cgcagcgacgtggacatggaggactgcgaggagagggaccaaccgggcctccggctgctc
cagcacagcgcctcgtcatccgcgtccagcaactccgctaggtctcttgagaaccctaca
nccccattcacccctcggtccagacgcaggagtgtggactcacagctggccctgctgcca
gacgccgcggtgctggaggacgaggtgtgtgacggtcagaactggagggacacggttcct
cctgagctcctggcgaccctcagccccagggaagtggagcggcaggccgtcatttacgag
ctgttcaccactgaggtgtcccaccttcggaccttacgggttcttgacaaggttttttac
cggaagatgagatctgtgctgaactcagaggagctggcctgcatcttcccaaacctgcct
caggtctacgaactccacgcgagtctttgtgaggagatgaagaagcgaagagagagcccc
atcgttcagaacatcggagacgtcatgctggccaaggttgaaggcgcagctgggaacgag
ttccaggagcaggcgtcgcagctgtgctgccagcagactcaggctctggagctcatcaag
aacaaaaaacggaaggatcaacgcttcgcccaaatcatccaggagtgtgaggcgagtcct
cagtgtcggaggctgcagctcaaagacctgctggtgtctgagatgctgagactcaccaag
tatcctctgctgctggacaagatcatcaaatacacagagggcgggtcatcggacctcccg
tcgctgcagcgcgcccaagcttgttgccgaggcattctgaaggcagtcaacgaggacgtg
agggagacggagcatcgtcagcgcctcagtcagtaccagcgccggctggacgtcgcgccg
cagttgaagagtctggacctcaccgcgaagagaatgattcacgaaggtcctctcgtctgg
aagatcggcaaagacaagcagatagagatccaagcgctgctgctgtcggactgcctggtc
ctcctccaaaaaggccccgacgaccggctgctgctccgttatccgtcccgctggatggga
ggaggaggagtggtcatcgccgacaacaagacctccttcagtcccctggtgaagctggac
tcgctgctcgtccgctccgtggctacggacaaaaaagcgctgtacatcatcagcaccaaa
gagacgcagatttacgagctggcggcggggtcgccgtctgagaaagacacctggaaggat
ttacttgaaaagaccatcaaagctttagatccacagagcaatcacggatcacttcctgtg
tcttcttccagcctacgcagcagttcaccagccttaactgaagtccgttctgcagaggag
cagtcggagtttatcgggagccacggcaccgctgacgacggcatgctgggtgaccatctc
gccgaccaacctgaagccaacagcagcgaagaggagcggncagcgggcgtggccgaagcg
gctctgcacgacgtggaaacgctgcggcggctcctgctgccggacgtggacgaggaccgg
aggagccacgatacggacgacacccccaccaacaccatgagcaacgggaacgccgacaga
cgacggcaggactccctggagaccgtcctggacctctgcctgagtgagccgcggcccagg
cagccggaggctccgcccccagaaagcaggcagaccagcgccaaggtggtccggcgagct
gtggttgcgggtgctcctcctcctcctcctntctccttctgccctgatggcaccgccggc
gatgttagcctcccctccgatctgtcgtcacagtctagaggcgaggccgacacgcagggg
aacctcttctacctggtgatgccgatagaccaaggagagagcgtcaccgacgacctccct
gaccctcctacacccaccgccagccactttcctcaacctccacaggacgtgtcgtcatca
cagactcaaccggatgaggaaaaagaagaagaagaagtagtggcggccagctgcccggag
ttcatccaatcagattcagaaactatgcaaacggaggtagagttggaggaaggcgataat
gacaatgacggtgaggatgaggaaacgggcccagcggcacaacagagtcacgtgatcaga
aacgcggatgagatttttctcaccatcgagggcttgatgagcaagttgcacaagctgaag
gaaatcgagaaggcccatcacaagctgctagactctctcagagatccctccctgagccag
gagtcggaggaccagccgtgttgctctgcaaccgtctccaggacgccgtccatggaccgc
agctcaggagacggtaaggagggaaacccgggagatctcagaatcctctcaaccggattc
tga
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