Poeciliopsis prolifica (blackstripe livebearer): 129355943
Help
Entry
129355943 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03010
Ribosome
pprl04120
Ubiquitin mediated proteolysis
pprl04137
Mitophagy - animal
pprl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
129355943
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129355943
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129355943
04137 Mitophagy - animal
129355943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pprl03011
]
129355943
04121 Ubiquitin system [BR:
pprl04121
]
129355943
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprl04147
]
129355943
Ribosome [BR:
pprl03011
]
Ribosomal proteins
Eukaryotes
Small subunit
129355943
Archaea
129355943
Ubiquitin system [BR:
pprl04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
129355943
Exosome [BR:
pprl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129355943
Exosomal proteins of colorectal cancer cells
129355943
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Ubiquitin_4
Rad60-SLD_2
TBK1_ULD
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
129355943
NCBI-ProteinID:
XP_054881554
LinkDB
All DBs
Position
Unknown
AA seq
157 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDDGRTLSDY
NIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRR
ECPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaaccctcacggggaaaactataaccctcgaggttgagccttca
gatactattgaaaatgtcaaggctaagatccaggacaaggaaggaattcctcctgaccag
cagaggctgatctttgctgggaagcagctggaagacgacggacggacgctgtcggactac
aacatccagaaggagtctactctgcacctggtgctgcgtctgagaggcggcgccaagaaa
aggaagaagaagtcctacaccacacccaagaagaacaaacacaagaggaagaaggtcaag
ctggccgtgctcaagtactacaaggtggatgagaacggtaagatccaccgtctgcggcgc
gagtgtccggctgatgagtgcggcgccggcgtcttcatggcgagtcacttcgaccgccat
tactgcggcaaatgctgcctgacctactgcttcaacaagccggaggacaagtag
DBGET
integrated database retrieval system
