Poeciliopsis prolifica (blackstripe livebearer): 129355947
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Entry
129355947 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129355947
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
129355947
Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129355947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
129355947
NCBI-ProteinID:
XP_054881558
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MSCYTVTLPGPGPWGFRLQGGKDFNMPLTVSRITPGSKAAQGNLIQGDVIVAIDGVGTEG
MTHLDAQNKIKMAHHSLALTMTKSKRPVALAPPRMDAVIPMIPHQQVNGRASAPPQPAAA
GSPGRSGAAPSPHHRGQYNSPIGLYSEETLREMAAMQAGRPTDSGLSAQKTIEVTGPGGK
ATIIHAQYNMPISLYSQDAIMDTIAGQSQAKGHDAGRVSVSDRLVDSASPVCQAVRTTDQ
NQNQSDWSRRGAQSKTFQLLAHLTQTEPSRSGSAGSGGQRRSDQWVLYFCFQLSPFLQLH
AVSVCVQQGELQLCRLTWIHWISGTRRKRIQNVKPHDGSIELQNISPVRDGPPTHQAPPP
QQFQPQQFQPMPPLYQQPPPLQAPPTQQSSIQIPVGSXPPKVVSTACIFPSQPAPVQPRP
AAAAPPPAAPPGSSTANRPPWVTDTNFADKFDPGKTTTSSAKVQPLPQAAPPPPAYIPNP
SPAXPPAPSSAHITPSPAPFLPVARGVAQRAERFAASXRTPLCSACNSVIRGPFLVALGR
SWHPEEFNCHYCHVSLADVSFVEEQNNVYCENCYEEFFAPTCARCNTKIMGEVMHALRQT
WHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGH
TWHDTCFVCAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagctgctacacggtgaccctgccgggccccgggccctggggcttcaggctgcagggg
ggcaaggactttaacatgccactgaccgtctccaggataacgccgggcagcaaggcggcg
caggggaaccttatccagggcgacgtcatcgtggccatcgacggcgtcggcaccgagggg
atgacccacctggacgcccagaacaagatcaagatggcgcaccacagcctggcgctcacc
atgaccaagtcgaagcgccccgttgccttggcgccgcccagaatggacgccgtgattccc
atgatccctcaccagcaggtaaacggccgtgcgtctgcgccgccccagcctgcggcggcc
ggctctccggggaggagtggcgcggcgcccagcccccaccaccgggggcagtataactcc
cccatcggcctgtactcagaggagactctgagggagatggcggccatgcaggcgggtcgt
ccaaccgactcgggcctgtcggcccagaagaccatcgaggtgacgggtccgggcgggaag
gccaccatcatccacgcccagtacaacatgcccatcagcctgtactcgcaggacgccatc
atggacaccatcgccggccaatcgcaggccaagggacacgatgctggtcgtgtctctgta
agcgaccggctggtggacagcgcctctccagtctgccaggcggtccggaccacagaccag
aaccagaaccagagtgactggagtcgccgcggcgcccagtccaagacgttccagctgctg
gcccatctgacccaaaccgagcccagtaggtctggttctgctggttctggaggacaaagg
cggagcgatcaatgggttctttatttctgcttccagctcagtccatttctccagctgcat
gcagtgagtgtgtgtgtccagcagggggagctgcagctctgcaggctgacctggatccac
tggatttctggaacgagacggaaacggatccagaatgtcaaacctcatgatgggagcata
gagctccagaacatatcgccagtacgggatggcccgcccacgcaccaggctccgccccct
cagcagttccagccgcagcagttccagcccatgccgccgctctaccagcagcctccccca
ctccaagccccgcccacccagcagagctccatccagatccccgttggctccngccccccg
aaggtggtgagcacggcctgcatcttcccctcccagccagctccagtccagccccgccct
gcagcagccgccccaccccctgccgctcctccgggttcctccaccgccaaccgaccgccc
tgggtgaccgacaccaacttcgccgataagttcgacccggggaagaccaccacctcctcc
gcgaaggtccagccgcttcctcaggcggctccgcccccgccggcgtacatccctaacccg
tcccccgccnggccgcccgcccccagctccgcccacatcacaccgagccccgcccccttc
cttcctgtggcgaggggcgtggctcaaagagcagagaggttcgccgccagcnagcgcacg
cctctgtgttcagcgtgcaacagcgtcattaggggccccttcctggtggccctcggccgg
tcctggcaccccgaagagttcaactgccactactgccacgtctccctggccgacgtcagc
ttcgtggaggagcagaacaacgtctactgtgagaactgctacgaggagttcttcgctcca
acctgtgcccgctgcaacaccaagatcatgggggaagtgatgcacgccctgcggcagacg
tggcacaccacctgcttcgtgtgcgccgcctgcgggaaaccgtttggaaacagcctgttc
cacatggaggacggggagccgtactgcgagaaagattacgtcgccctgttcagcaccaag
tgtcacggctgcgacttcccggtggaggctggagataaattcatcgaggctctgggccac
acctggcacgacacctgcttcgtgtgcgcagtgtgccacgtgaacctggagggtcagccc
ttctactccaagaaggacaagcctctgtgcaagaagcacgcccacgccatcaacgtgtag
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