Poeciliopsis prolifica (blackstripe livebearer): 129355960
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Entry
129355960 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129355960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129355960
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129355960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
129355960
NCBI-ProteinID:
XP_054881569
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MLTTGAAVTNVTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSF
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGSSVRLFRSSAGLLPCFPADHXMFVFVGALVKTDEQEVIN
FLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKM
VLQLSKEPSARLLKHVVRCYLRLSDNLRAREALRQCLPDQLKDSTFAQVLKDDTTTKRWL
AQLVKNLQEGQVTDARGIPLAPQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgacgggagcggccgtgaccaacgtcacggcgctggcccaggtggaccgggag
aagatctaccagtggatcaatgagctgtccagtccggagaccagggagaatgctctgctg
gagctgagcaagaagcgggagtcggttccggacctcgccccgatgctctggcactccttt
ggcaccatcgccgcgctgctgcaggaaatagtgaacatctacccgtccatcaaccctccc
accctcaccgctcaccagtccaacagggtgtgcaatgcgctggcgctgctgcagtgcgtc
gcctcgcaccctgagacgcggtcggcgttcctggcggctcacattcccctcttcctgtat
ccgttcctgcacaccgtcagcaaaacgcggcccttcgagtacctgcgcctcaccagcctg
gggtcatcggtgcgtctcttcaggagctctgctggtttacttccatgttttccagcagat
cattaaatgtttgtttttgtaggagctttggtgaaaacagacgaacaggaagtgatcaac
ttcctcctgacaactgaaatcatcccgctgtgtctgcgcatcatggagtcagggagcgaa
ctctccaaaacggtcgcgaccttcatcctgcagaagatcctcctggacgacaccggcttg
gcttacatctgccagacctacgagcgtttctcccatgtggccatgattctggggaagatg
gtgctgcagctctccaaggagccgtcggcccggctgctgaagcacgttgtccgctgctac
ctgcgcctctcggataacctcagagccagagaggcgctgcgtcagtgtctgccggaccag
ctgaaagacagcaccttcgcccaggttctgaaggacgacaccaccaccaagcgctggctc
gctcagctcgtcaagaacctgcaggagggccaggtgacggacgcccgcggcatcccgctc
gccccgcagtga
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