Poeciliopsis prolifica (blackstripe livebearer): 129356275
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Entry
129356275 CDS
T09758
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129356275
Spliceosome [BR:
pprl03041
]
Common components
Common spliceosomal components
General mRNP proteins
129356275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
129356275
NCBI-ProteinID:
XP_054881843
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MMADDLDIEAMLEAPFRKEDGKNQSPEGQEERSKRKKRSRSRDRKRSRSRDKKRSRSRER
KGSRSRDRRRSRSRERRRSRSRERGGRYKDHHKHRRRSRSKSPIRKEKSPPRLPLDNLTP
EERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSV
PLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANSLQKGSFGPMRLYVGSLHFNITEEM
LRGIFEPFGRIENIQLMMDSETGRSKGFGFITFADAECAKKALEQLNGFELAGRPMKVGH
VTERTDAAAASSFLDNDELDRSGVDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGAI
AIGALAAVSAAMNPPLTMNMSTPALNLPSQPLATHCFQLSNMFNPNSENVLGWELDIQHD
VIEECNKHGGVVHIYVDKNSAEGNVYVKCPSIPSAMAAVNALHGRYFGGKMITAAYVPLP
TYHNLFPESATATQLLVPPARR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggacgacctggacatcgaggcgatgctagaggctccattcaggaaggaggac
gggaagaaccagagccctgaaggacaggaggagcgcagcaagaggaagaagcgcagccgc
agcagagacaggaagcgcagccgcagtcgggacaagaagaggagccgcagccgcgaacgt
aaaggcagccgcagccgcgaccgacgcaggagccgcagccgagagcgcaggcgcagccgc
agccgagagcgggggggccgctacaaagaccaccacaagcaccgcagacggtcgaggagc
aagagtccaatcaggaaggagaaaagcccgcccaggctgccactggacaacttgaccccg
gaggaacgggacgcccgcaccgtgttctgcatgcagctggcggcccggattcgaccccgt
gacctggaggagttcttctctgctgtagggaaggttcgggatgtgaggatgatctctgac
aggaactcacggaggtcaaagggcatcgcctacattgagtttgtggaggccagctctgtt
cctctggccatcggcctgacgggtcagaggctgctgggggttcccatcatcgtccaggcc
tcacaggcagagaagaaccgagctgctgctgctgctgcagccaacagccttcagaaggga
tcgtttggccccatgcggctctacgtcggctcactgcacttcaacatcacagaggagatg
ctgagagggatctttgagccgtttggacggattgaaaacatccagctgatgatggacagc
gagacgggccgatctaaaggcttcggcttcatcacgttcgcagacgcagaatgcgctaag
aaggcgctggagcagctgaacggcttcgagctggcgggccggcccatgaaggtgggtcat
gtgactgagcggaccgacgccgccgccgcttcctccttcctggacaatgacgagctggac
cgatccggcgtggacctgggaaccacggggcggctgcagctgatggcccggctggctgaa
ggtaccggcctgcagatccctcctgccgctcagcaggcgctgcagatgagcggcgccatc
gccatcggcgcgctggcggccgtgtcagctgccatgaatccacctctgaccatgaacatg
agcactccggcgctgaacctgccgtctcagccgctcgccactcactgcttccagctgtcc
aacatgttcaaccccaacagtgagaacgtgctgggctgggagctggacatccagcacgac
gtcatcgaggagtgcaacaaacacggaggagtcgtccacatctacgtcgacaagaactca
gccgaggggaacgtttatgtgaagtgcccgtccatcccgtctgccatggccgccgttaac
gctctgcacggcaggtactttggaggtaaaatgatcacagcggcgtacgtccctctgccc
acctaccacaacctgttcccagagtctgccactgccacgcagctgctggttccaccggcc
aggcggtga
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