KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129356302
Entry
129356302         CDS       T09758                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129356302
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprl03019]
    129356302
   03036 Chromosome and associated proteins [BR:pprl03036]
    129356302
Messenger RNA biogenesis [BR:pprl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     129356302
Chromosome and associated proteins [BR:pprl03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     129356302
    COMPASS/SET1 complex (yeast)
     129356302
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_SPT8 NBCH_WD40 PAC11 Beta-prop_ACSF4 CFAP251_N Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_Nup120_160 ASA1 PEP5_VPS11_N Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_SCAP Beta-prop_WDR19_1st RMC1_N
Other DBs
NCBI-GeneID: 129356302
NCBI-ProteinID: XP_054881866
LinkDB
Position
Unknown
AA seq 315 aa
MKITDSLLRSFKVARIYRLNSEKVNCVDYSSNGEHAVSSSDDDSIVLYDIQEGKPFSTLY
SKKYGVDLIRFTQREAQTVVFSSNKLDDTIRYLSLTDNKFIRYFPGHTARVTALSMSPVD
ETFISSSLDKTIRIWDLRSPNCQGLTDPLGKPVCSFDPDGLVFAAGVESQAIKLYDIRAF
DKGPFACFEARLNRVCDWTGLKFSNDGKLILICTNGGAVRILNAFSGSVLHTFSGYNNNK
GITLEACFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDGKHPGPINTLQFNPRYMTFAS
ACTNTSLWLPCVDDL
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagatcacggacagcctgctgaggagttttaaagtcgccaggatttaccgcctgaat
tcagagaaagttaactgtgtggactacagctcaaacggagaacatgccgtctccagcagc
gacgacgactctatcgttttatatgacatccaggagggaaagccgttcagtactctgtac
agcaagaagtacggggtggatctgatccgcttcacgcagagggaagcccagactgtggtc
ttcagctccaacaagctggatgatactattagatatctgtcgctcactgacaacaagttt
atccgatatttccctggtcacactgcaagggtaacggcactctccatgtctccggtggac
gagacgttcatctccagttcgttggataagacgatccgcatctgggatctgcgatctccc
aactgtcaaggtttgaccgatcctttggggaaacctgtgtgttcatttgacccagatggg
ctggtttttgcagctggtgtggaatcacaggccatcaaactgtacgacattcgtgctttt
gacaagggtccctttgcgtgctttgaggccagattaaaccgcgtctgtgactggactgga
ctgaaatttagtaacgatgggaagctcattctcatttgcaccaatggaggcgccgttcgc
atcctgaatgccttcagtggatcggtgctgcacactttttcaggttacaacaataacaag
ggcatcaccctggaggcctgcttcaccccagactcacaatttgtcatgattggttcagag
gacggaagagttcatgtttggagtactgaaagtgggatgaaggtggccgtgttggacggc
aaacatccaggccctatcaacactctgcagtttaaccccagatatatgacgtttgccagc
gcctgcacaaacacgtctctttggctcccgtgcgttgatgacttatag

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