Poeciliopsis prolifica (blackstripe livebearer): 129356425
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Entry
129356425 CDS
T09758
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129356425 (ddx19b)
03015 mRNA surveillance pathway
129356425 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129356425 (ddx19b)
Enzymes [BR:
pprl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129356425 (ddx19b)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129356425 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
129356425
NCBI-ProteinID:
XP_054881986
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MASESWAQAVDEQEAAAESISSLQIKEKPEENGTVSNATNSSSGAAKSEAEGDAKPADDD
DKEDKAAQSLLNKLIRNNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYAMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKYPQCLCVSPT
YELALQTGKVIEQMGKYYPEVKLVYAIRGNKLERGSKLQEQIVIGTPGTMLDWCNKFRFI
DPKKIRVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEESVWSFAQRIVPE
PNIIKLKREEETLDTIKQYFVLCNSREEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQDHFNKKIERLDTDDL
DEIEKIAN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagagtcttgggcgcaggccgtggatgagcaggaagccgcggcagaatcgatt
agtagtcttcagataaaagagaaaccagaagaaaatggtaccgtttcaaatgccacaaac
tccagtagtggggctgcaaagtcagaagctgaaggtgacgccaaacctgcagatgatgac
gacaaggaggacaaagcagcacaatcgctgttgaacaagctgatacggaataatctcgta
aatacgacaaatcaagtggaagttctccagaaggatccaaactccccactatactctgtg
aagtcctttgaagagctacgactcaaaccacagcttcttcagggtgtgtatgccatgggg
ttcaatcgaccatctaaaatccaagagaccgccttacccatgatgctggcagagcctcca
cagaacctgattgctcagtctcagtcagggacaggaaaaacggccgcctttgtcctggca
atgctcagccacgtcgaccccaacaacaaatatccccagtgcttgtgtgtgtcaccaaca
tacgaactggcacttcagaccggcaaagttatcgaacagatgggcaaatattatcctgaa
gtcaaattagtctacgccattagagggaacaagttggaacgaggcagtaaactgcaggaa
cagatagttattgggacacctggtacaatgctggactggtgcaataaatttcggtttata
gatcccaagaagatcagagtgtttgtgttggacgaagccgacgtcatgatcgccacgcag
ggacaccaggaccagagtatccgaatccagaggatgctgccgaagaactgccagatgttg
ctgttctcagccacgtttgaagagagcgtttggagcttcgcgcagcgcatcgtgcccgaa
cccaacatcatcaagctgaagagagaggaggaaactctggacaccatcaagcagtacttt
gtgctctgcaatagcagagaggagaagttccaagctctctgtaacatctatggagccatt
accatcgctcaggccatgatcttctgccatacgaggaaaactgcaggttggcttgctggg
gagctgtccagagaaggccaccaggtggcgctgctcagtggagaaatgcaagtagagcag
agggctgctgtcatagaccgcttccgagatggaaaggagaaagtcctggtaaccacaaat
gtctgcgctcgaggcattgatgtggagcaggtttctgtggtgatcaatttcgacttgcca
gtcgacaaagatggtaatcctgacaacgagacatacctgcacaggattgggcgtaccggc
cgatttgggaagaggggactggccatcaacatggtggacagcaagatgagcatgaacatc
cttaacaggatccaggatcatttcaataagaaaattgaaagactagatacagatgatctg
gatgaaattgagaaaattgccaactaa
DBGET
integrated database retrieval system
