Poeciliopsis prolifica (blackstripe livebearer): 129356470
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Entry
129356470 CDS
T09758
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129356470 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129356470 (runx1)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
129356470 (runx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
129356470
NCBI-ProteinID:
XP_054882034
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MNPGTFASSGPLSWAMYLMRKGHTSNGLFDPAPGRRYTPPSTSLASGGKMAEALPLGAQE
AGGGATVMGKFRIADHSMAEVISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKLVT
LGDIPDGTLVTVMAGNDENYSAELRNATAVIKNQVARFNDLRFVGRSGRGKSFTLTITVF
TNPPQVATYQRAIKITVDGPREPRRHRQKLDEVKPGSLAFSERLTELEQLRRSSIRVTPP
HNHHHQQSANNHQSAVLTSATFSSPPHSGLTADSRQIQSSPSWSYDQPYPYLGQITTPTV
HTTAPLSPGRSSLGDLSSRLTGPDLTAFGDPRMALERPFSSLPSLPDSRFSNPRVHYPPT
GAAFTYTPTHNPVSNGAISITMATAMATTQTGRYHTYLPPPYPANTPHQAQNGPFQSTSS
PYHLYYSATTGSYQFSMMAGGGGGSDSHSPPRILPPCTTASTGSSLLHPSLPNQNEGVGV
EVESSHSSSPANMVAAEAVWRPY
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagggacattcgccagctctgggcccttgtcctgggccatgtatctgatgagg
aaaggccacacgagcaacggactctttgatccagcccctggtaggcgatacactcccccc
tccacttcccttgcctcaggggggaaaatggccgaggctttgcctctaggagcccaggag
gctggtggaggggccactgtgatgggcaagttccgcatagcggaccacagcatggctgaa
gtgatttctgatcatccaggagagctggtaaaaactgacagcccaaatttcctctgctct
gtcctgcccactcactggaggtgtaacaagactcttcccattgcttttaagttagtgacc
ctgggcgatattcctgatggtactttggtaactgtgatggctggaaacgatgagaactat
tcagcagagcttcgcaatgccaccgcggtgatcaagaatcaagtggcccgattcaatgac
ctgcgatttgtcggccggagcgggagaggaaaaagtttcactctcacgatcacagtgttc
accaaccctccccaagtggctacatatcaaagagctatcaaaatcacagtggatggtccc
agagagccacgacgtcatcgtcagaagttggacgaggtcaaacctggatcattagctttc
tcagagaggcttacagagctggaacagctgagaaggagctctatcagagtaacgcctcct
cataatcatcatcatcagcaatctgcaaacaaccaccaatctgcagtcctcacttctgca
acattttccagccctccacactctggactaactgctgattccagacagatacagtcttct
ccatcctggtcctatgatcagccttatccctaccttggtcagataactactcccactgtt
cacacaactgctccactttcacctggtcgctcttctcttggtgacctgtcctcaagactc
acaggtcctgaccttacagcctttggtgaccccaggatggctttggagcggccttttagc
tcccttccctcactgcccgactctcgattctctaaccctcgggtgcactatcctcctaca
ggagctgcattcacatacacgccaacccataatccagtctctaatggtgccatcagcatc
actatggccacagccatggcaaccacccaaacaggacggtaccatacatatttgcctcca
ccgtaccctgcaaatacccctcaccaagctcagaatgggccgttccagtctacttcatct
ccataccacctgtactactcagccaccactggttcataccagttctctatgatggccggg
ggaggaggcggcagtgactcacattctccacctcgtatcctcccaccttgtaccactgca
tccacaggttcttctcttttacacccttctttgcctaatcagaatgagggagtgggtgtg
gaggtggaatccagccacagtagctccccagcaaacatggttgctgctgaagctgtatgg
agaccatattga
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