Poeciliopsis prolifica (blackstripe livebearer): 129356709
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Entry
129356709 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 54-like
KO
K10654
tripartite motif-containing protein 55
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129356709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129356709
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129356709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
MC2
Zn_ribbon_FGT1_2
Caud_tail_N
Motif
Other DBs
NCBI-GeneID:
129356709
NCBI-ProteinID:
XP_054882245
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MDGLEKQLVCPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPYLSSRTGATMTSGGRF
RCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQGSTSKPEPEKKQEPMCEEHPDEKINI
YCITCSAPTCSLCKVFGQHRDCEVAPLSQVFASQKAELTDCISLLVGNNERIQAIVSQLD
ETCRAVDENGRRQKSRVCETFDRLFXLLEEKKGEMTVSINCEQEEKLDYIRSLNRKYSEH
LEETAKLLETAIQTMDEPEMAVFLQSANPLLQKLLQFTDTXHLDNVQPGYENMDHFTVNF
DLQRRALADVDFIKLDDDESEDEVEARGQLHVTPAAANEQLALSQPKSPAPSSSVPQAPP
PTHRPTTSSAPQSDHQNESEDKDGPKHVFSFSWLNQK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggacggcctggagaagcagctggtgtgtcccatctgtctggagatgttctccaagccg
gtggtcatcctgccttgtcaacacaacctgtgcaggaaatgcgccaacgacgtgtttcag
gcatccaatccctacctgtccagcaggaccggcgccacgatgacgtcaggcggacggttc
cgctgcccctcctgtagacacgaggtggttctggaccggcacggcgtctacgggctgcag
aggaacctgctggtggagaacatcatcgacatgtacaagcagggcagcaccagtaagcca
gaacctgagaagaagcaggagccgatgtgtgaagagcatccggacgagaagatcaacatt
tactgcatcacctgcagcgcccccacctgttcactctgcaaagtgttcggacaacacaga
gactgcgaggtggcgccgctgagccaagtattcgcaagccagaaggctgaactcacggat
tgcatctccttgttggtcgggaacaacgagcggatccaagccatcgtcagccagctggat
gagacctgcagagctgtggacgagaacggccggcggcagaagtccagggtctgcgagaca
ttcgaccgcctgtttntgctgctggaggagaagaaaggcgagatgacggtcagcatcaac
tgcgagcaggaggagaaactggactacatccgcagtctgaacaggaagtacagcgagcac
ctggaagagactgccaagctgctggagactgctatccagaccatggacgagcctgagatg
gcggttttcctccagtcggccaaccctctgctgcagaagctgctgcagttcacagacacg
ntccacctggacaatgtccagcctggttatgaaaatatggatcacttcaccgtaaacttt
gacctccagaggagggcgctggcggacgttgacttcatcaaacttgatgatgatgagagc
gaagacgaggtggaagccagaggacagctgcatgtcacacccgcagcagccaatgagcag
ctggctctttcccaaccaaagagccccgccccctcatcgtcagtcccgcaggccccgccc
cctacgcatcgccccacaactagctccgcccctcagtccgatcaccagaacgagtcggag
gacaaagacggacccaaacacgtcttctccttcagctggctcaaccagaagtaa
DBGET
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