Poeciliopsis prolifica (blackstripe livebearer): 129357041
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Entry
129357041 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11-like
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
129357041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129357041
Membrane trafficking [BR:
pprl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129357041
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
129357041
NCBI-ProteinID:
XP_054882538
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MSLRQPTSTLDSPFAAWLNSFTTGDSERRAPASQQREVTIDESSSPGLVHRCVVVQKDQL
GFGFTVCGERVKLVQNVRPGGAAVKAGVHEGDRIIKVNGSPVSTMTHQEVVKLIKSGPHV
ALTLQGPPTSATSVPLEPLPSDPTPNQRSSLAGEGPPPPPPLPSGLGSTPSQRITGPKPL
QDPEVQKHASQILRKMLEQEEAELQDFMEEFSKNPSPSLEERIESAKRRAHQVRVKIQNQ
EGTGSESVTNYIQAGEGRLSMDSSEGDLEAFESPSSSPSLPFRTPCHRRQNSDTHTLSDT
GVKAQIISPEDEDEDGDGYAFNEMDGPFQDIELLKSRPAHMTVFMRYVFSQLLDPNPLLF
YLSVEAYLGSSPKDARALAPQICSHFLDPDAPLKIKVREEFLTEIENRLHAQEDIRGPLS
ELQQQVLPDIQDQIQDYRNKQMIGLGSLFGEGDLLQLDGDPLKEKHVVDRQVAALWEILS
KHEEDRSSPLASAVLLYLRHSGIKLRDSKVFLGLSTEKDKWLAFLKPKKTSSTKKEKDGE
DKKKNPILKYIGKPRSTSQSTFHVPLSPTEVRSGSVRNIIQQFENHTELPGEEDGDAVDP
QRLSSSSLGEEGMDSPTVLVRLGRSGSLKAQGEDRRRGTVSSGDSVPRSRSDVDMEDCEE
RDQPGLRLLQHSASSSASSNSARSLENPTPPFTPRSRRRSVDSQLALLPDAAVLEDEVCD
GQNWRDTVPPELLATLSPREVERQAVIYELFTTEVSHLRTLRVLDKVFYRKMRSVLNSEE
LACIFPNLPQVYELHASLCEEMKKRRESPIVQNIGDVMLAKVEGAAGNEFQEQASQLCCQ
QTQALELIKNKKRKDQRFAQIIQECEASPQCRRLQLKDLLVSEMLRLTKYPLLLDKIIKY
TEGGSSDLPSLQRAQACCRGILKAVNEDVRETEHRQRLSQYQRRLDVAPQLKSLDLTAKR
MIHEGPLVWKIGKDKQIEIQALLLSDCLVLLQKGPDDRLLLRYPSRWMGGGGVVIADNKT
SFSPLVKLDSLLVRSVATDKKALYIISTKETQIYELAAGSPSEKDTWKDLLEKTIKALDP
QSNHGSLPVSSSSLRSSSPALTEVRSAEEQSEFIGSHGTADDGMLGDHLADQPEANSSEE
ERAAGVAEAALHDVETLRRLLLPDVDEDRRSHDTDDTPTNTMSNGNADRRRQDSLETVLD
LCLSEPRPRQPEAPPPESRQTSAKVVRRAVVAGAPPPPPSPSAPDGTAGDVSLPSDLSSQ
SRGEADTQGNLFYLVMPIDQGESVTDDLPDPPTPTASHFPQPPQDVSSSQTQPDEEKEEE
EVVAASCPEFIQSDSETMQTEVELEEGDNDNDGEDEETGPAAQQSHVIRNADEIFLTIEG
LMSKLHKLKEIEKAHHKLLDSLRDPSLSQESEDQPCCSATVSRTPSMDRSSGDGKEGNPG
DLRILSTGF
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccgccagcccacatccaccctggacagcccttttgctgcttggctcaacagt
ttcacaactggcgattcggagcgcagagcccctgccagccaacagagagaggtgactata
gacgagagttcaagtcctggtctggtccacagatgtgtggtggtgcagaaggaccagctc
ggtttcggcttcaccgtctgcggagagagagtcaagcttgtgcagaacgtccgaccaggt
ggcgctgcagtcaaagctggggtccatgagggggaccggatcatcaaggtgaatggttca
ccggtctccaccatgactcaccaggaagtggtaaagctcataaaatccggaccgcacgtc
gccctaacactacaaggaccgcccacgtctgccacctccgtgcccttggagcctctccca
tcagaccctacgcccaatcagaggtcttccctggctggggagggtccgccccctcctcca
cctctaccctccggactgggcagcaccccatcacaaagaatcactggacccaaaccgcta
caggatccagaagtgcaaaaacatgcaagtcagatactcaggaaaatgttggagcaggaa
gaggctgaactccaggacttcatggaggaattttcgaagaacccgtcgccgtcgctggag
gagcggatcgagagcgccaagaggagagctcaccaagtccgggtcaagattcagaatcag
gagggaacgggatcagaatctgtcacaaactacatccaagcaggagaaggacggctgtcg
atggactccagtgaaggagacttggaggcctttgagagtcccagctcctccccctcatta
cccttcaggaccccctgtcaccgacgccagaactcggacacacacaccctgtctgacacg
ggtgtcaaagcccagatcatcagccctgaggatgaagatgaagatggtgatggttatgcc
ttcaatgagatggacggtcccttccaggacatcgagttgttgaagtcacggccggcacac
atgacggtgttcatgagatacgtcttcagccagctgctggacccaaaccctctgctgttc
tacctgtctgtagaggcgtatttaggctcctcccctaaagacgcccgcgcactcgcgcct
cagatctgctcccacttcctggatcctgatgctcccttgaaaatcaaagtgcgtgaggaa
tttctaacagaaatagagaaccgccttcacgcccaggaggacatcagagggcctctgtct
gagctgcagcagcaggttctgccggacatccaggaccagattcaagactacaggaacaag
cagatgatcggtctgggctccctgtttggagaaggagatctgcttcagctggacggagac
cccctgaaggagaagcatgtggtggacagacaggtcgccgctctctgggagattctatca
aagcatgaagaggacagaagctctcctctggcctcggctgtcctcctctacctgcgacac
tccggcatcaagctcagagactccaaggtcttcctcggcctgagcacggagaaggacaag
tggctggcttttctaaaacccaaaaagacaagcagcacaaagaaagagaaagatggagag
gataagaagaaaaaccccatcctgaagtacatcggcaaaccccggagcacatctcagtcc
acattccacgtcccgttgtcacccacagaagtgcgttccggcagcgtgaggaacatcatt
cagcagttcgagaaccacacagagcttccaggagaggaggacggggatgctgtggacccc
cagaggttgtcctccagcagcctgggagaggaaggcatggacagtcccacggtcttggtg
cgtctggggcgcagcgggtcgctaaaggctcagggtgaagaccgccggcggggcactgtc
tccagcggggactcggtgccccgctctcgcagcgacgtggacatggaggactgcgaggag
agggaccaaccgggcctccggctgctccagcacagcgcctcgtcatccgcgtccagcaac
tccgctaggtctcttgagaaccctacacccccattcacccctcggtccagacgcaggagt
gtggactcacagctggccctgctgccagacgccgcggtgctggaggacgaggtgtgtgac
ggtcagaactggagggacacggttcctcctgagctcctggcgaccctcagccccagggaa
gtggagcggcaggccgtcatttacgagctgttcaccactgaggtgtcccaccttcggacc
ttacgggttcttgacaaggttttttaccggaagatgagatctgtgctgaactcagaggag
ctggcctgcatcttcccaaacctgcctcaggtctacgaactccacgcgagtctttgtgag
gagatgaagaagcgaagagagagccccatcgttcagaacatcggagacgtcatgctggcc
aaggttgaaggcgcagctgggaacgagttccaggagcaggcgtcgcagctgtgctgccag
cagactcaggctctggagctcatcaagaacaaaaaacggaaggatcaacgcttcgcccaa
atcatccaggagtgcgaggcgagtcctcagtgtcggaggctgcagctcaaagacctgctg
gtgtctgagatgctgagactcaccaagtatcctctgctgctggacaagatcatcaaatac
acagagggcgggtcatcggacctcccgtcgctgcagcgcgcccaagcttgttgccgaggc
attctgaaggcagtcaacgaggacgtgagggagacggagcatcgtcagcgcctcagtcag
taccagcgccggctggacgtcgcgccgcagttgaagagtctggacctcaccgcgaagaga
atgattcacgaaggtcctctcgtctggaagatcggcaaagacaagcagatagagatccaa
gcgctgctgctgtcggactgcctggtcctcctccaaaaaggccccgacgaccggctgctg
ctccgttatccgtcccgctggatgggaggaggaggagtggtcatcgccgacaacaagacc
tccttcagtcccctggtgaagctggactcgctgctcgtccgctccgtggctacggacaaa
aaagcgctgtacatcatcagcaccaaagagacgcagatttacgagctggcggcggggtcg
ccgtctgagaaagacacctggaaggatttacttgaaaagaccatcaaagctttagatcca
cagagcaatcacggatcacttcctgtgtcttcttccagcctacgcagcagttcaccagcc
ttaactgaagtccgttctgcagaggagcagtcggagtttatcgggagccacggcaccgct
gacgacggcatgctgggtgaccatctcgccgaccaacctgaagccaacagcagcgaagag
gagcgggcagcgggcgtggccgaagcggctctgcacgacgtggaaacgctgcggcggctc
ctgctgccggacgtggacgaggaccggaggagccacgatacggacgacacccccaccaac
accatgagcaacgggaacgccgacagacgacggcaggactccctggagaccgtcctggac
ctctgcctgagtgagccgcggcccaggcagccggaggctccgcccccagaaagcaggcag
accagcgccaaggtggtccggcgagctgtggttgcgggtgctcctcctcctcctccttct
ccttctgcccctgatggcaccgccggcgatgttagcctcccctccgatctgtcgtcacag
tctagaggcgaggccgacacgcaggggaacctcttctacctggtgatgccgatagaccaa
ggagagagcgtcactgacgacctccctgaccctcctacacccaccgccagccactttcct
caacctccacaggacgtgtcgtcatcacagactcaaccggatgaggaaaaagaagaagaa
gaagtagtggcggccagctgcccggagttcatccaatcagattcagaaactatgcaaacg
gaggtagagttggaggaaggcgataatgacaatgacggtgaggatgaggaaacgggccca
gcggcacaacagagtcacgtgatcagaaacgcggatgagatttttctcaccatcgagggc
ttgatgagcaagttgcacaagctgaaggaaatcgagaaggcccatcacaagctgctagac
tctctcagagatccctccctgagccaggagtcggaggaccagccgtgttgctctgcaacc
gtctccaggacgccgtccatggaccgcagctcaggagacggtaaggagggaaacccggga
gatctcagaatcctctcaaccggattctga
DBGET
integrated database retrieval system
