Poeciliopsis prolifica (blackstripe livebearer): 129357363
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Entry
129357363 CDS
T09758
Symbol
uimc1
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-A complex subunit RAP80
KO
K20775
BRCA1-A complex subunit RAP80
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129357363 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129357363 (uimc1)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
129357363 (uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
CpG_bind_C
Motif
Other DBs
NCBI-GeneID:
129357363
NCBI-ProteinID:
XP_054882633
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MRGRGRHSSSPSSATQQQSRMALRKKLAQNVSSESQQDENTQEDKASTDTESKDELSSLL
RSTSLAREKRQRERKNHSRRKEMTEEEEMDLALQLSKQEASNTALRQQQEDENVMKAIQE
SMVNQTQPGLKSPNEHLLDGVPQGTGSRQKLSFSNGERMPEEGGMNSGAVGPGDEIITRR
KKRRKQAGSPLMEMPAFSQIPKVSSQNSPSITESFSAHLDSPQSSDSTDIEDSQLQMSPV
FPLTSCRADVHVNRLNLDLVETCKSSGFVLCSQDSLISTQKSAQPRSPVFPQSNPIFCPK
SPVFPGDDMCRESHLEQSPTFVKSPVFGRTADCSNHPACENTELSCSSQESSNPTVRSRS
PQSPVFHKSPSGQSSFRKDPXRGQVERSTSPAELQRTDQQLRASDHDQRPFDYRKDIKSG
GSPTAECNRHLPKSEEVTENCEGWTSAETDLTSDMTLIWSEQEEDDITPVGSPSPVFPVE
KTAVPADNQLGSSPNHVLAASQEPSGSYCSLKPQKCLSPLPTSALHPVSRQEEVRRASPQ
RGEPSDRQTIHYYWGVPFCPRGLDPDTYTKVIVAQIEVYEKSLKEAQRGLLRKAEWGEAI
QPEPQKSMSPETSAGSPQPCVSRRRGLRLRGSKRSEIADFLPEEEEEEERKDEEEEQQEK
EEEGNKESDEVQMDTDDCDVCPETQLSDDGTKDLSLDADAEAQPPQKDPELPEIKMILRD
DSPIRDESQEPEPNLKNSRMEGNASGCAEDAGGETARKVKKVKSRKDPEVEKMEDPEVER
SECPELEAAVVPHSPEASVDCPICQGSFPVSEIEMHAAYCDGEVAVIDQRAESQGFQDLL
KPRRKRMKRTEVVSEETSQASDLCRNQEKCYICQKSVPLRDYSRHIELCLQRGTVSRKGN
LLSALEKTESRDSGAGPSGSKLQPEAVIDLRDDDDEEVSAYRISNSPIRSFTPISEATGC
LVDFRKQQRPKKPIQRRK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagaggaagacactcttcatcaccgtcgtcagcgactcagcagcagagcagg
atggctctgaggaagaagctggcccagaacgtttcctctgaaagccaacaggatgaaaac
acccaggaggacaaagcttctaccgacacagaaagcaaggatgagctctcgtctttgctt
cgatcaacatcattagcacgagagaaacgccaaagggagaggaagaaccactccagaaga
aaagagatgactgaggaggaggagatggacctggcgctccaactcagcaaacaggaagcc
agcaacacagcactgagacagcagcaggaggatgagaatgtgatgaaggccattcaggag
agcatggtcaaccagacacaacctggtctgaagtccccaaatgaacatctgcttgatggt
gtcccccagggcaccggctctcgacaaaaactctcattctctaacggggagaggatgcca
gaggagggtggcatgaactcaggagctgttggaccaggagatgaaattatcaccaggaga
aaaaagcggagaaaacaagctggcagtcctcttatggaaatgccagctttttcacagatt
ccaaaagtttcctctcagaattctcccagtatcacagaatcgttctccgctcatctggat
tctccacagagttccgactcaacggatattgaagactcccagctccagatgtctccagtc
ttcccgctgaccagctgtagagcggatgttcatgtcaatcgccttaacctggatctagtg
gaaacctgcaagagctcggggtttgtcttgtgttctcaggacagtttgatttccactcaa
aaatctgctcagcccagaagccctgtttttccccagagtaaccccatattctgtcccaaa
agtcctgttttcccaggagatgacatgtgccgtgaaagtcacctggagcagagccccacg
tttgttaagagtccagtttttggcagaactgctgactgctctaatcatcctgcctgtgaa
aatacagagctcagctgctcctctcaggaaagttcaaatcccactgtgaggtctcgctcc
ccccagagccctgtgttccataaaagcccctcaggacagtcttcatttcgtaaagacccc
ngccgaggacaggtggagcggtcaacgagccccgctgaactgcagaggactgaccagcag
ctccgagcttctgaccatgaccagagaccttttgactacaggaaggacataaagtctggc
ggctctccaactgccgagtgcaacagacatttgccaaagtcagaagaggtgactgaaaac
tgtgaaggctggacctctgcagagacagacctcacaagcgacatgacgctgatctggtca
gaacaggaggaggatgacattacgcctgttggttctcccagtccagtcttccctgtggag
aaaactgctgttccagcagacaatcagttgggatcatccccgaatcatgtattagcggct
tcccaagaaccatccgggtcatactgcagcctgaaaccccagaaatgtttgtcaccgctt
cccacctctgccctgcatcctgtgagcagacaggaggaggtccgcagggcgtcgcctcag
cgtggggagccttcagacagacagaccatccactactactggggggttcccttctgtcca
agaggcctggaccctgatacatacaccaaggtgatcgtggctcagattgaggtttatgag
aagagtctgaaagaagctcaaaggggtctgctgaggaaggctgagtggggggaggccatt
cagccagagccacagaagtccatgtcccctgaaacatcagctggatcacctcagccttgt
gtttctcgaaggagaggtctaagactgagaggcagcaaaaggagcgaaattgctgatttt
cttccagaagaggaagaggaagaggaaagaaaagatgaagaagaagagcagcaagaaaaa
gaggaagaggggaacaaggagagtgatgaagtgcagatggacactgacgactgtgacgtt
tgtccagaaactcaattgagtgatgacggcactaaagacctgagcttggatgctgatgct
gaagcacagcctccacagaaagatcctgagctgcctgagatcaaaatgatcctcagagat
gattctcccatcagagacgagtctcaggagccagagccaaatttgaaaaactcaagaatg
gagggaaacgcctcaggttgcgctgaagatgccggaggagagactgcacgaaaggttaag
aaagtcaagagcagaaaagatccagaggtggagaagatggaggatccagaggtggagaga
tcagaatgtcctgaactggaagcagccgtcgtccctcacagccctgaagcctctgtcgac
tgccccatctgtcagggatcgtttcccgtgagtgagattgagatgcatgcagcgtactgt
gatggagaggtggccgtgatcgaccagagggctgaaagtcaaggttttcaagacttactg
aaacctcgtaggaagagaatgaagagaacagaggtggtgtcggaggaaaccagccaagcc
tctgatctttgcaggaaccaggagaaatgctacatctgtcagaaatctgttcctctaaga
gattacagccgacatatagagctctgccttcagcgcgggacagtgagcaggaagggaaat
ctcttgtcggctctggagaaaacagaaagcagggactcaggtgctggaccatcaggttcc
aaactccaacctgaagcagttattgatctaagggacgatgatgatgaggaggtttcagcg
tacagaatcagtaactctcccatcagatccttcactcccatctctgaggccaccgggtgc
cttgttgacttcaggaaacagcagcgacccaagaagcccattcaaagacggaaatga
DBGET
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