Poeciliopsis prolifica (blackstripe livebearer): 129357725
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Entry
129357725 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129357725
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
129357725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
129357725
NCBI-ProteinID:
XP_054882750
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MGQKDHVEAGAVLDLAPDLEYLHVAGADRQAGGLYGPLAMEEQAESFTTTAAAGSPPEES
GGSDGECKAAPTATADSDGGEVSYTSSKNTHQPLCRTPCVDLGTEGPPEPPSDPSGEPEQ
EPAEPPTESPTPAPEPKLAGKNYQAKLEFALKLGYSEETVHQVLSKLGPDTLINDILGEL
VKLGTKPDSEQPAGILTSTSSSSSSSXCGCPDVLDGQRSDSPLPPESVCDQDNLRPIVVD
GSNVAMSHGNKEVFSCQGIQLAVEWFVERGHQEITVFVPAWRKEQSRPDAPITDQEILRR
LEKEKILVFTPSRRVQGRRXVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFID
ERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPILPEQKKQPCPYGKKCTYGHKCKYY
HPERGAQPQRAVADELRASAKSCVPSKNQGDAGLVKSHSVPAGTIEAKNGAPKRQSDPSI
RALSYSDAEEKLLVKSRLESQKSNIGGSSSSSSTSSISCSGGLAVSSALAGLSPGFSLLQ
DQQPRSGTHLPAPSHDLYPHCETPDLSYYSVTRAYSGLSLSSRRSPDCRYPNDPELRHGS
MGSAGSECGSESSISCGSSDSYSDRSCPGCPPESLLEESVHFPNPAGRLYPHHIASNHEL
CSLHATDYPAIQHNHTXNPAVHPYHLNAACGQSCVHEQPPPEGXPKRPLYPLPPHLQHQP
LAARSSCPGDYHSLPQSNRQAPGSPIGRCLAPTRSESVSDSHLYEHLSASHHHHRPKTLP
SWETYYRQPSLPPSRFEPSAYQSLPDTHQSSWHPAPWPQEGYSSSHPALHPSPTRYLGHP
PPPALSSHPPYPRHSAHLALPSHPPPPYGPQHPESPVHSRYEDMREKVYIDLCNIFPSEL
VRRVMARSLHVTDPQQLAAAILAEKAQSGY
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcgggagcagtcctcgacctggcgccggacctggag
tatctccacgtagcaggggccgaccggcaggctggcggcctttacggaccccttgctatg
gaggagcaggcggagagcttcaccaccaccgccgctgctggttcccctccggaggagagc
ggtgggtctgatggcgagtgcaaggcggcgccgacagccacggcagactcagacggagga
gaagtcagctacacttccagtaaaaacacccaccagccgctgtgccgcacaccatgtgta
gatctgggcacagaggggcctccggagcctccgtcggatccctcaggagaaccggagcag
gaaccggccgagcctccaaccgaatcccccacaccggcaccagagcccaagctggcgggg
aagaactatcaggcgaagctggagttcgccttgaagctgggttactctgaagagactgtg
caccaggtgctgtccaagctcggacccgacaccctcatcaacgacatactgggcgaattg
gtcaaactgggcaccaaacctgacagcgagcagccagcgggaatattgacctctacctca
tcgtcttcatcatcctctnnttgcggctgccctgacgtgctagacgggcaaagatcggac
tctccactgcccccggagtctgtctgtgaccaggacaacctgcgaccgatcgtggtggac
ggcagcaacgtggccatgagtcatggaaacaaggaggttttctcctgtcagggcatccag
ctggctgtagagtggtttgtggagcgcggccatcaggaaatcacggttttcgtgcctgct
tggaggaaagagcagtcccgccctgatgctcccataacagatcaggagatcctgcggcgc
ctcgagaaagaaaaaatcctggtcttcaccccctcacggcgtgtccaaggccggcgtnng
gtctgttatgacgatcgcttcatcgtcaagctagcttatgagtcagatggcatcatcgtc
tccaatgacaactacagagacctggctaatgaaaagcctgagtggaagaagttcatagac
gagcggctcctcatgtattcctttgtcaatgacaaatttatgcctccagatgaccctctg
ggacgtcacggtcccagcctggacaacttcttgaggaaaaggccaatcctgcctgagcag
aagaaacaaccctgtccatatggaaaaaagtgcacgtatggtcacaagtgcaagtactac
caccctgagagaggagctcagcctcagcgcgccgtggccgatgagttgcgtgccagtgcc
aagagctgcgtcccctccaagaaccagggggatgctggactggtgaagagccacagtgtg
ccagctggcaccatcgaggcaaaaaacggtgccccaaaaaggcaatcggatcccagcatc
cgagctctgtcgtacagtgacgctgaggagaagctactggtgaaaagcagactagaaagc
cagaagagcaacataggtgggagcagcagtagcagttctactagcagcatcagctgtagc
ggaggtttagctgtgtcctcagccctggcaggactgtcacctggctttagtctgttgcaa
gaccaacagcccagatcagggacacatctaccggcccccagccatgatctctaccctcac
tgtgagactccagacttaagctactactctgtaacacgggcctactctggcctgagcctc
tcctcccggcgaagcccggactgccgctaccccaacgatccggagctgcggcacggctcc
atgggctccgcgggttctgaatgtgggagtgaaagcagcatcagttgtggtagcagtgac
tcgtacagtgaccgttcctgtcctggatgccccccagaatctttattagaagaaagcgtt
catttccccaaccccgctggccgcctgtaccctcatcacatcgcttctaaccacgagctg
tgcagtctgcatgcgacagattacccagcaatccaacacaaccacaccnntaatccagct
gttcatccctaccatctgaatgctgcgtgtgggcagagctgtgttcatgagcagcctcca
ccagagggannccctaagcgacccctttaccctctgcctcctcacctccaacaccagccg
ctagctgcccgctccagctgccctggcgattaccactctctgcctcagtccaaccgtcaa
gcccctggatctcccattggccgctgcctggcccccactcgcagcgaaagcgtatccgac
tcgcatctgtacgagcatctctctgcgtctcaccaccaccatcgaccgaaaacgctgccc
agctgggagacttattacagacagccgtcactcccaccgtcgcggttcgagccgtcagcc
taccagagcctgccagatacgcatcagtcatcctggcaccctgcaccgtggcctcaagag
ggctacagctcgtctcacccagctctgcacccatccccgacacgttacctaggccacccg
ccgccaccagccctctcttcccaccctccttacccccgtcacagcgctcatctcgctctt
ccctcacaccctcctcctccgtacgggccgcagcacccggagtcccccgtgcacagccgc
tacgaagacatgagggagaaggtgtacattgacctttgcaacatcttcccttcggagctg
gtgaggcgtgtgatggcgaggagcctccatgtcacagacccccagcagctggctgctgcc
atcttggcagagaaagctcaaagtggctactaa
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