Poeciliopsis prolifica (blackstripe livebearer): 129358118
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Entry
129358118 CDS
T09758
Symbol
cdh4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129358118 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129358118 (cdh4)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Major cadherins
129358118 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Fibulin_C
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
129358118
NCBI-ProteinID:
XP_054882928
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MIAGRILLACTVLVGASSGSRAGQNLKPPCRPGFSQNFYTVIVPRDVLHGQSILKDTTLS
SKRVKFEDCQHSREVGFVSSDPNFSVRPDGSVYTEQEVANLSEPVQFMVTARGLHDPHIW
ETTVKLALAGHLHPLPLTKIGFEEMLSRVWESQPRVIKFSRRHQRGSSANSLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSKP
GSSVMQVMATDSDDSTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAAGLDREKV
SQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTGRTFSGEVQENKVNVVVTN
LTVMDRDQAHTPNWNAVFRIVSGDPSGHFTIRTNPITNEGMLTVVKPVDFEMNRAFMLTV
VVSNQAHLASDIQSSLQSTAGVTISVQDVNEPPVFPVNPKTIRFEEGVPAGTTLTVFAAQ
DPDHFIHQIVRYSKLSDPANWLKINRTNGQITTMALLDRESMYVKNNMYEATFLAYDNGK
SGSPQASGTGTLQIYLIDVNDNAPVLIPKEAQICERARPNSRINITASDADAEPNVGPFV
FELPSFPASIRRNWTISRLSGDYAQLRLRIPYLEAGVYVIPVIVSDSGNPPLSNRSMIRI
KVCPCDNNGDCSATGAVAAAGLGTGAIIAILICIIILLSMVLLFVVWMKRREKERQAKPL
LIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIISKPTGVRRVDERPVIAES
QYPVRPSVPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTSS
GDQDYDYLNDWGPRFKKLADLYGGGADD
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctggccgcatcctgctggcgtgcaccgtactcgtgggcgcatcctcggggagc
agggcgggccagaacctgaagcctccctgcagacccggcttctctcagaacttctacacg
gtgatcgtccccagagacgttctgcacggccagagcatcctcaaagataccaccctgtcc
agcaagcgtgtgaagtttgaggattgccaacacagcagagaggtgggctttgtcagcagc
gaccccaacttcagcgtgagacccgacgggagtgtgtacacggagcaggaagtagccaac
ctctccgagcccgtccagttcatggtgacagcgcggggactgcacgacccgcacatctgg
gagaccaccgtgaagctggcccttgccggacatcttcaccctctaccgctgacaaagatc
ggctttgaagaaatgctgtcacgggtgtgggagtcccaacccagggttatcaagttctct
cgaagacatcagagaggttcctctgcgaacagcttgaggcggcagaagagagattgggtc
atcccacctatcaacgttcctgaaaactcccgaggacctttcccacacatgcttgtcagg
atccgctcggatcaggataaggacgtcggcatccgctacagcatcacgggcgccggcgcc
gatcagcctccgagcggaatctacaacatagaccccatcagcggcaacatgttcgtcacc
cagcccctggaccgcgaggagagagcctcctttcacctgcgagcccacgcggtggacatg
aacgggaaccaggtggagaacccgatcgacctgtacatctacgtgatcgacatgaacgac
aacagacccgagtttcaaaaccaggtttacaatggctcggtggctgaagggtccaaacca
ggctcgtccgtgatgcaagtgatggccacggattcggacgactccaccacggccaacggc
atggtgcgctaccggatcctgtcgcagaccccccacagtcccatccccaacatgttcacc
atcaacagcgaaacgggagacatcgttaccgtggccgccgggctggacagggagaaagtg
tcacagtacaccatcatcgtccaggccacggacatggagggcaatctgaactttgggctc
tccaacacggccacggcgctcatatccatcaccgacatcaacgacaacccaccagaactg
acaggcaggacgttttccggagaggtgcaggagaacaaggtgaacgtcgtggtaaccaac
ctgactgtgatggacagggatcaggcccacacccccaactggaacgctgtctttcgaatc
gtcagcggcgatccgtcgggacacttcaccatccgcacaaatcccatcacgaatgaggga
atgctcacagtggtcaagccggtggatttcgagatgaaccgcgccttcatgctgacggtg
gtggtgtccaatcaggcccacctggcgagcgacatccagtcctcgcttcagtccacggcg
ggggtcaccatctctgtccaggatgtcaacgagccgccggtcttccccgtcaaccccaag
acgatccgtttcgaggagggcgtgccggcggggaccacactcacggtgttcgcagctcag
gaccccgaccacttcatccaccaaattgtcaggtactcgaagctctccgacccagctaac
tggctgaagatcaacagaaccaacggtcagatcaccacaatggccttgctggacagggag
tccatgtatgtcaaaaacaacatgtatgaagccacgttcttggcgtacgacaatggtaag
tctggttcgccccaggccagcgggactgggacgctccagatctacctgattgatgtcaac
gacaacgctcccgtgctgatacccaaggaggcgcaaatctgcgagcgagcccggcccaac
tccagaatcaacatcacggcttcggatgcagacgccgagcccaacgtcgggccgtttgtc
tttgagctgccttcgtttcctgccagcatccgccggaactggaccatctccaggctgagc
ggcgactatgctcagctcagactgaggattccttacctggaggcaggcgtctacgtgatc
ccggtcatagtgtccgactcggggaacccgcctttgtccaaccgctctatgatcaggatc
aaagtgtgtccctgcgacaacaatggggactgcagtgctacaggggcagtggcggccgct
ggcctcggcaccggagccatcatcgctatcctcatctgcatcatcatactgctgagtatg
gttctgctgttcgtggtgtggatgaagcgcagagagaaggagcggcaagcaaagcccctg
ctgatcgacccagaggacgacgtcagagacaacatcctgaagtatgacgaagagggaggt
ggagaagaagaccaggactacgacctgagccagctgcagcagccggagtcactggaccac
atcatcagcaagccaacaggggtgcgccgggtcgacgagaggcccgtgattgctgagtcg
cagtacccagtcagacccagcgtcccccacccgggggacataggagacttcataaacgac
ggtctgagggccgccgacaacgaccccaccgccccgccgtacgactccttgctggtgttc
gactatgagggtagcggttcgaccgccggctctgtcagctcgctcaactccaccagctca
ggagaccaggactacgactacctcaacgactggggtccgcgttttaagaagctggcagat
ctctacggcggaggagcggacgactga
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