Poeciliopsis prolifica (blackstripe livebearer): 129358313
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Entry
129358313 CDS
T09758
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129358313 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129358313 (nfasca)
Cell adhesion molecules [BR:
pprl04515
]
Immunoglobulin superfamily
L1 family
129358313 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Bravo_FIGEY
V-set
C2-set_2
Ig_6
Ig_4
Ig_DSCAM-DSCAML_C
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
129358313
NCBI-ProteinID:
XP_054883229
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MRPVGGREMLGKVGHAALTLLSLLLLWQEAAAIEVPLDPKIQQDLKQPPTIIKQSVKDYI
VDPRDNTIIIECEAKGNPVPKFSWRRNGRLFTIGKDPRVTMRKRSGTLEVGFRSGGRPED
YEGEYQCFASNDLGVALSNKILLRVSKAPLWPKEVLAPVPVTEGSPLVLPCNPPPGLPPP
LIFWMDSNMTPILQDRRVSMGLNGDLYFANVLVQDAHSDYSCNARFNFTYTIQQKNPFNL
KVQTTEPYNDTSYNASDPFGGRKVAETPPSFLSPEGSGSSKMVLRDEQLLLECIAAGLPT
PSIKWFKRGGDLPAQKVKFENFNKTLKILSVSEEDAGEYVCMADNRLGSIRHSIDVQVKA
APYWLDKPTNLVLAPEENGRLVCRANGNPKPNIQWLMNGEPINKITETPASANREVLGDT
IMFRGVQIGSSAVYQCNASNQHGYLLANAFVSVLDMAPRMLGPKNQLIKVIMNNRTFLNC
PFFGSPLPELRWFKNGQGSGLDGGQYRAHINGTLEIKRARKEDEGIYTCVANNMLGKAEN
QVQLEVKEPTRIIQAPTHQSVLRGSKASFHCKVVSDPSLPTKVTWTKDGERLDLGWRLKK
DEESLTIPSVTENDEGIYTCTVKSEIDQDSASARLTVLEDAFLNPSVFSALPPDRPDPPI
DLDLSDPSARSVRLTWIPGNERRSPVTEFLVQFEENHWEPGRWQDLSSFPGDLNSVILQL
APNVNYQFRVIAINSVGRSQPSQPSPRYKTTAAPPDAIPRDLRGWGSDKDNMEITWEPLR
DLEKNGPNLQYNVWWRRKDSGDNWTNVTTSESKHVVRYTETYVPYEMKIQARNELGSGPE
SNIVIGYSGEDKPADSPTELRVSKVSSTRANIHWKPVDLSSVQGEFKEYRLYYWREASLV
PGVVVSKEKMTTGFYTTVPEPSGILKDLVPYSKYKMFMVVANSRYESLPSNNVEFTTAED
VPDAPRFFRINRRSLDTLYLEWGKPLEPNGILVGYQLAYQRVNGSRLGPQQIETFRPNET
DFVLRLPDRNARYKFNLSALTKVGKGEVYAEESPHFTNEENFTDATDVVELTDATLSPVF
SPTPTPLPPTTIPPTTISITTPTPPPTPPPTPPPTTPPTTTTTTTTEATTPSTVPVLVTT
KRVDQNVLVTPRREIWNLTVVPDSYYANVNWSHNFPADSKFVLEVTLDSNKTVTVEEVKQ
PPVNLKALIAGEKYHLRVYSQELNSVSSKSVTFKTKAAHIDQVDIATQGWFIGLMCAIAL
IILILLIVCFIKRSRGGKYPSPGFLTGFTKYLVRDKKDLPLDPVDQKDQDGSFDYQNGSS
VRDRNENENSSDEDNKPLQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVK
KDKDETEGNESSEATSPVNAIYSLA
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgcggccagttggagggagagaaatgttgggaaaggttgggcatgcggccctgacgttg
ctgtcattactgctgctgtggcaggaagcggcagccatcgaggttcctttagatccaaag
atccagcaagacttgaagcagccccccaccataatcaaacagtcagtgaaggactacatc
gtcgaccccagagataacaccatcatcatagagtgtgaagccaagggcaacccagtgcca
aagttctcatggaggagaaacgggaggctgttcaccattggcaaagaccccagagtgact
atgagaaaacgctcaggaaccctggaggtaggattccgtagcggaggacgaccagaggac
tacgagggagagtaccagtgtttcgcctcaaatgacctcggagtggccctgtccaacaaa
atactgctccgtgtctccaaggccccgttatggcctaaggaagttctggccccggtgccg
gtgactgaaggctcccctctggtcctgccctgcaacccaccgcctggcctgcctcctcca
ttgatattctggatggacagcaacatgacccccatccttcaggacaggagggtttccatg
ggtctgaatggagacctgtacttcgccaatgttttggtccaagacgctcacagtgactac
agctgcaacgctcgcttcaacttcacatacaccatccagcagaagaaccccttcaacctc
aaagttcagaccacggagccatataatgacacatcttacaatgcctctgatcccttcggt
ggccgcaaagtagcagagacaccgccgtccttcctgtctcctgaggggagtgggagctcc
aaaatggtgctacgagatgagcaattgctgctggagtgtatcgctgctggccttccgact
ccctccatcaagtggtttaagagagggggagacctgccagcacagaaggtgaagtttgaa
aacttcaataagactctgaaaattctcagcgtgtcagaggaggatgctggggagtatgtc
tgcatggcagacaaccgactgggcagcatacgccattccatcgacgtccaagtcaaagct
gctccttactggttagacaaacccacaaacctggtgctggccccagaggaaaatggccgt
ctggtgtgtcgagccaacggcaaccctaaacccaacatccagtggcttatgaacggcgag
ccaataaacaaaatcacagaaactccagcaagcgcaaacagagaagttcttggtgacacc
attatgttccgcggcgtgcagatcggaagcagtgcggtctaccagtgcaacgcctccaac
cagcacggctatctgctggccaacgccttcgtcagtgttctcgacatggctccacggatg
ctgggacccaaaaatcagttaatcaaagtcatcatgaacaaccgaaccttcctcaactgc
cctttctttggctctcctttacctgagcttcgctggtttaagaatggccagggcagtggg
ctggatggcggtcagtaccgggcccacatcaacggcaccctggagataaaacgcgctcga
aaggaggatgagggcatctacacctgtgtggctaacaacatgttgggcaaagctgagaac
caggttcagctggaggtcaaagagcctactcgtataattcaagctcccacgcaccagtca
gttttgaggggctctaaagctagcttccactgtaaggtggtgtcggaccccagcctgccc
accaaggtgacctggaccaaggacggagagcgcctggatcttggatggaggctgaagaag
gatgaagagtctctcaccatcccgtctgtcactgagaacgatgagggaatttacacctgc
actgttaaatctgagatagaccaggactcagcctcagcccgcctcactgtcttagaggac
gccttcctcaacccctcagtctttagtgccttgcctccagaccgtccagacccaccaata
gatctggatctgtcagacccatcagcccgtagtgttcgtctcacctggattcctgggaac
gagcgcaggagcccagtcacagagttcttggtccagttcgaggagaaccactgggaaccg
ggcagatggcaggacctgtcctctttccccggagacctcaactcggtcatcctgcagctt
gcccccaatgtcaattatcagttcagggtcattgccatcaactcagtgggtcggagtcaa
cctagtcagccctcacctcggtacaaaaccaccgcggcacccccagatgccattcccaga
gatttacgtggttggggatccgataaggacaacatggagatcacctgggagccgctgcgc
gatctggagaaaaatggcccaaacctgcagtacaacgtgtggtggagacggaaagactcc
ggggacaactggaccaacgtgaccacgtccgagtccaaacacgtcgttcgttacactgaa
acatatgtgccttacgagatgaaaatccaggccaggaacgagttgggatcaggacccgag
tctaacatcgtcattggatattctggagaggacaaacccgctgattcacccactgagctg
cgggtgtcgaaggtcagcagcaccagagcaaacatccactggaaacctgtagatctgagt
tctgtccagggagagttcaaagagtacagattgtactactggcgcgaggccagtctggtt
ccaggggtggtggtgagcaaggagaagatgaccactgggttctacacgactgttccagaa
ccgtctgggattctcaaagacttggtgccctactctaaatataagatgttcatggttgtg
gccaacagtcgctatgagagtctccccagcaacaatgtggaattcaccacagcggaggac
gttccggatgctcccaggttcttcaggattaaccgcagaagtctggacacgctctacttg
gaatggggcaaaccattagaacccaacggcattctagttggataccaacttgcataccag
agagtgaacgggtccagactaggtccccagcagattgagacgttccgtcccaacgagaca
gacttcgtcctgcgcctgccggaccggaacgctcgctacaagttcaacctgtcagcgctc
accaaggtgggaaagggggaggtctatgccgaggagtcgccacactttaccaatgaagaa
aactttactgatgctacagatgtagttgaacttacggacgccaccctgtctcctgttttc
tctcctactcccactcctcttcctcctactaccatccctcccacaacaattagtatcaca
actcctacccctcctcctacccctcctcctacccctcctccaacaacccctcctactact
accactactactaccactgaggcaactacaccctccacagttcctgtgctggtcaccacc
aaacgagttgatcaaaatgtcttggtaacccctcggcgggagatctggaatctgacggtg
gtccccgacagttactacgctaacgtcaactggagtcacaacttcccagctgacagcaag
tttgttctagaggtcactctggacagcaacaagacagtgacagtcgaagaggtgaaacag
ccgcccgttaatctgaaggctctgatcgctggtgagaagtaccatctgagggtttactcc
caagagctcaacagcgtcagcagcaaatctgtcacctttaaaactaaagcagctcacata
gaccaggtagacatagccactcagggctggttcattggcttgatgtgtgccattgccctg
attatactgatcctcctcattgtctgcttcatcaagaggagtcgcggaggcaaataccca
agtcccggattcttgactggtttcacaaaatacctcgttcgtgacaaaaaagatcttccc
ctggatccagtggaccagaaagatcaggatggatcctttgattaccaaaatggttcatct
gtccgcgacaggaacgaaaatgagaacagcagcgacgaggacaacaagcctctgcagggc
agccagacttcgctggacggcaacgtgaaggagagcgacgacagcctcgtggactacggc
gaaggcggcgacggccagttcaacgaggacggctccttcatcggccagtacacagtgaag
aaggacaaggacgagacggaggggaacgagagctccgaggccacctctcctgtcaacgcc
atttactcgctggcgtag
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