Poeciliopsis prolifica (blackstripe livebearer): 129358657
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Entry
129358657 CDS
T09758
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169 isoform X1
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129358657 (rnf169)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129358657 (rnf169)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129358657 (rnf169)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129358657 (rnf169)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
129358657 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZR_2
Motif
Other DBs
NCBI-GeneID:
129358657
NCBI-ProteinID:
XP_054883691
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MATAGFAEQRSSQAGTAADSSRSRPGPPAAARCRSGSGLPEKCSACSESRSGSGTACSRC
HARRVPSREERIRRRSDPERGGSRAGKRDGESRRGVFVCPTLTKSADAPAAPAAKLKVSL
GAFRKSLHPEYGQESVPPLPVQLLASDDREEIRRWTCLMGKDEFGSARRAVEPGVLSDSE
NEEPISRRIRNISAFIRKTKNSSAVSSGSRRSRSCTDPMEDRGGKMKAIVPPAAVMEQVG
ISHSSAAGILLSSENSRSISAPITAPDRRLTWRAVLTSSAPLGLPPPPARAERSISPESN
DSISEELNHFKPIVCSPCTPPKRLPDGRLLEPTVIKATPRNLSRSLQKATSYEASPAVLQ
KWRQIELDRQGLKVSSRATLTSPAPEAEGGGASKAPQHRGALALANRRRLLFEPPDLDGF
QKQSVKIRVPALRYGAALRGCPDLESAGAAPEHGGGPAPFGRKHSFSPCNNSGFRPGKLV
PKDSLSPRKEWETLCNQSTSRRGKKRNQKTKHLDPALDPVLDPALDPAPKRSRAGGQQEA
PCPVQQERQDRALALRLQRQFDLEVHRTSPDRYFLRSWRSTQYRRRRGLRTARPISKKL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcagggttcgccgaacagcgatccagtcaggccggtaccgccgcagactcc
tcccggtcacggcccggcccgccagcagccgcccggtgccgctccgggtccggcctgccg
gagaagtgctcggcttgctcagagagccggtccgggtccgggacggcctgttcccggtgc
catgcccggagagtcccgagcagagaggagcgaatccggagaagaagtgaccccgagaga
ggcggcagcagagcgggaaagagggacggcgagagccgcagaggcgtcttcgtctgtccg
accctgacgaagtctgcagacgctcctgcggctccggctgcgaagctcaaggtgagtctg
ggagccttcaggaagtctctgcatcccgaatatggtcaggaatctgtcccgcctcttcct
gtccagctgctggcgtccgacgaccgggaggagatccggaggtggacctgcctgatgggg
aaggatgaattcgggtcggcgagacgcgccgtggagccgggggttctgtccgactctgag
aacgaggagcccatcagcaggaggatccggaacatctccgccttcatcaggaaaaccaag
aactcctcagccgtcagcagcggttcccggaggagtcggagctgcaccgaccccatggag
gaccggggagggaagatgaaggcgatcgtcccgccagcggccgtcatggagcaggtgggc
atcagccacagctcggcggccggcatcctgctgtcgtcagagaacagccgctccatctcg
gcgcccatcacggcgccggatcgccggctcacctggagggcggtgctgacgtcatcggcc
cctctgggcctgccgccgccgccggcccgcgccgagcgctccatcagccccgagagcaac
gacagcatctcagaggagctcaaccacttcaagcccatcgtctgctcgccgtgcacgccg
cccaagcggctgcccgacggccgcctgctggagccgacggtcatcaaggcgacgccgcgc
aacctgagccgcagcctgcagaaggccaccagctacgaggcgagcccggccgtcctgcag
aagtggcggcagatcgagctggaccggcaggggctgaaggtcagctccagggccacgctc
acaagcccggcccccgaggccgaagggggcggagcctccaaggcgccgcagcaccgcggc
gccttggcgctggccaacaggaggcggctgctgttcgagccgccggacctggacggcttc
cagaaacagtcggtgaagatccgcgtcccggccctccgctacggcgccgccctcagaggc
tgtccggacttggagtcagccggcgccgcaccggaacacggcggcggcccggcgccgttc
ggacggaaacactcgttctctccatgcaacaactccgggttccgacccggaaaacttgtg
ccaaaggactcattgagtcccaggaaggagtgggagaccctctgcaaccagtctacctca
aggaggggcaagaagaggaaccagaagaccaaacacctggacccggctctggacccggtt
ctggacccggctctggacccggcgccaaagaggagccgggccggcggccagcaggaggcg
ccgtgtcccgtccagcaggagcggcaggaccgagcgctcgccctcagactgcagagacag
ttcgacctggaggtccacaggaccagccccgaccgctacttcctgcgctcctggaggtcc
acccagtaccgccggaggcggggcttgaggacggcccggccaatcagcaagaagctgtga
DBGET
integrated database retrieval system
