Poeciliopsis prolifica (blackstripe livebearer): 129358708
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Entry
129358708 CDS
T09758
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03022
Basal transcription factors
pprl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129358708 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
129358708 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129358708 (ercc2)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129358708 (ercc2)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129358708 (ercc2)
Enzymes [BR:
pprl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129358708 (ercc2)
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129358708 (ercc2)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129358708 (ercc2)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129358708 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
129358708
NCBI-ProteinID:
XP_054883772
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
RAFPLDVTKLIYCSRTVPEIEKVVEELRKLMEFYAKETGEVNNFLALSLSSRKNLCIHPE
VSSLRFGKEVDGKCHSLTASYIRAQRHSNPNLPVCRFYEEFDAVGRQVPLPAGIYNLDDL
KDFGRRKGWCPYYLARYAILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMSVNITRRTLDRCQNNVDTLQNTIHKIKETDAARLRDEYRRLVEGLKEANVARE
TDIYLANPVLPDEVLHEAVPGSIRTAEHFVGFLRRFLEYLKARLRVQHVVQESAPQFLKD
IFDKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSQGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIYPRILDFRPVTMAS
FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAVVPDGIVAFFT
SYVYMENIVASWYEQGILENIQKNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRYARSDKRGKLPRWIQEHINDGSLNLTVDEAVQLSKHF
LRQMAQPFRQEDQLGLSLLTLEQLQSEEMLQKISQMAHQT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaacatcgagggtctgctggtctattttccttatgactacatctatccggag
cagtactcttacatgctggagcttaagaggactttggatgcaaaaggtcatggagtcctg
gagatgccgtcaggaacagggaagaccatctctctgctgtcgctcatcgtcgcctaccag
agggcgtttccgctggatgtgaccaagttgatttactgctccagaacagttcctgaaatt
gagaaagttgtggaggaactcaggaagctgatggagttttatgccaaagaaactggagaa
gtgaacaacttcctggctctgtctttgtcctccaggaagaacctctgcatccacccagag
gtcagctctctgcgttttgggaaggaggtggatgggaagtgccacagtctgacggcgtcc
tacatccgcgctcaacgccacagcaatcccaacctgcctgtctgtcgtttctatgaggaa
tttgacgcggttggacggcaggttcctcttcctgccggcatctacaacctggacgacttg
aaggactttggcaggaggaaaggctggtgtccgtactacctggctcgctacgcgattctt
catgccaacatcgttgtgtacagctaccactacctgctggacccaaagatagccgacctg
gtgtccaaggagctggccaagaagtcagtggtggtgttcgatgaggcccataacatcgac
aacgtgtgcatcgactccatgagtgtgaacataactcggcgaacgctggaccgctgccag
aacaacgtagacacgctacaaaacacaatacacaagataaaggagacggatgctgccagg
ctgagggacgagtaccgacgattggtggaggggctgaaggaagccaacgtcgccagggaa
acggacatctacctggcaaacccagtgctacctgacgaggtcctgcacgaggccgttccc
ggttcgatccgtacggccgaacactttgtcggcttcctgcggcgttttctggagtacctg
aaggcccgcctgcgggtgcagcacgtcgtgcaggagagcgccccgcagttcttaaaagac
atcttcgacaaagtctgcattgacagaaaacctctcaggttctgtgcggagaggctgcag
tcgctgctgcgaactctggagatcgcagacatcgcagacttttcggccgttacgctcatc
tctaactttgcgactctggtcagcacctacagccaaggttttaccatcatcatcgaacct
tttgaggacagaactccaaccatcgccaaccctgtgctgcattttagctgcatggacccg
tctatcgccatcaaacctgtttttcagaggttccagtccgtcgtcatcacctcagggact
ctctctccgttggacatctaccctcgcatcctcgactttcgacccgtcaccatggcgtcc
ttcactatgacgctcgcacgaacctgcctctgtcctctgattgtcggccgaggaaacgac
caggtggctctgagctcaaagttcgagacgagagaggatttcgccgtgatccgtaattat
ggcaacctcctcctggagatgtcggcggtggttccagacgggatcgtcgcgttcttcacc
agctacgtctacatggagaacatcgtggcgtcttggtacgaacaggggatcctggagaac
atccagaaaaacaagctgatcttcatcgagacgcaggacgcggcggaaaccagcatggct
ctggaaaagtaccaggaggcgtgtgagaacggccgaggagccatcctcctctctgtggcc
cgggggaaggtctctgaaggaatagacttcgttcaccattttggcagagcggtcatcatg
tttggagtcccgtatgtttacactcagagccgcatcctgaaggctcggctggagtatctg
cgggatcagtttcagatcagagagaacgacttcctgacgtttgacgccatgcgacacgcc
gctcagtgcgtcggcagagccatcagaggcaagacggactacggcctcatggtctttgct
gacaagagatacgctcgatcagacaaacgtgggaaacttcctcgttggattcaggagcac
atcaacgacggcagcctgaacctcacggtggacgaagccgtccagctgtccaagcacttc
ctgcgtcagatggctcagccgttcagacaggaggaccagctgggtctgtctctgctgact
ctggagcagctgcagtcggaggaaatgctgcagaaaatctctcagatggctcatcagacc
taa
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integrated database retrieval system
