Poeciliopsis prolifica (blackstripe livebearer): 129358902
Help
Entry
129358902 CDS
T09758
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04142
Lysosome
pprl04144
Endocytosis
pprl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129358902
04142 Lysosome
129358902
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129358902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129358902
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprl04147
]
129358902
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
129358902
Exosome [BR:
pprl04147
]
Exosomal proteins
Proteins found in most exosomes
129358902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
129358902
NCBI-ProteinID:
XP_054884117
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPSGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGMVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPADAWKEGQFKDIVTKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KMKQLPLVKTYLRSVQNHNNKAVNEALNNLFINEEDYAALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLNE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
EASESLRKQEEQATESQPIVYGTPQLMLTAGPNMAVPPQQAYGYGYTGAPAYGQPPQPSF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattctgcctatccgcttccaggagcacctgcagctccagaacttggggatc
aacccagccaacattggcttcagcactctcaccatggagtctgacaagttcatctgtgtg
agggagaaagtgggtgagcaggcccaggttgtcattattgacatggctgatcctaacaac
cctatccgccggcccatctctgctgacagcgccatcatgaaccctgccagcaaagttatt
gcacttaaagctgcaaagaccctccagatctttaacattgagatgaaaagcaagatgaag
gctcacaccatgacagacgacgtgactttctggaagtggatctctctcaacaccgttgcc
ctggtcacagacaatgccgtgtaccactggagtatggaaggcgattctcaaccaatcaaa
gtgtttgaccgtcactcgagcctggcaggctgccagatcatcaactaccgtactgatgcc
aaacaaaagtggttgctcctcattggtatctcagctcagcaaaaccgtgttgttggtgcc
atgcagttgtactctgtggacaggaaggtctcccagcctattgaaggccatgctgctggc
tttgcacaatttaagatggagggcaacaccgaagaatcaactctgttctgctttgctgtg
cggggacaagcaggaggaaaacttcatattattgaagttggaaccccgccaagtggaaac
caaccattccccaaaaaagccgtggatgttttctttcctccggaagcccagaatgacttc
cctgttgctatgcagatcagctccaagcaagatgtcgtttttctcatcacaaaatacggc
tacatccacctttatgatctggagactggaacttgcatctacatgaaccggatcagtggg
gagaccatttttgtcactgccccacatgaacccactgctgggatcattggagttaacagg
aaaggacaggtgctttcggtgtgtgtggaggaggaaaatataattccctacatcaccaac
gtgctccagaacccagacctggctctacgcatggctgtacgcaacaaccttgctggagct
gaggaactattcgctcgcaagtttaacaccctgtttgctgcaggaaattactccgaagca
gccaaagtggcggccaatgctcctaagggcatcctgcggactccagataccattcggagg
ttccaaagtgttccagcacaaccaggccagacttctcctttgctccagtactttggcatc
ctgctggaccaaggccagctcaataagtttgagtccctggagctctgcaggcctgttctt
cagcagggccgcaagcagctactggagaaatggctgaaggaggataagctggaatgttct
gaggagcttggagacctggtgaagtctgttgatcccactctggccctcagtgtgtatctc
agagcaaacgtccccaataaagtcattcagtgctttgcagaaactggacagtttcagaag
attgttctttatgccaagaaggtgggctacacaccagactggatcttcttgttgaggaat
gttatgcggatcagtccagagcaaggtctccagttctcccagatgctggttcaggatgag
gaaccgcttgctgatattacacaaattgttgacgtatttatggagtacaacctgatccag
cagtgcacctcattcttactagatgctctaaaaaacaacagacccatggaaggaccgctg
cagacacgtttactggaaatgaacttggttcatgctccacaggtggcagatgccatcctt
ggcaatcagatgttcacccactatgaccgtgcccatgtggcacagctgtgtgagaaggct
ggcctcctgcagagggcgctggagcattacacggacctgtatgacataaagcgagccgtg
gtgcacacacaccttctcaacccggagtggttggtgaatttcttcggctccctctcagtg
gaggactccttggagtgtctgagagccatgctgtcagccaacatccgccagaacctgcag
atctgtgtgcaggtggcgtcaaagtaccatgaacagctcactactcagtccctcactgag
ctgtttgagtcattcaagagctttgaaggattattctacttcttgggttctatagtgaac
tttagtcaagatccagaggtgcatttcaaatacattcaagccgcctgcaaaaccggccag
attaaagaggtggagagaatctgtcgagagagtaactgctacgacccggagcgggtgaag
aacttccttaaggaggctaaacttactgaccagcttcctttaatcattgtatgtgaccgc
tttgattttgtccatgacctggtcctctatctgtatcgcaacagccttcagaaatacatc
gagatctacgttcagaaggtgaaccccagtcgtctgccggtggtcatcggaggtttattg
gacgtggactgtgccgaggatgtgattaagaacctgatcatggtggttaggggtcagttt
tccacagatgaacttgttgctgaagtagagaaaagaaatcgtctgaagttgctcctaccc
tggttggaggctcgtatccatgaaggctgcgaggaacctgctacccacaatgctttggcc
aagatctacatcgacagcaacaacaaccctgagcggtttctaagggagaaccctttctac
gacagccgtgttgtgggcaaatactgtgagaaaagagacccccacctggcctgtgtggct
tacgagagaggacagtgtgaccaggaactcattcatgtgtgcaacgaaaactcgctgttc
aagagtctgtcccgctaccttgtacgacgcaagaaccctgagctgtgggccagtgtcctc
ctggagaccaacaactacagaagaccccttattgaccaggtggtccagacagcattatca
gagactcaggatccagaggaagtatctgtcacagtgaaggctttcatgacggccgacctg
cccaatgagctcattgagctgctggaaaagattgtgctggacaattctgtcttcagtgag
cacagaaacctgcagaacctgctcattctgacggccattaaagctgaccgaactcgtgtt
atggagtacattaatcgccttgacaactacgatgccccagacatagcaaatattgccatc
agtaacgagctgtttgaggaggcctttgcaattttcaggaagtttgacgtcaacacctct
gctgttcaggttcttattgagcacattggaaacttagacagggcctatgaatttgctgag
cgttgcaatgagcctccggtgtggagtcagctggccaaggcccagctgcaaaagggaatg
gtcaaggaagccatcgactcctacatcaaggctgacgacccgtctgcttacatggaggtg
ggacaggctgcagcccaaagtggaaactgggaggatctggtaaagttcttgcagatggct
cgtaagaaggctcgggagtcgtatgttgagacggagctgatcttcgctttggccaaaacc
aatcgtctggcagagctggaagagttcatcaacggtcccaacaacgctcacattcagcaa
gtgggcgatcgttgttatgacgacaagatgtacgaagcggccaagctgctttacaataac
gtctccaactttggccgtttggcctccacgttggtgcatttgggagaataccaggcagct
gtagatggagcacgcaaagccaacagcacccgcacctggaaggaggtgtgtttcgcctgt
gtagatgggaaggagttccgtcttgcccagatgtgcggtcttcacatcgtcgtccatgcc
gacgagctggaggaactaatcaactactaccaggaccgcggttactttgaggagctgatc
accatgcttgaagccgctctgggtctggaacgtgcccacatgggaatgttcactgagctg
gccatcctctattccaagtttaagccacagaaaatgagggaacacctggagctcttctgg
tcccgcgtcaacattcctaaagttctcagggcagctgagcaggcccacctctgggctgag
ctggtgttcctctatgacaagtatgaggagtatgacaacgccatcatcaccatgatgaac
catccagctgacgcctggaaggagggtcagttcaaagacattgtcaccaaggtggcgaat
gtagagctgtactacaaggccatccagttttatctggagttcaagccgttgttactgaac
gacctgctcatcgtgctctctccccggttggaccacacccgggccgtgaacttcttcagc
aagatgaagcagctgcctctcgttaaaacgtacctgcggtcagtccagaatcacaacaac
aaggcagtaaatgaggcactcaacaacctcttcatcaatgaggaagactacgcggctttg
cgaacatccatcgacgcgtatgataacttcgacaacatctcactggctcagagcctggaa
aagcacgaactgatcgaattcaggaggattgcagcttatcttttcaagggcaacaaccgc
tggaagcagagcgtcgagctctgcaagaaggacaaactctacaaggacgccatgcagtat
gcatcagagtccaaagacacagagctggccgaggagcttctggcctggttcctgaatgaa
gacaaaaaggagtgtttcgccgcctgcctgttcacctgctacgacctgctgcggccagac
gtggtgctggaaactgcctggcgacacaacatcatggacttctccatgccatacttcatc
caggtcatgagggagtatctctctaaggttgatgcgataaaggaaaaggtggacaaactc
gaagcctctgagtctctgaggaaacaggaggagcaggccacggaatctcaacccattgtt
tacggcacaccgcagctgatgctaacagcagggcccaacatggccgtgcctcctcagcag
gcgtatggctatggctacacgggggcaccagcctacggccagccgccacagcccagcttt
ggttacggcatgtga
DBGET
integrated database retrieval system
