Poeciliopsis prolifica (blackstripe livebearer): 129358923
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Entry
129358923 CDS
T09758
Symbol
frem2b
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129358923 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pprl04091
]
129358923 (frem2b)
Lectins [BR:
pprl04091
]
C-Type lectins
Lecticans
129358923 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
DUF6522
TM_ErbB1
Protocadherin
LAX
TMEM154
Motif
Other DBs
NCBI-GeneID:
129358923
NCBI-ProteinID:
XP_054884157
LinkDB
All DBs
Position
Unknown
AA seq
3114 aa
AA seq
DB search
MAWIIPSHLHGTGAALLLLALVLTGDAAATGFDSYGLSYALRPELSEDTILVANNGIRVP
FGRSVFIDPINDLVVQVQPGDRCSITVLDNDPLSQRPGHLSPKKFPCEFGPNDVRYSHFG
SRSPPRDRVRLQLRYDTQTDTMIIPFMMEVEVIFTQLEVLTKNMPLTVNSLLGTSNPIDR
GILEFTFDRSAQQCKIASLTSGNVIPRYGKLVDEESLGTMVDCDEFIRMNIRYQHTFTSK
SPNRDYIPMLVELYDKEGNVLKQEFFQILVRIKDGEDNTPPKPSFVAMMMMEVDQFVMTA
ITVDMLAAEDVESNPDELIFNITSPLSFEEGYIVSTDDRNLPITSFYQGDLKELKIAYKP
PAVDSDTERIFQVELEVVDTEGAVSDTFEFMIVVKPMNTLAPVVTRNTGQLLYEGQSRPL
SSSHNLEISDEDNLDKVRISVIDGLRHGELTVLGSRRKFFTPADLDAGVVIYQHDGSDTY
SDNIIFRMTDGTNEVEFLFPITVVPTDDEAPIINANTGLILFKNQVMQIFSSMLSAADID
SEDSTIKFVLELPSPTVGQVLLRQSEAPKDPSTWKFNSEDEMYEKVVTEWLQQDIIDGKL
FYKHTGPHSTSTVMDQFVFRVQDDNDPPNKSGKSTFIIKIIPVDDLPPELYPSTTLQMTV
QEYQLTHFRKKFLRYTDLDSEDRDLKYTIIQPPTDTDENNPVVLGALVLTETPNTEVTTF
TQAQINHHKIAYKPPDVELGITTHVLQFRYTVEDVSRNSVEGVFTILLKPVDNKPPEITN
TGFTVLERGRHILTRGELDTTDTDTDSSKITFTITQPPLHGQIQFIFTHMTKGDTFNLEN
IGNGMISYINNGDESTVDLIKIDVSDGVHVVPISIKITVKPIDDETPIINLPAGTIGSYI
DVLENEATEITSNVIQGRDEDTDDLRLTFIVEDKPSFGEILVKGVPSSTFTQADIINGFV
VYAHTSGEIGLNTKEDFFNLTLTDMSDEWTIGGNKITGVRVHVTILPLDSQAPEVFVGPQ
FTVTEGEKNVIQILHISADDVDTPNDDLLCTIIVQPTSGYVENISPAPGSEKSRSGTAIS
AFTIKDIRQNHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPISIIPANDEKPEIY
MREFVVMEGMNIVIDTPILNGADADLPSDRLTFFIAKPPRHGFILNQLTTGTLPVSNFTL
EQIRDGSSIVYEHDDTETTEDSFEIVLTDGKFSVEKTVIVMVIPVDDETPRMAINDGLEI
EIGDVKVINNNVLKATDLDSEDSTLVYIIRYGPGQGYLQRTLPTGELQNISVGMNFTQNE
VDQGLILYFHNGQEGIRDLIKFDVTDGINPLIDRYFYVTIGGIDIVFPDVINKGVSLKEG
GRVTLTTDLLSTSDLNSPDEHLVFTITRAPVRGHLECTDTPGMPISSFTQLQLAGSKIYY
IHTADDEVKMDSFEFEVTDGYNPVFRTFRISITDVDNKKPVVTVHGLVVTEGENKLITPF
EITVEDRDTVDRLLRFTVTQIPVHGRLLFNNSQPVTSFTKQDLNENMISYKHDGTESAED
SFSFTVTDGTHTDFYVFPDTVFETRKPQVMKITVLAVDNGVPHIIVNKGAQTLRVMERDL
LGFVITSKSLKAEDRDSIQDSVTFRITVAPEHGYLINLGRGNATVSKFTQAEIDDMSICY
ILKHGDNATNDIFHFSIEDNGGNKLRNQQFRLNWAWISLEKEHYVVDEEVKFLEVVLKRR
GYLGETSFVSIGTKDNTAVKDKDFRGKAQKQVQFNPGQTTATWKVRILSDSEYEVSETFQ
IVLSDPVMAALEFPEVARVEILDPDDESTVFIPSAVYYIEEDIGELLIPVLRSGDVNQEL
MVICYTQQVSATGTVPTTVLSYSDYISRPEDHHSILRFDKGEIEKSCRIVIIDDSLYEDE
ESFNVTLSMPMGGRLSAQFPTARVIIIPDMDDAPVFYFGSTEYHVDESDAFVEVQVWRTG
SDLSKGGTVTVRSRRTDPVSAEAGVDYVGISRNLDFAPGVTMQTFRVTILDDLGQPVLEG
PEKFELVLRMPMNGILGEPSKTSIIINDSISDLPKVQFRHAVHVGSESSGQISAMVYRSG
DISYKSTVRCYSRQGTAQVMMDFNERPNTDASIITFLPGEIEKPCLLVLVDDTEHEEEEE
LRLVLGSPKSESPFGASIGKQNETLIKIKDDADRSVISFEETKFSVNEPKKKGQVSVVKI
SVLRVGDTSKVSVVRVHTKDGSATSGEDYHPISEEIVFRQGDTEHHVEVEVLYDGVREMR
EAFTVHLKPDENMVAETKMSKAIIYIEESNSMADVTFPSIPIVISLFNYDDIEQNRPSLP
VAGYPVICVTACNPKYPEYHKTGSICVSESINNTLTRYRWLVSAPTGPDGVTSPMREVDF
DTFFTSSKLITLDSVYFQAGSRVQCAARAVNSNGDEGLEQTSSIVSISTDEGMCQPRVVG
TVGAEPFSARLRYSGAEETDHPNLIKLTVTMPHIDGMLPIVSTRPLSNFELTLSPDGTRV
GHHRCSNLLDYTEVKTHYGFLTEATKNPEIIGQTAPYQYSTSLRGSNTLRFYRNLNLEAC
LWEFTSYYDMSELLSDCGGTIGTDGQVLNLIQSFVTLRVPLHVSYVFHSPVGAGGWQHFD
LQTELRLTFVYDTAILWRDGIGTPPEAELQGALYPTSMRINGLGQLVVNFRTEARFRGLF
VLAHLASPLTSMVMCADHPGLTFNLSLVRSEPTYSQPIQQWTFISDFAVRDYSGLYTVKL
IPCTSPPSLEYTLPPVCSPREPLTFDLDIRFQQVSDPVAAEFSLNTQMILLSKRTLWLSD
GSMGFGQESDTAFSQGDIIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYVPKYNPGNF
EFGCLADAPSLLYRFKIIDKAQPETQAHSFGNVAFNAFLAVDDPGALVLVRQSGADGFRM
DSAALFQVAAGREWYIHTIYTVRSRDNANRGIGKRSLEYHAISQHSDRLLKGHHRTRRSS
SDEPDIVDGFGVENNRGTNILHISLDRSSQQKMSPENEIFTKGIIPQELNQRDSDDRLVL
IIGVFVGLLLTVLLIIVVVLLVRSKQEKKEVPRSSTSTEPMITQSLSNSDSSEV
NT seq
9345 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattattccttcgcatctgcacgggactggcgccgctttgcttctgctggca
ctggttctgacaggtgatgccgcggcgactggttttgacagctatggattatcatacgcc
ttgaggccggagctctcggaagatacgatactggttgccaataatgggatccgcgtgccg
tttgggagatcagttttcattgatcccattaacgatttggtggtccaagttcagcccggc
gacagatgcagcatcacagtgttggacaacgacccgctgtctcaaagaccgggacacctg
tctccgaaaaagtttccgtgtgaatttggccctaacgacgtgaggtattcacactttggc
tcccggagtcccccgagggacagagtgaggttgcagctcaggtacgacacccaaacggat
acaatgattatacctttcatgatggaggtggaggtgatcttcacacagctggaggtgctg
acgaaaaacatgcccctcactgttaactcactgctgggcaccagtaatcctatcgataga
ggcattttggagttcacctttgacagaagcgcacagcaatgcaaaatagcttcgctcacc
agcggcaacgtgattccccgctatgggaaacttgtggatgaggagagcctcggaacaatg
gtagattgtgatgaattcattaggatgaacatccgctatcagcatacttttacttcaaag
tccccaaacagagattacatccccatgctggtggaattatatgataaagaaggaaatgtg
cttaagcaggaattcttccagattctggtgcgaataaaagatggagaggacaacacgccc
cctaagcccagctttgttgccatgatgatgatggaagtcgaccagtttgtaatgacagca
ataaccgtagacatgctggctgctgaggatgtggagtctaatcctgacgaattaattttc
aacatcacttcccctctctcctttgaagagggttacatagtcagcacagatgacaggaat
ttacccataacctcattttaccagggagacctcaaagaattgaaaattgcttataagcct
cctgctgtggattcagacactgagaggattttccaggttgagcttgaagttgtggacaca
gaaggggctgtgtcagacacatttgaattcatgattgttgtcaagccgatgaacacgctg
gcccctgtggttacaaggaacactggtcagctactgtatgaaggccagtccaggccgttg
tctagttcacacaatctagaaatcagtgatgaggacaatttagacaaagtaagaattagt
gtaattgatggcttgaggcatggagagttaactgttctgggctccaggagaaaatttttc
accccagctgaccttgacgctggagtagtcatttatcagcatgacggtagtgatacatac
agcgataacattatcttcaggatgaccgatggcacaaatgaagtggagtttttgtttccc
atcactgttgtgcctacagacgatgaggcacctattatcaatgccaacactggtttgatt
ttgttcaaaaatcaagttatgcagattttctcatcaatgctcagtgctgcagatattgac
tcagaagattctacaataaagtttgtattagagcttccctctccaacagtggggcaggtg
ttgctgcgtcagtctgaggccccaaaggacccatctacctggaagtttaattcagaggat
gaaatgtatgagaaagtagtgactgagtggctgcagcaggacattatcgatggaaaactg
ttttacaagcacacagggcctcacagcacgagcacagtcatggatcaatttgtgtttaga
gtacaagatgacaatgatcccccaaataagtcaggtaagagcacattcataatcaaaata
attcctgttgatgacctcccgcctgaactttacccgagtacaaccttacaaatgactgtt
caggagtaccaactgacgcacttccggaaaaaattcctccgctacactgaccttgattca
gaggatcgagatttaaaatacaccattatccaaccacctacagacacagacgagaacaac
cctgttgtactaggagccctggtattgactgaaaccccaaacactgaagtcacaacgttc
acacaggcacaaattaatcatcacaaaatagcctacaaaccacctgatgttgagcttgga
attaccactcatgttctacagttcagatacactgtggaagatgtctctagaaatagtgtg
gagggagttttcacaatactcttaaagcctgtggacaacaagccacctgaaataacaaac
accgggtttactgtgctggaacgtggcagacatatcctcaccagaggcgagttggacacc
acagacacagatacagacagcagcaagataacattcactattacacaacctcctcttcat
ggtcagatccagttcatattcactcacatgacaaaaggggataccttcaaccttgagaat
attggaaatggaatgatctcatacatcaacaatggagatgaatcaacagtagacttgata
aaaatagacgtcagtgatggggtgcatgttgttccaatttctataaaaattacagtgaag
ccaattgatgatgagactccaataatcaatctgccagcggggacaataggctcctacata
gatgttctagaaaatgaagcaacagaaatcacaagcaatgtaattcagggaagagatgag
gacacagacgacctccgtttgaccttcatcgttgaagacaaaccgtcatttggtgaaatc
ctagtgaaaggagttccatcgagcacgtttactcaagctgatatcattaacggctttgtg
gtctatgctcatacaagcggagagattggcttaaacacaaaggaggactttttcaatctc
actctgactgatatgtctgatgagtggactataggaggaaataaaattacgggtgtcaga
gttcatgtaactattcttcccctggacagtcaggctcctgaagtctttgttgggccacag
tttactgttactgagggagaaaaaaatgtaattcagattcttcatataagcgctgatgac
gtagacacccctaatgatgaccttctttgtacaattattgttcaaccaacttcagggtat
gtggaaaacatctctccagcaccaggctcagagaaatccaggtctgggacagccattagt
gctttcaccatcaaagacataagacagaatcacatttactatgttcaaagcattcacaaa
ggagttgagccagtggaggacaggtttaccttcagatgttctgatggcatcaatttctct
gaaaggcacttttttcccatctccataatccccgctaatgatgaaaagccagagatttac
atgagagaatttgtagttatggagggcatgaacatagttattgacactcccatactgaac
ggtgctgatgcagacctcccgtctgatcggctcacatttttcatcgccaaaccccccaga
catggatttattcttaatcagctcaccactggaactctccctgtgtcaaacttcacctta
gaacagatcagggatggctctagtattgtgtatgagcatgacgacacagagacaacagaa
gatagctttgaaattgtcctcacagatggaaaatttagtgtagagaaaacagtgatagtg
atggttattcctgtggatgacgaaaccccgaggatggctattaatgatggcctagaaatt
gagataggtgacgttaaagtaattaacaataatgttttaaaagccactgatctggactca
gaggatagtacgcttgtgtatattatcaggtatgggcctggccagggatatttgcaaaga
acattgccaactggtgaattgcaaaatatctcagttgggatgaattttacacaaaatgaa
gtagatcagggattgattttgtacttccacaatgggcaagagggaatccgagacctcatt
aagtttgatgtgacagatggaatcaaccctttaattgacagatacttctatgtaacaata
ggtgggatcgacatagttttccctgatgtaatcaataaaggagtgtcccttaaagaggga
ggccgagttaccttgacaactgatcttcttagtacaagtgacctgaacagtccagatgaa
cacttggttttcacaatcacccgtgctcctgtgagaggacacctggaatgcacagacaca
cctgggatgccaatctcatcctttactcagctccagctggctggtagcaaaatctactac
attcacacagctgatgacgaggtgaaaatggatagctttgagtttgaagtgactgatggc
tacaaccccgtgttccgcacttttcgcatctccatcactgacgtggacaacaagaagcct
gtggttacggtacatggcctggtggtgactgaaggagaaaataaactcatcacacctttt
gaaataacagttgaagacagagacactgttgaccgcctgttgagattcacagttacacaa
attcctgttcatggtcgcctgctcttcaacaacagtcaacctgtgacctctttcacaaag
caagacctaaatgagaacatgatcagctacaaacatgatggcacagagagcgcagaggac
agtttctccttcaccgtcactgatggaacccacacagacttttatgtcttccccgacacg
gtttttgagaccaggaaaccccaagtgatgaagattactgtccttgctgtggataatggg
gtgcctcacatcatagttaacaaaggtgcccagacattgagggtgatggagagagatctc
ttggggtttgtgatcacaagtaaatccctcaaagcagaggacagagacagcattcaggat
tctgtgacttttaggataactgttgccccagaacacggttacctgatcaaccttggcaga
ggaaatgcaactgtctccaaattcacacaagctgaaatcgatgacatgagcatatgctac
attctgaagcatggtgacaatgcaacaaatgacattttccatttctccattgaggataat
ggtggcaacaagctgagaaatcagcagttcaggctaaattgggcttggatttccttggaa
aaggaacactatgtggtggacgaggaggtcaagttcctagaggtggtgctgaaacgtcgt
ggttacctgggagagacttcgtttgttagcatcggcacaaaggataatactgcagtgaag
gacaaagacttccgtgggaaggctcagaaacaggtgcagttcaacccaggccagaccaca
gccacctggaaagtcagaatcctgtcagacagcgaatatgaggtgtcagaaaccttccaa
attgtcctgtccgacccggtgatggctgctctcgaattcccagaggttgctagagtggag
atcctggacccagatgacgaatcaacagtgttcataccctcagctgtatactacatagag
gaggacattggtgagctgctcatccctgtactcagaagtggggatgtgaatcaagagctt
atggttatttgctacactcagcaagtttccgccacaggcactgtccccaccactgtgctg
tcctactctgattacatctctaggcctgaggaccaccacagcatcctgcgctttgacaag
ggagagatagagaaatcctgtcggatagtgataattgatgattccttgtacgaagatgag
gaaagcttcaatgtcaccctcagcatgcccatgggaggacgcctcagcgcacagttcccc
acagccagagtcataatcattccagatatggatgatgctccggttttctactttggaagc
acggaataccacgtggacgagagtgacgcctttgtggaggtgcaagtgtggaggacaggg
tctgatctttccaaaggaggaactgtgacagtccgctccagaaggaccgatccggtctca
gctgaggctggtgtggattatgtggggatcagccggaatctggattttgctccgggcgtc
accatgcaaacattccgcgtgaccatcctggatgatcttggtcaaccggtcctggaaggt
ccagaaaagtttgagctggtgctgcgaatgccaatgaacggcatcctcggcgagccgagc
aaaacgtccatcatcatcaatgactccatttctgacttgcccaaagtgcagttccggcat
gctgtgcatgtggggagtgaaagctcaggacaaatctcagctatggtgtaccgcagtggc
gacatcagctacaagtcaacagtccgctgttacagcaggcaggggacagcccaggtgatg
atggactttaatgaaaggccaaacacagatgcatccatcattaccttcctaccaggtgag
atcgaaaagccttgtttacttgtgctggttgatgacacggaacatgaggaggaagaagag
cttcgtctcgtcttggggagtccaaagagcgaatctccatttggagcatccattggaaag
caaaatgaaacgctcattaaaattaaagatgatgcagacagatctgttattagttttgaa
gaaaccaaattcagtgtgaacgaaccaaagaaaaaaggtcaagtctcggttgtaaagatc
tcagtgttgcgtgtcggagacacctctaaggtctctgttgttcgagtgcacaccaaagat
ggctctgctacctcaggggaggactaccatccaatatctgaggaaatcgtgttcagacag
ggagacacagagcaccatgtggaggtggaggttttatatgatggtgtcagagaaatgagg
gaggccttcacagtccatcttaagcctgacgagaacatggtggcagaaacaaagatgagc
aaagccatcatctatattgaagagagcaacagcatggcagatgtgacgtttccctccatt
cccatcgtgatttctctgtttaattatgatgacatcgaacaaaacagaccctctctgcct
gtggctggataccctgtcatttgtgtcactgcctgtaaccccaagtatccagaatatcac
aaaacagggtctatctgtgtgagcgagagcatcaacaacacgttaactcgctatcgctgg
cttgttagcgcccccaccggcccagatggtgtcactagcccaatgagggaggtagacttt
gacactttcttcacttcctccaaactcataactctggactcagtctatttccaggctggc
tccagggtccaatgtgctgccagggctgtgaactctaacggggatgaaggactagaacaa
actagttccatagtgtcaatcagcacagatgagggaatgtgtcagcctcgtgttgtaggc
acggttggggctgagccattttctgccaggctgcgatacagcggcgcagaggaaacagac
catccaaacctcatcaaattaactgtcaccatgcctcacattgatggaatgttgcctatt
gtatccacccgacccctttctaattttgagttgacgctgagccccgatgggacccgtgtc
ggccatcatcgctgctccaatttgttggactacactgaggtcaagacccactacggcttt
ttaactgaagccaccaagaatccagagattattggacagacagcgccttaccaatacagc
acttctctgaggggatccaacactctacggttctacagaaacctcaacttggaggcttgt
ttgtgggaattcaccagctactatgacatgtcagagcttctcagtgactgtggaggaacc
atcgggactgatggacaggtgctgaatctcatccaatcctttgtgaccctccgagtccca
ctgcatgtgtcctacgtcttccattctcctgtgggagcaggaggctggcagcactttgac
ttgcagacagagctaaggctcacctttgtgtacgacactgccatcttgtggcgagatggc
attggaactccaccagaggctgaactgcaaggtgccctctaccctaccagtatgcgcata
aatggcctggggcaactagtcgttaacttccgcactgaggctcgattcagaggcctgttt
gtgcttgcacatctagcttcacctctgacctcaatggtcatgtgtgcagaccatcctggt
ttaacatttaacctcagccttgttaggagtgagccaacctacagtcagcccattcaacaa
tggacattcatctctgattttgctgtgcgtgactactctggtttgtacacagtaaagttg
atcccctgtacttcccctccgagcttagagtacaccctccctcctgtctgcagtccaaga
gagcccctcacctttgatttggatatccgctttcaacaggttagcgatccagtggctgct
gaattcagcttaaacacgcagatgatcctgttgtccaaacggacactctggctgtcagat
ggctccatgggcttcggacaggagagtgatacggctttctcacagggtgatataatttat
gggagagtgatggtggatccagttcagaacttgggcgactcctttatttgcaatatagag
aaagtgttcctgtgcactggtgctgatggctacgttccaaaatacaaccctggaaacttt
gagtttggttgcctggctgatgctccatccctcctgtataggttcaaaattattgacaag
gcccagccagagacccaggcccattcctttggcaatgttgcctttaatgctttcctggca
gtggatgaccctggtgctttggttctggtcagacagtctggagcagatggtttcagaatg
gattctgcagctctctttcaggtggctgcagggagagagtggtacattcacacaatctac
acagtccgttcccgggacaatgcgaatcgggggatagggaagagaagcttggaatatcac
gcgatcagccagcattcagatcgcctgctgaagggtcaccatcgcaccagaaggtcttcc
agcgatgagcctgacatagttgacgggtttggcgtggaaaacaaccgtggtaccaacatc
ttgcacatctcactggaccgtagcagccagcagaagatgagtccagagaatgagatcttc
accaaaggaatcatcccccaggagctcaaccagagagacagtgacgataggcttgtgtta
atcattggggtctttgttggattgctcctcactgtgcttctcattattgtagtggtctta
ctggtgcggtctaagcaggagaagaaagaagtacccaggagctccaccagtacagaaccc
atgattactcaaagcctcagcaacagtgacagttctgaggtctaa
DBGET
integrated database retrieval system
