Poeciliopsis prolifica (blackstripe livebearer): 129358924
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Entry
129358924 CDS
T09758
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03440
Homologous recombination
pprl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129358924 (brca2)
03460 Fanconi anemia pathway
129358924 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129358924 (brca2)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129358924 (brca2)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129358924 (brca2)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
129358924 (brca2)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
129358924 (brca2)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
129358924 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
129358924 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
129358924
NCBI-ProteinID:
XP_054884160
LinkDB
All DBs
Position
Unknown
AA seq
3064 aa
AA seq
DB search
MDSCIKNMYDAFKERWKELGPLDPNWFELLTAQASLNEGSVADNDELCANQEGHFKAPLE
KTATESQLFSTPKVFRHSRIVSPDTADGPSFTAAQEKETLPWMPMQSPCLLQPPKQCVSN
LKCEGVQPQSEESFDLLDSPEKFPASYANHISESLGAQINPNISWTSSFNTPPALPSTLI
LSKTEESPCPVSVTADRKVIFVRKLFPSLSNSSLKTSRTALGPVFPVTDACAESPLNQSE
SHQQQKIPDALEGEVCSSDTPKTFFANSSSALRKVKPDRVKRKQIIQTNEDVCSHEDTSK
SDNAASSEEAIVDLNSGGLPSSPLMKTGDTAISQWSPLSLSEISTSVAGSSMTLPGDTDS
VQPTRPTLKITDSGFTQKKRKFVYTITTTKSQACGQDLEFQTRDPSLKISESEQENDKSF
VNTLDKEECQRTKNQRNILEETINSSLGTKLQHIDMSQLCREFAQDFSQMTDLKTVENTQ
RNFSPAACLSAMKQAKQNGKPANFPKDYSCISKDRLFPTSNQPCSMSEVTMIDSGFQSGV
ADVTHMASSSFGLPLLENVGQNQPKLSFKTGMHNFPSTNGSRKPKFDVEVPVQTSDTEQA
PDHGKGIELHILSMSTDELRDREETVGESKCTQPQKTPISFLPADASGFKTASNKGIHIS
LTNLEKAKHFFETTEDQKSSLDNSTKSHPGITYKSNLIHKETTDASSNSSLPACAGKSFG
NISSQLTASEKADVTELCILLEEADSQFEFTQFKPAKKLPNHDNHNSPQKEDNDLDPALL
ADIDFDDSFNSEGGKHSTVMMNDKVASVLENRTHGETSKAINQCTGMSDLLKRETPLNSL
LRNVSEDREFLKLGKPSILPGAKDTEATYEENNKALIHSEAFRTAGGNVLHVSKKCLNKA
KALFADLERNLTDQIPSDKQKGENAAIIEWKYNRGSDSFRKDSERKKENWGVGSKIENCV
SKLFPNKNVRNRNDTKSVKNNEIDTIICENGFRKASGKEISISSNYMQEADAFFKDCHVM
EHKESKKSFSNFKSPQVSISKKSVTGCTKLENVNIAVVSHHTKGQHLNEVERNGKFTAAL
KNEDRKSFLTSKSFTMLHPSKSTDSSAFEELCIGDGFSTAAGKNISVFAAAMKKDESLLN
QIHTPEEINKETNEKEKASKTKCLGDKISNLDAGGFQVVNGKEIAISSASLKKTTLLRES
EKSDNEICISSQQSSPKIPATPVTNLWSSGFSAASGKPVVLSSVALEKTQTLFSDISLIM
DKVEESAPVKKDKKHQTEPEKICSGFTTVGGENDQMSQEKFDDWVLAKAVQEEDALSTDG
VMLESVGSKKEDEKPHADQRFRTNTSVEAGKGCLRDADKEKKHNKNLLPQTSCGFKTASG
KKVEVSFEALKKAENLLGDCVGVMDTVNVALPESKAIDLPVRNDGFQSASSKPVALSSEA
LQKAKFLFSDISFRPQDPNTSQVKKSGKNQNTSNNTEKMSCGFTTARGEKVDVLQKNLQK
AKVLFKELDDQVLSKVAQEEDAFSPPLKKATLLRECEKSENEICFSSSNCDMDINKEMSE
NDLKGKVHMQRSRKAGLAKCYTDDKMRVSISIPEYSSDANKQVEQRENILPQASRGFQTA
SGKRVDISSEALKKAENLFCEFEGIWDKTNAMSSQSKSSALLLRNSGFHSASSKPVAPST
EAVQKAKSLFGDITFSTEDSDFSQTVKADGKLDSRSKTEKICSGFTTAKGEKVDVSQKNL
QRAKFLFKEVDDFTLTKAMQDADQFFNQVEGWTMDSNSEKSSEQTNAAPVDESGSIKGNM
SEFRTNTGSICEEPENGSIKAKRKEGGFQMASGKTVAVSSEALLRAKLLLSENKADEEST
CVFAASGKPFSHEALQKAKTFFSIGVKSLPSAADSRRDDHIENKSHLSIRDSNAKSSNQI
SDIIETNKSSDPKFQSLNLTGCTETQHKFLAQEALDCTKALLEDEVLVGQSLLTTSENLQ
LQDDQELNKKSAEGDKGRKRSAEDLTAQPPSKRRLLEEFDRTADNPRGSGLHPVKSGPNG
IMDRSVFRYSTFLHPNITKPNRDAKSFVDTRLQRTIQMPHSDQGDSRSAACKMLTFVPPF
FRNTKKDALNKPEARDRKKVPAFVPPFKKPKVVQQESFPKQQEDNKQHHSLCLETNSKTD
APLTKTTQSCEEVVTFASTSNSKIINQSVPLKVGSISSTQMLHVDDKFSGSQDKTENFGL
ARDMQDMRIRKKKRQIIRPVPGSLFLTKTSGVTRIPLKAAVNGNIPARYSAQKLYECGVH
KYVPEITGENAESFRFNLLQFVKQETLANGGGVQLADGGWLIPRDDWTAGKEEFYRALCD
TSGVDPNLISEQWVYNHYRWIVWKQASMERSFPETMGSLCLTPEQVLLQLKYRYDVEVDH
SRRPALRKIMERDDTPAKTLVLCVCEIISQGQLHAQSCSNTKMSQNAETKVETPVAVVRL
TDGWYAIKAQLDEPLTAMLHKGRLAVGGKLVIHGAQLIGSQDGCSPLEAPDSLMLKICAN
STRRARWDAKLGYYTDPRPFLLPVSCLYSNGGPIGCVDIFILRSYPMQWMERKSNGGVVF
RSVWAEEKEARRFNSHKQKAVELLFAKVQAEFEKEEEEGSIKRQRRRQTVGKQDIGNLQE
GEDLYEALGDDPAYLEAHLSEQQLESLQAYRRSLMEKKQAELQDRCRRALDAEDNEMSCP
KREVTPVWRLCIADSRIQSSCVYQLNLWRPSSDLQSLLKEGRRFKVYNLVASDGKRRSSV
ETVQLTGTKKTQFQELQVSQEWVSSHFWQRISTDFVDLQNEDFKPLCGEVDLTGLVISVV
DQQGSSPAFYLVDGKKIFVKVRCFSSLSQAGLEDIVKPRVLLALSNLQLRGQSIHPTPVL
YAGDLTAFSTNPKEIHLQESLNQLKNVVQSQDNFFMTAEEKLAHLIKTDGSCSLSFQPQT
PVGVRRQDSKTNVAFLKPIKNLGSFTPVSSNLPAATSSTEKDSKSLKRKRALDYLSRIPS
PPPISPLGSVVSPCVNKTFNPPRRSGPVQTAAPKATDSLVEDEWVNDEELAMIDTQALHA
GNLF
NT seq
9195 nt
NT seq
+upstream
nt +downstream
nt
atggattcatgcattaaaaacatgtacgacgctttcaaagaaaggtggaaagagctggga
ccgttggacccaaactggtttgagttactgacagcccaagcttctttgaatgaaggaagt
gttgccgataacgatgagttgtgcgccaaccaggagggacatttcaaggctcctctggag
aagacggcaacagaaagccagctgttttcaacccctaaagttttcagacacagtcgaatt
gtgtcaccagacactgcggatggtccttcgttcacagctgcacaggaaaaagaaacgtta
ccatggatgccaatgcaaagtccctgtttgcttcagccgccaaagcagtgtgtctctaat
ttaaaatgtgaaggtgttcagcctcagagtgaggagagttttgatcttctggattcccca
gagaaattccccgctagctatgccaaccacatttctgaaagtctcggcgcacagatcaat
cctaacatttcttggaccagttcttttaatacaccaccagctttgccatctactctaatt
ttatctaaaactgaagagagtccctgtccagtgagtgttactgcagacagaaaggttatt
tttgtacggaagctttttccttcactttcgaattcctcccttaagacatcaagaacagcc
ctaggtccagtttttcctgtgactgatgcctgtgccgagtctccattgaaccagagtgaa
agtcatcaacaacagaaaattccagatgctctggaaggagaagtttgtagctcagatacc
cctaaaactttctttgctaatagcagttctgctctgagaaaagtgaaacctgacagggtt
aaacgtaaacaaataattcagacaaatgaagacgtctgcagccacgaagatacctcaaaa
tcagacaatgctgcatccagtgaagaggcaattgttgatctgaactctgggggtttgcct
tcatccccactgatgaaaactggagatacggcaattagtcagtggtctcctctaagtcta
tctgaaatctcaacttctgtggcgggaagcagtatgacactgccaggggacactgactct
gtgcaaccaaccaggccaaccctgaaaattaccgactctggatttactcaaaaaaagaga
aaatttgtttacactatcacaaccacaaaatcgcaagcttgtggtcaagacttggagttc
cagacaagagatccctcactaaagatttcagagtctgaacaagaaaacgacaagtcattt
gtgaacaccctagataaagaagaatgtcagaggactaaaaatcaaagaaatattttagag
gaaaccataaatagttctcttggaacaaaactccagcatatcgacatgtcacaactttgt
cgagagtttgcacaggacttcagccaaatgacagacttaaaaactgtggagaacacgcaa
aggaacttctctcctgcggcatgtctgtctgctatgaaacaagcaaaacagaacggaaag
ccagctaattttcccaaagattacagttgtatcagtaaagacagactcttccctaccagt
aatcaaccatgctcgatgagtgaagtcactatgattgacagcggattccagtcaggtgta
gcagacgtcacccatatggcttcctcgtcatttggtcttcccctcttagagaatgttggc
caaaaccaaccaaagctgagtttcaaaactggtatgcataatttcccctcaaccaatgga
agtagaaagccaaaatttgatgttgaagtgcctgtgcagacatctgacacagagcaggct
ccggatcatggaaagggaattgagttgcacatactgagcatgtcaacagatgaattacgg
gacagagaagaaactgttggtgaaagtaaatgtacccagccacaaaaaactcctatttct
tttctgcctgctgatgcgtcaggattcaaaaccgcctcaaataaaggcatccacatttcc
cttaccaacctggagaaagcaaagcatttttttgaaacgactgaagatcaaaagtcttct
cttgataacagcacaaaatcccatcctggcattacttataaaagtaatttgattcataaa
gaaacaacagatgcatcatctaactcaagcctgcccgcttgtgccggaaagtcatttgga
aatatcagttcccagttaacagcctcagaaaaagccgatgtgacggaactttgcattctc
ttggaagaggcagacagccaatttgagtttacacaattcaaacctgcaaaaaaactgcct
aatcacgataatcacaattctccacaaaaagaagacaatgatcttgaccctgctctgctt
gcagatatagactttgatgacagttttaattctgaaggtggaaagcactctacagtcatg
atgaatgacaaagtggcctcagttttagaaaacaggacacatggagaaacatcaaaagcc
ataaatcagtgcacaggaatgtcagatttgctgaaaagggaaactccattaaattctttg
ttacggaacgtttctgaagacagggaatttctaaagttaggtaaaccaagtattcttcct
ggggctaaggacactgaagctacatatgaggagaacaacaaggctttgatccatagtgag
gcatttaggacagcaggtggcaatgttttgcatgtctctaaaaagtgtctgaacaaagcc
aaagctttgtttgcagatctggagagaaacttgacagatcagataccttctgataagcag
aaaggggaaaatgctgccataatagaatggaaatataaccggggttctgactcgttcaga
aaagattcagaaagaaagaaggaaaactggggtgtcggaagcaaaattgagaattgcgtt
tccaaattatttccaaataaaaatgttagaaacaggaacgacactaaaagtgtgaaaaat
aatgaaattgacacaataatctgtgaaaatggtttcagaaaggccagtggaaaagaaatc
tccatttcatctaactacatgcaagaggcagatgcatttttcaaagactgccatgtaatg
gagcacaaagaaagcaagaaaagcttttcaaacttcaaaagccctcaggtcagcatttct
aagaagagcgtcactggatgcactaaacttgaaaatgtaaatatagctgtggtctcacat
catacaaaaggacaacatctgaatgaagtggaaagaaatggcaagtttacagcagctttg
aaaaatgaagacagaaaatcttttctgacttcaaagtcgttcactatgcttcacccatca
aagagcacggattcatctgcttttgaagagctgtgcataggtgatgggttttctacagcg
gctgggaagaacatcagtgtgtttgctgctgctatgaagaaggatgaatcgcttttgaat
cagattcacacacccgaggagataaacaaagaaactaatgaaaaagaaaaggcttcaaaa
acaaaatgccttggtgataagatatcaaacctagatgctggtggtttccaagttgttaat
ggaaaagaaattgcaatttcatcagcatctttaaagaaaacaactctgctaagagaaagt
gaaaaatcagataatgaaatttgtatttcctctcagcaatccagtcccaagataccagct
accccagttactaatctctggagcagtggtttttctgcagccagtggtaaacctgttgtc
ttgtcatcggtggccttggagaagactcagacactgttcagtgacatcagtttgatcatg
gataaggtggaagaatctgctccagttaaaaaggataagaagcatcaaacagaaccagaa
aaaatatgctctggttttacaactgtaggaggagaaaatgaccaaatgtcacaggaaaaa
tttgatgattgggttttagccaaagcagtgcaagaggaagatgctctctccaccgatggt
gtaatgctggagagtgtggggagcaagaaggaagatgaaaaacctcatgcagatcaaaga
tttagaacaaacacatctgtagaggctgggaaaggatgcttgagggatgcagataaagaa
aagaaacacaacaagaaccttttaccacaaacaagctgtggatttaagacagcaagtggg
aaaaaagttgaagtttcatttgaagctctgaagaaagcagaaaacttgttaggtgactgt
gtaggagtcatggatactgtgaatgtggcactgccagaatccaaggctattgatcttcca
gtcagaaatgatggatttcaatctgccagcagtaaacctgtagcactttcatcagaggcc
cttcaaaaagcaaaatttctcttcagtgacatcagtttcagaccacaggacccaaatact
tcacaggtgaagaaaagtggcaagaatcaaaacactagcaacaatacagagaaaatgtct
tgtggtttcacaactgcaagaggggaaaaagttgatgtgttgcagaaaaatcttcaaaag
gcaaaagtacttttcaaagaacttgatgatcaggttttaagcaaagtggcgcaggaggaa
gatgctttctcaccacctttaaagaaagcaactctgctaagagaatgtgaaaaatcagag
aatgaaatttgtttttcctcttccaactgtgatatggacattaataaggaaatgtcggaa
aatgacttaaagggtaaagtacatatgcagagaagcagaaaggcaggtcttgcaaaatgt
tacacagatgacaagatgagggtaagcatttctatccctgagtactccagtgatgcaaac
aaacaagtggaacaaagagaaaacattttaccgcaagcaagccgtggatttcaaacagcc
agtgggaaaagagtcgatatttcatctgaagccctaaagaaagcagaaaacctgttttgt
gagtttgaaggaatttgggataaaacaaatgcaatgtcatcacagtccaagtcttctgct
cttttactcagaaacagtgggtttcattctgccagcagtaaaccagtggcaccttccact
gaggctgttcaaaaggcaaaatccctctttggtgacatcactttcagtacggaggactcg
gatttttcacagacagtaaaagctgatgggaaactagacagtcgaagcaaaactgagaaa
atatgttctggttttacaaccgcaaagggagaaaaagttgatgtgtcgcagaaaaatctt
caaagggcaaaattcctctttaaagaagttgatgatttcactttaacaaaagcaatgcaa
gatgcagatcagtttttcaaccaagtagaaggttggactatggacagtaacagtgaaaaa
tcatcagaacaaactaatgcggcacctgttgatgaaagtggcagcattaagggaaacatg
tccgaattcagaacaaataccggcagtatttgtgaagagcctgaaaacggttctatcaaa
gcaaaacggaaggaaggtggatttcagatggcaagtggaaaaacggttgctgtttcatct
gaagctctgttgagagcaaaacttctgctgagtgaaaacaaagcagatgaggagagcact
tgtgtttttgcagcaagtggtaaaccattttcacatgaggccttacagaaagcaaagact
ttctttagcattggtgtgaagtcattaccttcagcagcagacagtcgacgtgacgaccac
atagaaaacaagtctcacttgtcaattcgcgattcaaatgctaaaagcagcaaccagata
tctgacattatagagacaaataaatcttcagacccaaaatttcagtcactaaacctcact
ggctgtacagaaacacagcacaagtttcttgcccaggaagctttggattgcacaaaagcc
ttactagaagatgaagtactagttggtcaaagtttgttgacgacttcagaaaatttgcaa
ctgcaagatgaccaagaattaaataaaaaatcagctgaaggggacaaagggaggaaaaga
agtgctgaagatctcactgctcagccaccttctaaaagaaggttactagaagagtttgac
agaacggctgataatccacgaggttcaggactccacccagtgaaaagtggcccaaatggg
ataatggaccggagtgttttcaggtacagcacctttcttcatccaaacattacaaagcca
aacagggatgcaaaaagctttgtggacacaagattacaaaggacaatccaaatgccgcat
tctgaccaaggagatagtcgatctgcagcctgcaagatgctgacatttgtccctccgttt
ttcagaaacacaaagaaagatgcactcaataaaccagaggccagagaccgcaaaaaagtg
cctgcatttgttccaccattcaaaaaaccaaaggttgtccaacaagaaagcttccctaaa
caacaggaggacaataagcagcatcactctttatgtttggagaccaacagcaaaacagat
gcaccacttactaaaacaacccaaagctgtgaagaagttgtcacttttgccagcacttca
aactctaagataattaatcaaagtgttcctctaaaagtgggatctatcagctctactcaa
atgctacatgtggatgacaagttttccggaagccaagacaagactgagaactttggactg
gcccgggacatgcaggacatgaggattaggaaaaagaagcggcagatcattcgaccagtg
cctgggagcttatttttgacaaaaacctcaggggtgacgagaatcccattaaaagctgcg
gtcaatggaaatatcccagcaagatactcggcccaaaagctgtatgagtgtggagtccat
aagtatgttccagagatcaccggtgagaacgctgaatcatttcgcttcaatttgctgcaa
ttcgtcaaacaagaaacattagccaatggaggtggtgttcaactcgctgacggaggctgg
ttgatccccagggatgactggacagccggaaaagaagaattctatagagcattatgtgac
acttctggagtggatcccaacctgatcagtgagcagtgggtgtacaatcactacaggtgg
attgtgtggaagcaggcctccatggagagatcatttccagaaacaatgggcagcctttgc
ctcaccccagagcaggttctcctccagcttaagtacagatatgatgtagaggtggaccac
agccgcagaccagctttgaggaaaatcatggaaagagatgatacgccggccaaaactctt
gttctctgtgtctgtgagatcatttctcaaggtcagctacatgcacaaagctgcagcaac
actaagatgtcacaaaatgctgaaaccaaggtggaaactccagttgcggtcgtgcggctt
acagatggctggtatgccatcaaagctcagctggatgagccattgactgcaatgcttcac
aaaggtcggcttgctgttggtggcaaattggtaatccatggagcacaactgataggatca
caagatggttgctcccctttggaagcaccagattctttaatgttgaagatatgtgccaat
agcactagacgtgcacggtgggatgctaagctgggatattacacagatccacgaccattt
ctgcttccagtctcctgcttgtatagtaatggagggccaataggatgtgttgacatcttc
atactgagaagctatcccatgcagtggatggagaggaaatctaacggaggtgttgtgttt
aggtccgtttgggcagaagagaaggaggcaagacgattcaacagccacaaacagaaagca
gtagagttgctgtttgccaaggttcaagctgaatttgaaaaagaagaagaagaagggagt
atcaaacgtcagcgcagaaggcaaacggttggcaagcaagatatcgggaacctgcaggaa
ggagaagacttgtatgaagcacttggagatgatcctgcttacctggaggctcatttaagt
gaacaacagctggagagtcttcaggcctacaggcgctcactgatggaaaagaagcaggct
gagctgcaggacagatgccggcgtgctcttgatgcagaagacaatgaaatgagctgtcca
aaaagagaagtgacacctgtttggagactttgcatcgctgactcaaggattcagtccagc
tgcgtttatcagttaaacctttggcggccttcttcagacctccagtctttgctgaaggaa
ggtcgtcgattcaaagtgtataaccttgttgcctctgatggaaagagacgtagcagcgtt
gaaactgttcagctgaccgggacgaagaagacacagttccaggaacttcaggtgtcccaa
gaatgggtgtcctcgcatttttggcaaagaatctccacagattttgtagatcttcagaat
gaggatttcaagcctctgtgtggagaagttgatctcacaggattagtcatcagtgttgta
gatcaacagggttcctctcctgcattttatttggttgatgggaaaaaaatttttgtgaaa
gttcgctgcttcagcagcttgtctcaagctggccttgaagacatagtgaaaccacgtgtt
cttttggcactgagtaacctgcagctcagaggccagtctatacaccctactccagttctc
tatgctggggatctgactgccttctctacaaaccccaaggagattcatctacaggaatcc
cttaaccaactcaaaaatgtggtacagagtcaggacaacttctttatgactgctgaggaa
aagcttgcccatttaatcaagactgatggatcctgctctttatccttccaaccccaaacg
ccagtcggcgttagaagacaagactcaaagacaaatgtggcctttctgaaaccaatcaaa
aacctcggatcgtttacgcctgtcagcagtaaccttccagctgcaacatcttcaacagaa
aaagactccaaaagcttgaaaagaaaaagagctttggattatctttctcgcatcccgtct
ccaccacccatctcccccctgggctcagtggtgtctccttgtgtaaataaaacgttcaac
cctcctcgaagatcagggcctgtacagactgctgcaccaaaagcaactgattctctggtg
gaggatgaatgggtgaatgatgaggaactggctatgattgatactcaggcgttgcatgct
ggcaatttattttag
DBGET
integrated database retrieval system
