Poeciliopsis prolifica (blackstripe livebearer): 129358932
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Entry
129358932 CDS
T09758
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129358932 (trpc4b)
Ion channels [BR:
pprl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129358932 (trpc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
CENP-F_N
Motif
Other DBs
NCBI-GeneID:
129358932
NCBI-ProteinID:
XP_054884178
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MTEMFHKRNDNSAYNDRRPLRIVRAEAELSPMEKVYLGAVERGDYASVKQALDEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSYNIHVGDALLHAIRKEVVGAVELLLNHKR
PRGEKQIPPILLDRQFSDFTPDITPIILAAQTNNYEVIKLLLQRGVSVPLPHAVRCNCMD
CMSNTDVDSLRRSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELKELSTVENEFKSE
YEELSHMCKQFAKDLLDQTRSSKELDIILNYRDDIDPLMDENNNDLARLKLAIKYSQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKLITCAFIGLLFPLLSVFYLLLPKTRYGQFIR
KPFIKFICHTSSYLTFLLLLFLASQHIDSGDPECRAANFQGPAPTTVEWLILPWVIGFVW
AEIKQMWESGIRDYMDDWWNIMDFIMNSLYLATISLKIVAYTKYRGYRPRDSWEMLHPTL
IAEALFAIANIFSTLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYYYYATEGEKNCYGIRCQTQNNAFSTLFETLQSLFWSVFGLISLYVTNVKANHTITKF
VGSTMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPS
PFNIIPSPKSVFYLLKWIKTNMFKKPGKASVKSFEILGARAAENVKLNHEYQRVLKNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKSKPHSGGTSPVASTTLAYPG
NSFKYCRKPAASERQKESQTLEVKSPTMPQSKAATIANSPGSNDQHNCSVIVWSAEKTEI
EISKEQSKGECSPKREQTSFLKRNEKNPYFVASGGQNQNKALSGKADAEISQNMNTETQE
IGLSCTVLTKEVTNGPKKKMQN
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatgtttcacaagagaaacgacaactccgcatacaatgaccgtcgcccactg
cgcattgtgcgggcagaggctgagctctctcccatggagaaggtctacctgggggccgta
gaaagaggggactacgcgagtgtaaaacaagcgttagatgaggctgagatctactttagg
atcaatatcaactgcatcgacccgctgggacgcacggccctgcttattgccatcgaaaac
gagaacctggagatcatagagctcctgctcagctacaacatccatgtgggcgatgccctg
ctgcacgccatacgtaaggaagtagtgggggccgtggagctgcttctcaatcacaagagg
ccacgtggagaaaaacagatccccccaattctgttggacagacagttttcagacttcact
ccagacattactccaatcatccttgcagctcagaccaacaactatgaggtcatcaaattg
cttctgcaacgaggtgtttccgtacctctgccacatgctgtgcgttgcaactgcatggac
tgcatgtccaacacagacgtggacagccttcgtcgctcacgttctcgtcttaacatctac
aaggctctcgccagcccgtctctcattgccctctccagtgaagatccattcctgacagct
tttcagctcagctgggagctgaaggagctcagcacagtggagaatgaattcaagtcagag
tatgaagagttatcccatatgtgcaaacaatttgcaaaagaccttctggatcagactcga
agctccaaggagctggatataattctcaactaccgtgatgacatcgatcctctgatggat
gagaacaacaatgacctcgcccgtttgaaactggcaatcaaatactcccagaaggagttt
gttgctcaacccaactgtcagcagcttcttgcgtctcggtggtatgatgagttcccaggc
tggaggaggcgtcactgggcagtgaaactcatcacctgcgctttcattggcctcctcttt
ccactgctttctgtcttctacctgttacttccaaagactcgctatggccaattcatccgt
aaaccttttatcaagtttatctgccacacttcttcctacttgaccttcctcctcctgctc
ttcttggcctcacagcatatcgactctggtgacccagaatgccgggctgccaacttccag
ggcccagcccccaccactgtggaatggcttatcctgccttgggtgattggtttcgtttgg
gctgagatcaaacaaatgtgggaaagtggtataagggactacatggatgattggtggaac
ataatggacttcataatgaactccttatatcttgcaactatttctctaaaaattgttgca
tatacaaagtacagaggatacagaccgagagacagctgggaaatgttgcaccccacgttg
atagcagaggccttgtttgccattgctaacatcttcagcaccttacgtctgatcagtctt
ttcactgccaactcacatttgggtcctttacagatttcacttggccgaatgcttctggac
atcctcaaatttctgttcatctactgtctcgtgcttttggcttttgcaaatggccttaac
cagctctattattactatgcaacagagggtgaaaagaactgctacggtattcgatgtcaa
acccaaaataatgccttttcaacgttgtttgaaacactccaatcattattctggtctgtg
tttggcttgatttctctctacgtgaccaatgtgaaagcgaaccatacaattacgaaattt
gttggctcaactatgttcggcacctataatataatctccttggtggtgcttctgaacatg
ctgattgcaatgatgaacaattcctaccagcacattgctgatcatgcagacatagaatgg
aaatttgcacggacaaaattatggatgagctattttgaagagggcgggactttaccatct
ccgttcaatataataccgagtccaaaatctgtgttttatctacttaagtggataaaaaca
aatatgttcaagaaaccaggcaaagcatcagtgaaatcatttgagatattaggggcgcgg
gcagcagaaaatgtcaaattaaaccatgaatatcagcgggtactgaagaaccttgtgaag
cgatatgttgctgcaatgatcagagatgccaaaaccgaggaagggttgacagaggaaaac
tttaaggagcttaagcaagatatctccagcttccgctatgaagttttgggaatgatgaag
agtaaacctcacagcggcggaacaagtccagttgcaagcacaacgttggcttatcctgga
aattccttcaaatattgtcgtaaacctgctgccagtgaacgtcaaaaagagtcacagaca
ttggaggtaaagtctcccactatgcctcaaagtaaagctgccaccatagccaactctccg
ggctcgaatgatcaacacaattgttctgttattgtgtggagtgcagaaaagactgagatt
gaaatatcaaaagagcagtcaaagggcgagtgctctccaaaacgggagcaaacgtccttt
ttgaaacgtaatgaaaaaaatccctactttgtggcatctggtgggcaaaaccaaaataaa
gctctgagtggtaaagcagatgcggaaatttcacagaatatgaacacagaaactcaggaa
atagggctttcttgtactgtcctgactaaggaagtgacaaatggtccaaaaaaaaaaatg
caaaactga
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