Poeciliopsis prolifica (blackstripe livebearer): 129358936
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Entry
129358936 CDS
T09758
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129358936
03041 Spliceosome [BR:
pprl03041
]
129358936
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129358936
Spliceosome [BR:
pprl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
129358936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129358936
NCBI-ProteinID:
XP_054884183
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MDAVNAFNTELFAMIEMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVEKDVFGPRFLKNFSDTFRNLYCCPEDDKNKIIRVLNLWQKN
GVFDMEILQPLMDMANGTVVPHSATEVPVNPQLESTSLTGNASDVPSVLPTPEALAAVAQ
LFQSSHAQELQRMLQNFQQAERTVGTSTIANNITNQHQMPVTQPNPRFDSVKKGSLAEKL
LDRFDYDDEPEDMAVSEGKIQTQGIPENMSNQFPVQMRNTDPDMLGRNRDTKHSGGMSHV
EQNLTPDGFNSGKESESWENSRENSSTRQEGRDRDYNARSRSSSRSPRRRRSRSSSRSRW
SRHRHSRSRERRWRSRASSEDQSDREKDRERRQKGLPSLKSQTLSVCSTTLWVGQLDKKT
QQSDVMSLLEEFGQIESINMIPPRGCAYIVMVHRQDAYMALKKLSKGSYKANQKPTKIAW
ALNKGIKSAHKKFWDVEQGVTYIPWSKVKVEELESYQEGGMLDPETLNPEWNSAKEVKSQ
VAVNGAMEIVPDVAVSAHVQMPAVPQCEPIGSPPAFPAPIILSPTSLPPRGGPFLHTEFD
AAHQVGGNFEAPVESTAGLTGGNDPSSAIGSDNQLGSPTGQVMMLPNPAVMHGPSRSGIQ
GPLTPGMQCPPRPGIQGPPRPGIQGPPSPGMRGPARMGMQGPPRPGMPPLQPPLGMPNPH
MPPFPGPPNMHRMPSQMMPGGPMFLSDRFRMPMPFPPRGPPFQQHPSMGPEIMDDGERGQ
FRAVRPGFGRPPFQRGRW
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtgaacgcgttcaacacggagttgttcgctatgatcgagatgaagcctcca
atatcccgggctaaaatgatgtctgttaccaaatcagctattaaagccattaagctgtac
aaacatgttgtccaaattgttgaaaagttcatcaagaagtgcaagccagaattgaaggtt
cctggtctatatgtggttgattccattgtacggcagtcacgccatcagtttggtgttgaa
aaggatgtttttggaccccggtttttgaagaacttctcagatactttccgaaacctttac
tgctgtccggaggatgacaagaataaaattatcagagtgctaaatctctggcagaagaat
ggtgtgtttgatatggagatccttcagcctcttatggatatggccaatggcactgttgtc
ccacattctgctacagaagttcctgttaacccccaactagagtctacatctctgactggt
aatgcttcagacgtaccgtctgtcctacccactccagaagctttagctgctgtggcacaa
ctctttcagtcctctcatgctcaggagctgcagaggatgctccagaactttcagcaggct
gaaagaacagttggaacatctacaattgcaaataacataacaaaccaacatcagatgcca
gtaacccagcccaacccaaggtttgattctgtgaagaaaggttctttagctgagaaacta
cttgaccgatttgactatgatgatgaacctgaggatatggcagtgtcggaaggcaaaatt
cagacacaaggtatacctgaaaatatgtcaaaccagttccccgttcagatgcgaaacaca
gaccctgatatgttgggtcggaatagagacacaaagcatagtggaggaatgagtcatgtt
gagcaaaatttgacacccgatggatttaattctgggaaagagtctgaatcatgggaaaac
tcaagagaaaattcttccacgaggcaggaggggagagacagagactacaatgcgagatcc
agatcttcttctagatccccaaggagaagaagatcgagatcttcatctcgctcaaggtgg
tcaaggcacagacactctcgctccagagaacgccgctggagatctcgagctagttcagag
gaccagagtgacagagagaaggacagagaacgcagacagaaaggtcttcccagcttaaag
agccaaactctcagtgtttgcagtaccacactttgggttggacagctggacaagaaaacc
cagcaatctgatgtaatgtcccttttagaagaatttggtcagattgagtccatcaatatg
attcctccgagaggttgtgcctatattgttatggttcacagacaagacgcttatatggcc
ttaaaaaaactcagtaaagggtcgtacaaagccaaccagaaaccgactaagattgcttgg
gctttaaacaaaggcataaagtcggcacacaaaaagttctgggatgtggagcaaggggtt
acttatattccttggagcaaagtcaaagttgaagagttggagagctatcaggagggtggc
atgctggatccagaaaccctaaatccagagtggaatagtgccaaagaggttaagagccag
gtagctgtaaatggagcaatggaaatagtaccagatgtggctgtcagtgctcatgttcag
atgcccgcagttccgcagtgtgaaccgattggaagtccgcctgcttttccagcccccatc
atcctttcaccaacgtcattacctccgagaggaggtcctttcttacacacagagtttgac
gccgcacatcaagtaggagggaattttgaagctccagtggagtccactgcaggtcttact
ggaggcaacgatccctcctcagctattggttctgacaaccagctgggttctccaacagga
caggttatgatgctgccaaatcctgcagtcatgcatggtccctccagatcaggaatccag
ggtcccctcacaccgggaatgcagtgccctcccagaccgggaatacagggtccacccaga
ccaggaatacagggtccccccagcccgggaatgcggggtcctgccagaatgggaatgcaa
ggtccccccagaccgggaatgccacccctgcagcctccccttggcatgccaaaccctcat
atgcctccctttcctggtccaccaaacatgcaccgcatgccctcgcaaatgatgccagga
gggccgatgtttctgtcagatagattcagaatgcccatgcccttccctcctcggggtccc
ccttttcaacaacatccatcaatgggaccagagattatggacgatggggaaagggggcaa
ttccgagccgttagaccaggatttggacgcccaccgtttcaaagagggaggtggtag
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