Poeciliopsis prolifica (blackstripe livebearer): 129358939
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Entry
129358939 CDS
T09758
Name
(RefSeq) tripartite motif-containing protein 3-like isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129358939
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129358939
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
TEN_NHL
Invasin_D3
RING_XB3-XBAT31
CRLF3_N
zf-C3HC4_4
zf-ANAPC11
Prok-RING_4
Mala_s_1-like
Baculo_PEP_C
YtkA
FTR1_4HB
DUF7605
Motif
Other DBs
NCBI-GeneID:
129358939
NCBI-ProteinID:
XP_054884189
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MSLIMAKRETGSTSPVVRQIDKQFLVCSICLDRYHNPKVLPCLHTFCEKCLQNYIPPQSL
TLSCPVCRQTSILPEKGVAALQNNFFITNLMEVLQRDTECSRAEACNVLESVNAASTCQP
LSCPNHEGKVMEFYCESCETAMCLECTEGEHREHVTVPLRDVLEQHKSVLKNQLDTVRNR
LPQLTAAIGLVSDISKQLTERKNEAVTDISNTFDDLEKALHQRKTALITEVENICSTKQK
VLQTQLTSLLQGKENIESSCSFTEHALSHGSATEILLVQKQMGERVSALARHSFPEHPHE
NGHLECQVETDGLRRSIQNLGVLITTGAVGHTSVATGEGLRHAVVGQHTTITVTTKDKDG
ELVKSGNAVLKAEIVSADGVCTEAEVVDNKNGTYEVGYSLRSEGEFTFSLLLYEQPVRGS
PFRLRAVKPSDVLQSPEDVKRRVKSPSGGGGHVRQKAVRRPSSMYSTTKKKENPIEDELI
YRVGTRGRDKGEFTNLQGISASSNGRIVVADSNNQCIQVFSNDGQFKMRFGVRGRSPGQL
QRPTGVTVDMNGDIIVADYDNRWISIFSSDGKFKSKIGAGRLMGPKGVAVDKNGHIIAVD
NKACCVFIFQSNGKLVTKFGARGTSERHFAEKSGANIALESKLSKSGPLFSPHFVAVNNK
NEIVVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDANGNIIVADWGNSRI
QVFDSSGSFLSYINTSADPLYGPQGLALTSDGHVAVADSGNHCFKVYRYLQ
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcatcatggctaagcgtgagaccggcagcaccagtcccgttgtcaggcagata
gacaagcagttcttggtctgcagcatctgtttggatcggtatcacaaccccaaggttctg
ccttgcctgcatacgttctgtgagaaatgtctacagaactacatccctccccagtctttg
acactgtcctgtccagtatgcagacagacgtctatcttaccagagaagggcgtggcggcc
cttcagaacaacttcttcatcacaaacctaatggaagtgttacagcgagacacagaatgc
agtcgagccgaggcgtgtaacgtactggagtcagtcaacgcagcctcgacctgtcaaccc
ctttcttgtcccaaccatgaaggaaaggtaatggagttttactgtgaatcatgtgagaca
gccatgtgtctggagtgcacagagggggaacacagggaacatgtgaccgttcctctgagg
gatgtgctggagcagcataagtcggttcttaaaaatcagttggacactgtgcgcaacaga
ttacctcagctgaccgctgccatcgggctggtcagcgacatctccaagcagctaacggag
aggaaaaacgaggcagtcactgatatcagtaatacttttgacgatcttgagaaggcattg
caccaacgcaagactgctctcattacagaggtggaaaacatctgcagcaccaagcagaag
gtgcttcaaacccagctgacgtctttgcttcagggcaaagagaacattgagagcagctgc
agcttcacagaacatgctcttagccatggcagcgccaccgagatccttctggttcagaag
caaatgggcgagcgggtcagcgctctggcgagacacagcttccctgagcatcctcatgaa
aatggacatctggaatgccaggtagagacggacggactgagacgttctattcagaacctg
ggggtcctcatcacaacgggggccgtgggccatacaagcgtcgccactggcgaaggcttg
cgacacgcagtagtcggccagcacaccaccattacggtcacgaccaaagacaaggatgga
gaactggtgaaatctgggaatgctgttctgaaggcagaaatagtttctgcagatggagtt
tgcactgaagctgaggtggtggacaacaaaaatggcacctacgaggttgggtattccctc
cgctctgagggagaattcaccttctctctgctgctatatgaacagcctgtgagggggagt
ccgttccgcctccgggccgtcaaaccgtcagatgtcctgcagtcgccagaggatgtgaag
agaagagtgaagtccccgagcggaggagggggccatgtccgtcagaaggctgtacgcagg
ccctccagcatgtatagcaccaccaagaaaaaggagaacccgatagaggatgagctgatc
tacagagttgggacaagagggcgcgacaaaggagagttcacaaatcttcagggcatctca
gcctccagtaatggccgcatcgtggtggcagacagcaacaaccagtgcatacaggtattc
tccaatgatggccagtttaaaatgaggttcggcgtgcgaggtcgatctccgggacaactg
caacgtcccacgggagtaacggtggacatgaacggagacataatagtggccgactatgac
aacagatggattagcattttctcctcggacgggaagtttaagagtaaaatcggtgctggg
agattgatgggacctaaaggtgtggctgtggataaaaatggacacataatcgctgttgat
aacaaagcctgctgtgttttcatcttccaatcaaatgggaagctggtgacaaagtttgga
gccagaggaacctcagagcgacactttgcagagaaaagtggtgcaaacattgcactggaa
tcaaagcttagtaaatctggccctcttttcagtcctcactttgtggctgttaacaacaaa
aatgagattgtggtaacagactttcacaaccactcagtcaaggtgtacaatgctgatggg
gagttcctgttcaaatttggctcccatggtgaggggaacggccagttcaacgctccaacg
ggcgtggctgttgatgccaatggaaacatcattgttgcagactggggcaacagtcgcatc
caggtgtttgacagctcagggtctttcctctcctacatcaacacgtcggctgacccgctg
tacggccctcagggcttggccctaacatccgacggccatgtggcggtggcggactccggg
aaccactgctttaaagtctaccgctacctgcagtag
DBGET
integrated database retrieval system
