Poeciliopsis prolifica (blackstripe livebearer): 129359190
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Entry
129359190 CDS
T09758
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129359190
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
129359190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
129359190
NCBI-ProteinID:
XP_054884618
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MQMFCWGDSSSGQFGVQAALSPVSWTGPGTVTDICCGEQHTLFLRADGKVLSCGHNSQGR
LGRRNQSGKMLGSVEGLGDVVAMACGQDHCLAVCSSGQVFSWGAGEDGQLGLAQRHPSNN
LRPSRVPIPLPIQVIQVACGNSHSLALTKGGDVFSWGLNSHGQLGLGKDVTLQNRPDLVY
ALTGVAVTQVAAGGSHTLFLTLSGLTYCCGANKSGQLGLNRVDEKGRFNVCVVPALRPLG
VSSISCGESHTAVLTKDGKVFTFGDGSHGQLGHNSTTTEVRPRLVDGLGETASQVACGRR
HTLVLTSSGRLFAFGNGDKGQLGTGQRDSSSSPSVVQLPWASDRAAATPSDLKLSAGWDT
NFIYTSPAKTFNNGQPIGRLDETKLQKWVAKKCSNIEAKREIESMFYTSSSLVASFTKPE
GAPLEAGALTVDVEAARQAFDQMLAVPWIKQTVNLQVLTELLVASRRNLKSPEILLIFLT
CPLVQEDSNVMNVILPLAVVIEDLSEKTLETLKSSWSSLSATILIRHIMAFKNALAFILK
NGLLQTHNPGAKLLLKVLKLLYKANKSGKSFKVPLSTFYLEEIIVSGAINVFVDVALWLS
LSKVEDNEKTPVIFCRYPFVFPLICKVSVFNILAHVMKESHHVVHEMGISWTKEFLGNSL
DSPVPVLQLNLRRTHLLEDTFRHLAAADHATFKRELVVQFVDDRKIMNVNKKDFFLHVFD
ELMAPESQMFMYNESQTLAWFPPKLQVEERKYFLFGVLCGLALYNHNIVHLPFPLALFKK
LLRVKTSLDDMKEFDPVMAESWRCMLEDYTPDEVEALETTFTVSWGGEKAELDENKPGKP
VTGSNRKEFVAAFVDHAFNKSVEGVFKLFKEGFFKVCNMDVVEFFQPEELQAVMVGQENY
DWEVFKENTIYEGEYHADHPTIITFWKVFENLSAEEKKKFLLFLTGCDRVPFFGMENIRM
RVAMLLHATEIHLPESLTCDNLLLLPNYRRYPVERTMEARLLQAINHNRGFWKK
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgttttgttggggagacagctcgagtggacagtttggggtccaagcagccctg
agcccggtgtcctggaccgggcccggaaccgtaaccgacatctgctgcggagagcagcac
accttattcctcagagccgacggcaaagttttatcatgtggacacaactcgcagggccga
cttggtcgaaggaaccaaagtggaaagatgcttgggtctgtggagggactcggtgatgtt
gtcgccatggcttgtggtcaggaccattgtctggctgtatgttcttctggacaagtgttt
tcttggggggcaggagaagatgggcagcttgggcttgcacaaaggcaccccagcaacaac
cttagacccagccgagtgcccatcccattgcccatacaggtaatccaagtggcttgtgga
aactcccattcccttgcattgaccaaaggaggagatgtcttctcctggggtttaaacagt
catgggcagctgggcctggggaaggacgtgacactgcagaacagacccgacctggtgtac
gccttgaccggagttgcagtaacccaggttgcagccggaggaagccacacactgttcctc
acgctctccggcctgacgtactgctgtggggccaataaatctggccagctggggctcaac
agggtggatgaaaaaggcaggttcaacgtctgcgtggtacctgctctcagacctctgggc
gtctcttccatcagctgtggcgaatcgcacactgctgtgttgacaaaggatgggaaagtt
ttcactttcggagatgggagccacggtcagctcggtcacaactccaccaccactgaggtt
cggcccaggctggttgatggtctcggagagacggcatcccaggttgcatgtgggagacgt
cacactctcgtgttgacttcttctggacgtctgtttgcttttggtaatggggacaaaggc
cagctgggaacaggacagcgagacagcagctcgtccccctccgtagttcagcttccatgg
gcctcagacagagctgctgccacacctagtgacttgaagttatcagctggatgggacaca
aacttcatttacacttcacctgcaaagaccttcaacaatggacaaccaattgggcggctg
gacgagacaaaactacagaagtgggtggcaaagaagtgcagcaatatcgaggccaaaaga
gaaatcgagtccatgttttacacaagttcaagtcttgttgcaagtttcacaaaacccgaa
ggggctccactggaagctggtgctctaactgtggacgtggaggctgctcgtcaagccttc
gaccagatgttggcagtcccatggatcaagcaaacagtaaatctgcaggtcctgactgaa
ttgctcgttgcctcaagacgtaatttaaagtcaccagagattctcctgatttttctgaca
tgtccgctggtacaagaagactcaaacgtcatgaatgtgattttgcctctggctgtcgtt
attgaggatctcagtgagaagactctggaaactttgaaaagctcttggtcgtctttgtcg
gccaccattttgatcaggcacatcatggccttcaaaaacgccctggctttcattctgaag
aacggcctgttgcaaacccacaacccaggagccaaactgctgctgaaagtcctgaagctc
ctttacaaagcgaacaaatctgggaagtctttcaaagtcccactgagcaccttttacctg
gaggaaatcattgtttcgggagctattaatgtatttgtggacgttgctctttggttgtcg
ctttccaaagtagaggacaacgagaaaacacccgtcattttctgccgctaccctttcgtt
ttccctctgatttgtaaagtttctgtcttcaacatcttggcacatgtgatgaaggaatct
catcatgttgttcatgaaatgggtatatcatggactaaggagtttcttggaaacagcctg
gactcccctgtcccggtcctgcagctgaacctgagacgaactcacctgctggaggacacc
ttcagacatcttgctgcagccgatcacgctacattcaaaagagagcttgtggtacagttt
gtagatgacaggaagatcatgaacgtcaacaagaaagactttttcctccatgtgtttgat
gagctcatggctcctgaatctcaaatgtttatgtacaacgagagtcagactctggcttgg
ttcccacccaagcttcaagtggaggaaaggaagtacttcctgtttggcgttctgtgtggc
ctggctctttacaaccacaacatcgttcacctgccgttcccgctggcgctcttcaagaag
ctgctcagagtcaaaacgtccctggacgacatgaaggagtttgatcctgtcatggcagag
tcatggaggtgcatgctggaggattacacccccgatgaagtcgaagccctggagacgact
ttcactgtctcctggggtggtgagaaagctgaacttgatgaaaacaaacccggaaaacct
gtcactggatctaacaggaaagaatttgtcgctgcctttgtcgaccatgcctttaacaaa
tcagtggagggagtgtttaaactcttcaaggaagggtttttcaaagtgtgcaacatggat
gtcgtggagttcttccagcccgaggaactacaggcagtcatggttggccaggagaactac
gactgggaggtcttcaaggagaacacaatttatgaaggagaatatcatgctgatcatcca
accatcatcaccttttggaaggtgtttgaaaacctctcagcagaagagaagaaaaagttc
ctcctgttcctcacaggctgtgacagagtccccttctttggaatggagaacatcaggatg
agagtggccatgttgttacatgccacagagatccacttgcctgaatccctcacctgcgat
aacttgctgctgctgcccaactacaggcgatacccggttgagaggacgatggaggccagg
ctccttcaggccattaatcacaacagaggcttctggaagaaatag
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