Poeciliopsis prolifica (blackstripe livebearer): 129359279
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Entry
129359279 CDS
T09758
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129359279 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129359279 (trip12)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129359279 (trip12)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
HECT type E3
129359279 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
129359279
NCBI-ProteinID:
XP_054884779
LinkDB
All DBs
Position
Unknown
AA seq
2062 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTAAGRLQSEQVKHKPNSPPESRRPNSKAPKAT
ASSATGQSRGHSSRRSGLNLSVGSLVLQDDSQAAGTSEQERPGHQSKSEGTRGLKRSDAP
DQISVLGPTPSKKPKSVPPPKSNTSETKKGPAKSKKRQSSSEAPASTGRNQSKKSVASSA
SPVQKRKKSDSFPGLSSTAGSLPNCTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSASS
SSSSSTTGTNSAATQGARLKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFDWA
TRFNPKVNLPKPKLSLPGTSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSSRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFE
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQARGLAHCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVDDSLSLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMLS
LMCSNCPSLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVSRSPQELYELTSLICELMP
CLPREGIFAVDAMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLSESESFLVTSPPKACS
SGTASLCTTTITSVSTTSANIATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKADNQVFFAAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPS
RTAGVSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCT
ATEQLNLQVDGGLECLVEISNIVSESDVSSFEIQHSGLVKQLLIYLTSNMDRDLLSREVR
LKRFLNIFAGCPLPGVDPIGRLDPTNNSAYLALVHKMNSCLSQMEQFPVKVHDFPSGNGN
GSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRI
REEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQA
EEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEEGSKDSVGGKRGRAQTAPTKTSPRN
AKKQDELWHDGVCPSVANPLETYLTTEPPETITFDDPSLEVTLLLRILHSISRFWFYLYD
NAACKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQML
FYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREDLLKQAESVMQDLG
SSRAMLEIQYENEVGTGLGPTQEFYALVSQELQRADLGLWRGEEITLANPKGNQEGTKYM
FNSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHE
TSISSHDLMNIDPSVAKSIQHLEDINRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDL
GLDFTLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFDSFREGFESVFP
LHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAIRFLFEVLSSFDAEQ
QRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSS
IEIMREKLLIAAREGQQSFHLS
NT seq
6189 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagcagctggaaggttgcagtcagagcaggtaaaa
cataaaccaaattccccacctgaaagtagaagacctaattctaaggctcccaaagccact
gccagctcagccactggccagtccagagggcacagctcaagaagaagcggtcttaaccta
tcagtgggttcattagtgctgcaagacgactcacaggctgccggaacatccgaacaggaa
cgaccaggccaccagtcaaagagtgagggcaccagagggcttaaacgaagtgacgctcct
gaccaaattagcgtccttggacccaccccttccaagaagcccaaatcagtcccaccaccc
aaaagtaatacctcagagaccaagaaaggcccagctaagtccaagaagagacagtcttct
tcagaggcacctgcatccacaggtcgaaatcaaagcaagaagagtgtggccagctcggcc
tctccagtccagaaacggaaaaaatcagactctttcccaggtctaagtagcaccgctggg
tctctacccaattgtactgaaggcagaactgcaaaaccaaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacagactcgtcctcctctgcctcctcc
tcttcttcttcctctaccacaggcaccaacagtgctgctacgcagggcgctcgtttaaag
cagggaaaagatcagacaaaagctcgtcgttccagatcagcatctagtccctctccgcgt
cgcagtacacgagacaaggagcaggccaaaaccgccagctcttcaaagtttgactgggca
acacgtttcaaccccaaagtaaacctgccaaaacccaaactttccttacctggaacttcc
aaaactgagacctccaaacctgggccatctggactacaagctaaactcgcaagtttgagg
aaatccacaaagaagcgcagcgagtctcctccagcagagctccccagttctcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgctcgccgacaggagaaaatggctgactccgacaacaaccaa
gatggggccaattcatcagctgctcgcactgatgaggcgtcacaaggagcttcagcttca
agctcagttgccggagcagtgggtatgaccacttctggagagagtgagtctgatgattca
gaaatgggaaggcttcaagcgcttctggaagccagaggtctcccaccacatctttttgga
cccctcgggcctcgcatgtcgcagctgtttcacaggaccataggcagtggagccagttcc
aaggcccagcagctgctgcagggcctgcaggccacaggggacgagtctcaacagcttcaa
gctgccattgagatgtgccagctgctggtgatgggcaatgaggaaacgcttggtggattt
cctgtcaagagtgtggtgcctgctttgattacactgttacagatggagcataattttgaa
attatgaatcatgcatcgcgtgcgctcacttacatgatggaggcacttcctcgttcttct
gctgtcgtggttgatgctattcctgtcttcctggagaaacttcaggtgatccagttcata
gacgtagcagaacaagccctcacagccttggaaatgttgtcaaggcgacacagcaaagca
attttacaagctaggggcctggctcactgcctcctctacctggagttcttcagcatcaat
gcccagaggaatgcgttggccatagcagcgaactgctgccagagcattactccagacgag
tttcactttgttgatgattcgctctcactgttgactcagagacttacacatcaggataag
aagtccgttgaaagcacttgtctctgtttcgccagactggtggacaactttcaacacgaa
gagaacctgctgcagcaggtggcatcgagggacctgttgaccaacatccagcagttgcta
gttgtgacgcctcccgtccttagctcggggatgtttattatggttgtgcgcatgctctcg
ctgatgtgctccaactgcccaagtctggcagtccagcttatgaaacaaaacatagcagaa
actctgcgtttcctcttgtgcggtgcatcaaatggaagctgccaggaacaaattgagctc
gtatctcgaagcccgcaggaactctatgaactgacctccctcatttgtgaattgatgccc
tgccttcccagagagggcatctttgcagttgatgctatgctgaagaaaggcagtgctcaa
acaacagaaggtgcaatctggcagtggagggatgacaggggcttgtggcatccttacaac
cgcatcgacagccgcatcattgagacggcccaccagaacggagaagatgagatcagcttg
tcaacgctgggccgtgtatacacaattgacttcaactctatgcagcagataaatgaagac
acaggaacagcacgcggtatccagaggaagcctaatcctcttgccaatcctaacacaggg
agtcaccaagaggttcgtcgggaagatgcaagagcccagctgatgaaggaggaccctgag
ctggcgaagtgctttattaaaacactgtttggggtcttgtatgaggtttacagctcatca
gctggccctgctgtccgacacaagtgccttagagccatcctcaggatcatctacttcgct
gacgccgagctgctgaaggatgtgctgaggaaccatgctgtgtccagtcacattgcctcc
atgctgtccagccaggacctgaagattgtggttggatctctgcagatggcagagatcctc
atgcagaagctgcctgatgtcttcagtgtctattttagaagagaaggtgtaatgcatcaa
gtaaagaacctttcagagtctgagagctttcttgtcactagtcccccaaaggcctgctcc
agtggtactgccagcctctgtaccacaacaatcaccagtgtatccacgacatcggctaac
attgcaactcctgacctgggttcccccagctttcagcacagcatggacgactcgctggac
ctcagtccccaagggcggttaagtgatgtcctaaagagaaaacgccttccaaaaagagga
cccagaaggcctaagtactctccgccaagagacgatgataaagcagacaatcaggtcttc
tttgcagccaagagccccaccagtactcagtcacccaagtcgtcattcttggccagcctc
aaccccaagacctgggggaagctgggagctcaaactaataatgccaactctgagccatca
cgcacagcaggagtaagcggcctggcaagagcgcctcccaaagactctatttcaaataac
agagataaaattaaggcctggattaaagagcaggcaagtaagtttgtggagcgctacttc
aactctgagaatgtggacggcagcaaccccgctctgaatgttctccagagactttgcacg
gccactgagcagctgaacctgcaggtggatggtgggttggagtgcctggtggaaatctcc
aacattgtgtcagaatctgacgtgtcatcgtttgagatccagcacagcggtctggtgaag
cagcttctgatctaccttacctccaacatggacagagacctgctcagtcgtgaagtgcgg
ctcaagaggttcctcaacatcttcgctggttgtccgttgccaggcgttgatcctataggt
cgtctggatcccacaaataattcggcatacctagcactcgtacacaagatgaacagctgt
ctgagccaaatggagcagttcccagtcaaggtgcacgactttcccagtggcaatggcaac
ggcagcaggggatctcaggcactgaagttcttcaacacacatcagctcaagtgtcagctg
caaaggcacccagactgcactaatgttaaacagtggaaaggcggtcctgtgaagattgac
ccgctggcactggtgcaagcgatcgagagatatcttgtggtcagaggctatggtagaatc
agggaagaagatgaggacagcgacgatgacggttcagatgatgaaatcgacgaatcattg
gcggcacagttcctaaattctggcagcgtgcgtcacagactacagttctacattggtgac
cacctgctgccatacaacatgacggtgtaccaggctgttcgacaatacagtcttcaggca
gaagaagagcgggagtcgacagatgacgaagcaaatccactggggagggctggaatctgg
accaaaacgcacacaatatggtataagcctgtgagagaagacgaggaaggcagtaaggac
tcggttggtggaaagcgaggtagagcccagactgctcccactaaaacctcaccgcgcaac
gccaagaaacaggatgagctgtggcatgatggcgtatgtcccagcgttgccaatcctttg
gaaacatacctcactacggagccaccagagaccataacctttgacgacccctctttagag
gtcaccctgctgctgaggatccttcactccatcagtcgattctggttctatttgtacgat
aatgctgcgtgtaaggaaattattccaacctctgagttcattaatagtaaactgactgcc
aaagccaatcgtcagctacaagatccactggtcatcatgacggggaacatccccacctgg
cttatcgagctgggaaagacctgcccgttcttcttccccttcgacactcggcagatgttg
ttttatgtaaccgccttcgatcgagacagagccatgcagcgcctgctggacacgaaccct
gagatcaaccaatcagattctcaggacagcagagtcgcaccacgtctggataggaaaaag
agaacgataaaccgtgaggatctattaaaacaggcagagtctgtgatgcaggaccttggc
agctccagggcaatgctggagattcagtatgagaatgaggtgggcacgggtctcggtccc
acgcaggagttctacgctctggtgtctcaggagcttcagagagcggatcttggtctttgg
agaggcgaagagattactctggccaatcctaaaggaaaccaagagggcaccaagtacatg
ttcaactccagagggctgtttgctgttccctttggcagaacgacaaaaccagcacacata
gccaaaattaaaatgaagttccgtttcttaggaaagttgatggccaaagcaattatggac
tttagactgctggatctgccgttggggcttccgttttataagtggatgctgcgacacgag
acgtctataagctctcacgacttgatgaacattgacccaagtgtggccaagtccatccag
cacctagaggatatcaatcgtcagaagaagaggttggaacaggaccgatcacagaccaga
gaaaccctccagcaggccctcgagagcctgaacatgaacggctgctcggtggaggacctg
ggcttggacttcactctgcctggcttcccaaacattgaactgaaaaagggtggaaaagac
gtgccagtcacaatctacaacctcgaggagtacctcaggttggtggtgtactggacctta
aatgaaggagtatcaagacaatttgactcattcagggaagggtttgagtcagtcttccct
ttgcatcacctgcagtatttctaccctgaagagctggaccagttgctgtgtggcagtaaa
tcagagacatgggatgtgaagacactgatggagtgctgtcgaccggaccacggctacacg
catgacagccgggccatccggttcctgttcgaggtgttgagcagcttcgatgccgaacag
cagcggctctttctccagtttgttactggaagcccgaggctgcctgtcggaggtttccgg
agcctcaacccccctctgacaattgtgaggaagacattcgagtcgacggagaaccccgac
gacttcctgccctcagtcatgacctgcgtcaactacctgaagctgcctgactactccagc
atagagatcatgcgagaaaaactgttgattgctgctcgcgagggccagcagtcgttccac
ctttcctga
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integrated database retrieval system
