Poeciliopsis prolifica (blackstripe livebearer): 129359285
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Entry
129359285 CDS
T09758
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129359285 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129359285 (prpf8)
Spliceosome [BR:
pprl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129359285 (prpf8)
Complex C
U5 SnRNP specific factors
129359285 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
129359285
NCBI-ProteinID:
XP_054884793
LinkDB
All DBs
Position
Unknown
AA seq
2358 aa
AA seq
DB search
MAAAFPYRGVPPGMPPGVPPGVPPVVPPGVPPGVPPVVPPPAPVPDYMSEEKLQEKARKW
QQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPH
AVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRD
RRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQMELDSEEDSSVVEWFYEHQPLKDNP
KFVNGTTYRRWQFTLPMMSTLYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGP
KFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNV
VFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKETPLYTDN
TANGIALLWAPRPFNLRSGRTRRAIDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLN
ALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLH
LDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADG
LQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLVYYRFNTGPVGKGPGCGFWSPGWRVW
LFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMM
PEGIKQNKARTILQHLSESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYN
RERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWL
ESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEA
LSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFP
PWIKPADTEPPPLLVYKWCQGINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLL
RLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHR
ASEMAGPPQMPNDFLSFQDTSTESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEH
PDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSV
YSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESM
QRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQT
RIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGM
SHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIP
RINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQA
LGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLW
WSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVF
DQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTT
QKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGN
WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQII
WFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLA
KWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACL
KVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPD
KTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEIS
APSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRA
ISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNP
QVKEIRCIVMVPQWGTHQTVHLPNQLPSHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHA
KIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYE
RVQMLLSDRFLGFFMVPGQVSWNYNFMGVRHDPNMKYDLQLSNPKEFYHEVHRPSHFLNF
ASLQEGEIYNADREDMFG
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcctttccctacagaggagtccctccagggatgccaccaggtgtccctcca
ggagtacctccggttgtcccccctggtgttccaccaggcgtaccccccgttgttccccct
ccagcgcctgttccagattacatgtctgaggaaaaactccaggaaaaagcaaggaaatgg
cagcagctgcaggccaaacgctatgcggagaaaagaaagtttggctttgtggatgctcag
aaggaagatatgcctcctgagcacgtccgcaagatcataagggaccatggagacatgacc
aatagaaagtttcgccatgacaaaagagtctacctaggcgctctcaagtacatgcctcac
gcagtgctgaagcttctggaaaacatgccgatgccctgggagcagatcagagacgtccct
gtgctctaccacatcaccggagccatttcctttgtgaatgaaatcccttgggtcatagag
cctgtctacattgcccagtgggggaccatgtggatcatgatgcgtcgtgagaagcgtgac
cgacgacacttcaagaggatgcgctttccgccatttgatgatgaagagccaccgctggac
tacgcagacaacatcctggatgtggaacctctggaggccattcagatggagctcgattct
gaggaagattcttcagtcgtggagtggttctatgagcaccagcccctcaaagataatccc
aagtttgtgaatggcaccacctaccgtcgttggcagttcactctccccatgatgtcaaca
ctgtatcgcttggccaatcagcttctaacagatttagtggactttaattacttttatctg
tttgacctgaaggccttcttcacttcaaaagctttgaacatggccatcccaggaggtcca
aagtttgagccacttgtcagagacattaatcttcaggacgaagactggaacgagttcaac
gacatcaacaaaatcatcattcggcagcccatcaggaccgagtacaagattgctttcccc
tacttgtacaacaacctgccgcaccatgtgcaccttacctggtaccacacacctaatgtg
gtatttatcaagactgaggacccagatcttccagcgttctactttgatccgttgatcaac
cccatttctcacagacattcagtcaagagccaggagcctctccctgatgatgatgaggag
tttgagcttccagaatttgtggagccgttcctgaaagagacgccgctctacactgacaac
acagccaatggcatcgctctgctttgggcccccagacctttcaacctgcgttctggccgc
acaagacgcgccatcgatatccccctggtcaaaaactggtaccgagaacattgtcctgca
ggacagccggtgaaagtacgtgtgtcgtaccagaaactgctgaagtactatgtactcaac
gctctcaaacacagaccccccaaagctcagaagaagaggtacctgttccgctcctttaag
gcgacaaagttcttccagtccaccaagctggactgggtggaggtgggattgcaggtctgc
aggcagggttacaacatgctcaatctgctcattcatcgcaagaacctcaactacctgcat
ctggactacaacttcaacctgaagccggtcaagacgctcaccacaaaggagagaaagaag
tccaggttcggcaacgccttccatctgtgcagagaggtgctacgtctgagcaagctggtg
gtggacagccatgtgcagtacagactgggaaatgttgatgcctttcagctggctgacggt
ctgcagtacatctttgcacacgtgggacagctgacgggcatgtaccgctacaagtacaag
ctgatgagacaaatccgcatgtgcaaagacctgaagcatctcgtctactaccgctttaac
actggtcctgtgggcaaagggccaggctgtggcttctggtctcctggctggagagtgtgg
ctcttcttcatgcgggggatcactccactgctggagaggtggctcgggaacctgctggcc
aggcagttcgaaggacgtcattccaagggcgtggccaagactgtgaccaaacagcgcgtg
gagtcgcactttgacctggagctgcgggctgcagtgatgcacgatatcctggatatgatg
cctgaaggcatcaaacagaacaaggccagaaccatcctgcagcacctcagtgagtcctgg
aggtgctggaaggccaacatcccgtggaaggtccctggtctcccaactcccattgagaac
atgatcctgcgatacgtgaaggccaaagctgactggtggaccaacaccgctcactacaac
agagagcgaattcgccgtggagccactgtggacaaaacagtgtgcaagaagaacctgggc
cggctgacccgtctgtacctgaaggctgagcaagagagacagcacaactatctgaaggac
ggaccttacatcactgcagaagaggctgtggccatttacacaaccactgtgcactggctg
gagagtcggcgcttctctcccatacctttccccccgctttcctacaaacacgacaccaag
ctgctgatcctggctctggagaggctcaaagaggcatacagtgtgaaatctcgtttgaat
caaagtcagagggaggaactggggctgatagagcaggcctacgacaacccgcacgaggcg
ctctccagaatcaaacgtcacctgctcacacagagagctttcaaagaggttggtatcgag
ttcatggacttgtacagccacctggtgcctgtgtacgatgtggagcccttggagaagatc
acagatgcgtatctggaccagtacttgtggtatgaggcagacaagaggcgacttttccct
ccctggatcaaaccagctgacactgaacctccaccgcttctggtctacaagtggtgccaa
ggcatcaacaacttgcaggacgtgtgggaaacagctgagggcgagtgcaacgtgatgctg
gagtctcgctacgagaaaatgtacgagaagatcgatctgactttgctcaacaggctgctg
cgtcttattgttgaccacaacattgctgattacatgacggccaagaacaacgtggtgata
aactacaaggacatgaaccacaccaactcttatggcatcatcaggggactccagtttgcc
tcgttcattgttcagtactacggtcttgtgatggacctgctggtgctcggtttgcaccgt
gccagcgagatggccggcccaccccagatgccaaacgacttcctgagtttccaggacacc
agcaccgaatcagcacatcccatcaggctgtactgtcgttacatcgaccgcattcacatc
ttcttcagattttctgctgatgaggccagagacctgattcagcggtacctgacggagcac
ccggaccccaacaacgagaacatcgttggatacaacaacaagaagtgctggcctcgtgac
gcccgcatgagactgatgaagcacgacgttaacctcggccgagcagtcttctgggacatc
aagaaccgtctgccgaggtctgtgaccacagtccagtgggagaacagctttgtgtcggtc
tacagcaaagacaaccccaacctgttgttcaacatgtgtggcttcgagtgccgcatcctt
ccaaagtgccgcaccagctatgaggagttcactcacaaagatggcgtctggaacctgcag
aatgaggtcactaaagaaaggacggcccagtgtttcctgcgtgtggatgatgaatccatg
caacgcttccacaacagagtgcgccagattctcatggcttctggatccaccactttcacc
aagatcgtgaacaaatggaacacggctctgatcggcctgatgacctacttccgtgaggct
gtggtcaacacacaggagctgctggaccttctagtgaaatgcgagaacaagatccagacc
cgtatcaagatcgggctgaactctaaaatgcctagtcgtttccctccagttgtcttttac
actcctaaagagctgggcggtcttggcatgttgtccatgggtcacgttctcatcccacag
tcagacttgcggtggtccaagcagacagacgtggggatcacccacttcaggtctggaatg
agtcatgaagaagatcagctcattcctaacttgtaccgctacattcagccatgggagagc
gagttcatcgactcccagagagtctgggccgagtacgccctcaagagacaggaggccatt
gcccaaaacaggcgtctcactctggaggatttggaggactcgtgggacagaggaatacct
cggatcaacacacttttccagaaggacagacacactctggcctatgacaaaggctggaga
gtcaggacagacttcaaacagtatcaggtgctgaagcagaatcctttctggtggacccac
cagaggcacgacggtaagctgtggaacctgaacaactaccgcacagacatgatccaagct
ctaggcggcgtggagggcatcctggagcacacactcttcaaaggcacttacttccccacc
tgggagggtctcttctgggagaaggccagcggctttgaagagtcgatgaaatggaagaag
ctgacgaacgcccagaggtctggtctgaaccaaatcccgaatcgtcgcttcactctgtgg
tggtcccccaccatcaacagagccaacgtgtacgtgggtttccaagtacagcttgacttg
acaggaatctttatgcacggcaagatccccacgctgaagatctccctcattcagatcttc
agggctcacttatggcagaagattcacgagagcatcgtcatggatctctgtcaggttttt
gaccaggagctcgatgctctggagatcgaaactgtgcagaaggagaccatccatcccagg
aagtcctacaagatgaattcgtcctgtgcagacatcctcctgtttgcgtcttacaagtgg
aacgtgtcccgtccgtctctgctcgctgactcaaaagatgtgatggacagcaccaccaca
cagaagtactggattgacattcagctcagatggggcgactacgactcgcacgacattgag
cgctacgcgagagccaagttcctggactacaccacagacaacatgagcatctacccctcc
cccactggagtgctcattgccattgacctggcttacaacctgcacagtgcctatggtaac
tggttccctggtagcaagcctctgatccagcaggctatggccaagatcatgaaggccaac
ccggctctgtatgtgctcagagagcgcatccgcaaaggtctgcagctgtactcctcagag
cccaccgaaccgtacctgtcctctcagaactacggagaactcttctccaaccagatcatc
tggtttgtggacgacacgaacgtgtacagagtcactatccacaagacttttgaaggaaac
ttgaccacaaagcccatcaatggagccattttcatcttcaaccccaggacagggcaactg
ttcctcaagatcatccacacatctgtgtgggctggacagaaacgtctgggacagctggcc
aaatggaaaacagctgaagaagttgctgccctgatccgctctctccctgtggaggagcag
ccaaaacagatcattgtgaccaggaagggcatgttggaccctctggaggtccacttgctc
gacttccccaacatcgtgatcaagggctcagagttacagctgcccttccaggcttgtctg
aaggtggaaaagtttggagacctgatcctgaaggccacagagccacagatggtgctgttc
aacctctacgatgattggctgaagaccatctcgtcttacactgccttctcccgtctcatc
ctgatcctaagagcgctccacgtcaacaacgaccgcgccaaggtgatcctgaaacctgat
aaaaccacaatcactgagccccatcacatctggcccacactcacggatgaggagtggatc
aaggtggaagttcaacttaaagatctcattcttgccgattatggcaagaagaacaacgtg
aacgtcgcctccctgactcagtctgagatccgtgacatcatcctgggtatggagatctca
gctccgtctcagcagcgtcagcagatcgccgagatcgaaaaacagaccaaagagcagtcg
cagctcaccgccacacagacccgcaccgtcaacaaacatggagatgagatcatcacctcc
accacctctaactacgagacgcagaccttctcttccaagactgagtggagagtcagggcc
atatctgctgccaacctccatctccgaaccaaccacatctatgtgtcctctgatgacatc
aaggagacgggttacacctacatcctgcccaagaacgttctcaagaagttcatttgcatt
tcagatctgcgggctcagattgcaggctacctgtatggcaccagcccacctgacaacccc
caggtaaaggagatccgttgtatcgtcatggtacctcagtgggggacacaccagactgtc
cacctccccaaccagctgccgtctcacgaatatctcaaggaaatggagcctcttggctgg
atccacactcagccgaacgagtccccacagctgtccccacaggacgttacaacccacgct
aagatcatggctgataacccgtcatgggatggagaaaagaccatcataatcacttgcagc
ttcacgcctggttcatgtacactcacagcctacaagctgacccccagcggctatgagtgg
ggtcgccagaacaccgataaaggcaacaacccaaaaggctaccttccatcccactatgaa
agagtccaaatgctgctctctgatcgcttcctgggctttttcatggttcccggccaagtc
tcctggaattacaacttcatgggtgtgcgccacgatcccaacatgaagtacgacctgcag
ttgtccaaccccaaagagttctaccatgaagtccatcggccttcgcacttcctgaacttc
gcctcgctgcaggagggcgagatttacaacgctgacagagaggacatgttcggctga
DBGET
integrated database retrieval system
