Poeciliopsis prolifica (blackstripe livebearer): 129359383
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Entry
129359383 CDS
T09758
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129359383 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprl04812
]
129359383 (tubgcp6)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
129359383 (tubgcp6)
Cytoskeleton proteins [BR:
pprl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
129359383 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
129359383
NCBI-ProteinID:
XP_054884947
LinkDB
All DBs
Position
Unknown
AA seq
1847 aa
AA seq
DB search
MYSSSNNPSKANSSSSSITELLSALCDCSLSGVSWKRRALGGVSREGFHRALKKRAYGAL
LSKLFQDGTKGSASRPSAAARTPPRNKVLMMCFDLRVAGCREEAEALEDLLGRLREGASS
GLKEVDSVLELLVCLAGSAPPPPTSFSRDYMRRERAVLRRPQPWSYQSEELQRLEARAWG
LMCAEEWGTLETLCGTQRLMDSLPRTGLLALRMKMEAEERFEKETRMSLFGALQHTRTSD
LDIRLDLPPIPSNIDVTGLAIRVPHYLDQSEDEGFQSASNLTPDSQSEASPVPDVDIWEA
VRTFEPKRRRCWESVGCPPGKRESFYLTEGGRETFDQLYRLWEGEMRVVSSGDSTPILML
PLDSQTQLVSDLLNVLIGVASTTFPLNQSVQFDVRPSVCVSGASPESVSRLLGELAQYGT
HYLRLSRFSLQSADKKGLVFQAFTGGLRKYLHYFRACVLSTPPTLSLLTIGFLFRKVGRQ
LRYLSELCCVDGPSGSGQAAFPVGVKLLSYLYNEAQSNCSNENYPILLSLLKSCCEPYTR
FVSDWVYSGDFRDVCGEFMIQVNEDYLGFRDKHFWVQGYTLISKDVEDCVPVFLRHFAND
VYVCGKTINLLRICCPQHYICWSELPVPRIAVTFSLQEVEEIERECAVYRGRMERIAKHS
AVSREEQALRAERARQELINQVRESAAKTLESIRGRQVSQRLAEEAKKRERFEELKQHLE
QEQEWRNAAKKKQEDDDFGFARELRDREKRLQALEEQLEQRARKELIAQYSRLSEEAARR
ERRAMWRVQRMRLHEAREQFFTLDRQKIQVLLDKYPLGQQSPPVAALPSGPSLTPQQTHE
FSTQEEQLADIRTSEAAFLPLNPSAADPPPISEDFDISDLLTKSLKPDSQQVDNALEEIG
SDLPDARPALQLIDYDFSAPFSPLEGIAGQSSSQSRPRWGPAVHPELTQLSEDSSSGTDQ
GQTEAVPEQEASDEQKKDQTITAGVEADTKDQDSESGDTPGGGVPLPDPQRSLSIANIKV
PDRSSHGHSSDAHIKVGQNVSKVTAHIPSPNIHGHASDSHIKVGEHVSEVGAPTPSSGAH
GHSSDAHIKIGKYVPECVPPLPVRNIHGHVSHAHIKVGEHVSEIDAPLPSPGVHGHSSDA
HIKIGENVSDIVTPQSARNIHGHSSDAHIKVGENVSDFVAPQPARNIHGHSSDAHIKVGE
NVSDVVAPQPAPSVHGHSSDANIRVGEFVSNVAEGRPRWSKHGHTSDCVLQPGCVVSGEE
PPSAPLPGSSYGHSSDSALGIGCVVQGEEPKRAALPGSAHGHSSDSALGIGCVVSKADPL
PSPLPGSAYGHSSDSTLGIGCVVQGSEPPPAALPGSAYGHSSDSTLGIGCVVQGSEPPPT
ALPGSAYGHSSDSTLGVGCVVKGKDKNLQKTKDEEDKVSPSGSPTDDRMVCWTTGLWLSP
GEKTQQEYLMALSAQYQVEHYEDCYNLLASSPESQLLKQVTRGPWGLPMDPTLRKATDTT
AVQLSEMVSLPVLIKHSVTAPLITHVSLVNKAIVDYFFVELGVERHFEALRHFLLMEDGE
FAQSLSDLIFEKMASGQTPGELLTPLVLNSILSKALQYSLHGDTPLAPNFTFALRFLPET
FHPHAPDSLNCLELRYKVDWPLNIIITDSCMNKYNRLFSFLLQLKHMVWSLRDVWFHLKR
TALVKGAGRSVQFRQLQLYRHEMQHFVKVIQGYIANQILQVSWTEFTAKLATAGDLDGIH
RTHADYLNRAIFRGLLTEKAAPVMNIIHSIFSLILKFRAQLIAQPWDSQQGEAVHPSFIA
MQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYKDS
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgagttcaaacaatccctcaaaggccaactccagcagcagcagcatcacagag
ctcctgagcgccctgtgtgactgcagcctctctggggtctcttggaagcgtcgggccctc
ggaggcgtttccagagagggcttccaccgagcccttaaaaagcgggcctacggcgctttg
ctgtctaagctttttcaagatggcaccaaagggtctgcctcaagacccagtgccgcggcc
agaaccccacccaggaacaaagtcctgatgatgtgctttgacttgcgagtggccggctgc
cgggaagaagcagaggccctggaggatctactggggcggctgcgtgaaggagcgtcctcc
gggctgaaagaagtagactccgtcctggagctcctagtgtgcctcgccggctccgcgccg
ccgcctcccacctctttcagcagggactacatgagacgagagagggctgtgctacggagg
ccgcaaccctggagctaccagagcgaggagctgcagcggctggaggccagggcgtggggt
ctgatgtgcgcggaggagtgggggactctggagactctgtgtggaactcagaggctgatg
gactccctgccaaggacagggttgctggctttgaggatgaaaatggaagcagaagagaga
tttgagaaggagacgaggatgtcgttgtttggagcgctgcagcacactcgaacatcagat
ttggacatcagactggacctcccgcctattcccagtaatattgatgtcactggactggct
atcagggttcctcactacttggatcaatctgaggacgagggcttccagtcagcctccaac
ctgaccccagactctcagtcagaggcgagccccgttccagatgttgacatctgggaggct
gtccgcacatttgagcccaaaagacgccgctgctgggagtctgttggctgtccaccagga
aaaagggagtccttctatctgactgagggaggcagagagacgtttgaccagctctatcgg
ctgtgggagggagagatgagggtcgtgagctccggcgactccactcctatcctcatgctg
cccctggactcccagacgcaattagtctccgacctcctgaacgttctgataggagtggcg
tccaccaccttccctctcaaccagagcgttcagtttgacgtcaggcctagcgtgtgcgtg
tcgggagcttctccagagagcgtgtctcgtcttctgggggagttggcccagtatggcacc
cactacctgaggctgagtcgcttttctctccagagtgctgacaagaagggcctagtcttc
caggcgttcaccggtggtctgaggaagtatctgcattacttcagagcttgcgttctcagc
actccccccactctcagcctgttgaccatcggcttcctcttccgcaaagtgggccgccag
ctcaggtacctgtcggagctgtgctgtgtggacggaccgtcgggctcaggccaggccgcc
ttccctgtgggtgttaagctgctgtcctacctctacaatgaagcccagagtaactgcagc
aacgagaactatcccatcctgctgtccttgttgaagagctgctgtgaaccttacacacgg
tttgtgtccgactgggtgtacagcggcgattttcgagacgtttgtggagaattcatgatc
caggtcaacgaggattacctcggtttcagggacaaacacttctgggttcaaggctacact
ctgatctcgaaagatgtggaggactgtgtgccagtcttcctgagacactttgccaacgac
gtctatgtctgtgggaagactataaaccttctccgaatctgctgtccacagcactacatc
tgctggtcggagctgccggtgcctcgcatcgccgtcaccttctccctgcaggaggtggag
gagattgagcgggaatgcgcggtgtatcgcggccgcatggagaggatcgccaaacacagc
gccgtcagcagggaggagcaggccctgcgagcagagcgagcgcgccaggagctgatcaat
caggtcagggagtcggcggctaaaaccctggagagtatccgagggcgccaggtgtcacag
cgtctagctgaggaggccaagaaaagggaacgctttgaggagctgaagcagcacctggaa
caggagcaggagtggcgaaatgcagccaagaagaagcaggaggacgacgactttggcttt
gccagagagctgagagacagagaaaagagactgcaagccctggaggagcagctggagcag
agagccagaaaggagctgattgctcagtacagccgtctgtcggaggaagcggctcgcaga
gagagacgggccatgtggagagtgcagcgaatgagactccacgaagccagggaacagttc
ttcacgctcgacaggcagaaaattcaggtattgctggataaataccccttaggccagcag
agccctcccgtggctgcattgccatctggtccttcattaacgccacaacaaactcacgaa
ttttccactcaggaggagcagttagcagacattcgaacatcagaagctgcattcctgcca
cttaatccgtcagcagcagaccctcctcccatctcagaggacttcgacatcagtgacctt
ctcactaaatcgctgaagcctgacagtcagcaagtggataacgccttggaggaaattggc
tctgacctacctgatgcccgtcctgctctccaactcattgactatgattttagtgccccc
tttagcccactcgagggtatcgctggccaatcttcttctcagtccaggcctcggtgggga
cctgcagtccaccctgagttgacgcagctctcggaagattccagctcgggtacagaccag
ggtcagactgaggcagtaccagaacaagaggcaagtgatgagcagaaaaaagatcaaact
attactgcgggagttgaggcagacactaaagaccaagactcagagagtggagatacacct
ggtggaggtgttcctctcccagaccctcagcgttctctctccattgccaacataaaggtt
ccagacagaagctctcatggccattcatctgatgctcacataaaggttggacagaatgtc
tccaaggtaactgctcacatcccctcccccaacattcacggccatgcttcagactcgcac
atcaaggtgggcgaacacgtgtccgaagttggcgctcccacaccgtcctccggtgctcac
ggtcactcctctgacgctcacatcaaaatcgggaaatatgttcctgagtgtgtccctcct
cttcctgtccgtaacatccatggtcatgtctcgcatgcccacatcaaggttggcgaacac
gtttccgaaatagatgcgccgttaccgtcgccaggcgttcacggccacagctctgacgct
catataaagattggggaaaatgtttcagacattgtgacgccgcagtctgcgcgtaatatt
catggccacagctctgacgctcatataaaggtcggggaaaatgtttcagactttgtggcg
ccgcagcctgcgcgtaatattcatggccacagctctgacgctcatataaaggttggggaa
aatgtttcagatgttgtggcgccgcagcctgcacccagtgttcacggacattcctctgac
gccaatataagagtgggggagtttgtgtctaatgtagcagaaggaagacctcgttggagc
aaacacgggcacacctcggattgtgtcctccagccgggttgtgtggtctctggagaagaa
cccccatcagcccctctgcctggcagctcttatggtcactcctcggactcagctttaggt
atcgggtgcgtggtccagggagaggagcccaaacgagcagccttacctggcagcgcacac
ggacattcgtcagactctgctttggggatcggatgcgttgtctcaaaagccgacccactt
ccatcgccactaccaggcagtgcctacggtcactcctctgattcaacgctgggcattggc
tgcgtggtgcaggggtcagagccgccacctgctgcactgccaggcagtgcctacggtcac
tcctctgattcaacactgggcattggctgcgtggtgcaggggtcagagccaccacccact
gcacttccaggcagtgcctacggtcactcatcagactctactttgggggttggatgtgta
gtgaaaggaaaagataagaacctgcaaaagacaaaggatgaggaagacaaagtttctcct
tcaggcagccccacagatgacaggatggtgtgttggacgactggtttgtggttatcccct
ggagagaagacccagcaggaatacctcatggccctgtccgctcagtaccaggtggaacat
tacgaggactgctacaacttactggcttcgtcccccgagtcccagctgctgaagcaggta
acgcgggggccctggggccttcccatggacccaacgctccgcaaagccacagacaccaca
gctgtccagctcagtgagatggtttccctgccggtgctgataaagcactctgtcaccgcc
ccgctcatcacgcatgtctccttggtgaataaggctatagtggactacttctttgtggag
ctaggggtggaaaggcactttgaggcgctgcgccacttcctgctgatggaggatggcgag
ttcgcccagtctctcagcgatctgatctttgaaaagatggccagcggccagactccgggc
gagctgctgaccccgctggtcctaaactccatcctcagtaaggccctgcagtatagcctc
cacggagacactccattagctcctaacttcaccttcgccctgcgcttcctgcccgaaacc
ttccacccccacgcgccagactccctcaactgcttggagctgcgctacaaggtggactgg
ccgttgaacatcatcatcaccgacagctgcatgaacaagtacaaccgcttattttcgttc
ctgctgcagctcaagcacatggtgtggagcctcagggatgtctggtttcacctcaagagg
acagcgctggtgaaaggcgcgggccgctcggtgcagttccgtcagctgcagctctacagg
cacgagatgcagcattttgtcaaagtcatacagggttacatcgccaaccagatcctgcag
gtgtcctggactgagttcacggcgaagctggccactgccggtgacctggacggcatccac
cgcacacacgccgactacctcaacagagccatcttcaggggtttgctgacggagaaagcg
gctccggtcatgaacatcatccacagcattttcagcctgatcctcaaatttcgggctcag
ctcatcgcgcaaccctgggacagccagcagggggaggcagtgcacccgagcttcattgct
atgcagcagtcgtacaacacttttaagtattactcccacttccttttcaaagtggtgact
aaactggtgaaccgaggctatcagccccatttagaggatttcctccttcgcatcaacttc
aacaactactacaaggactcttaa
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integrated database retrieval system
