Poeciliopsis prolifica (blackstripe livebearer): 129359418
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Entry
129359418 CDS
T09758
Symbol
nup88
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129359418 (nup88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129359418 (nup88)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129359418 (nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
DUF6341
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
129359418
NCBI-ProteinID:
XP_054885011
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MLGQLIKMAAFGADRWLNDLPNHTIFKKIRERLDPESERNENETAKNLTFSLGGDFFLWD
DSEGVFYTTNLRQLNSAESDSSGKYQTLQCINPPLFQVCQLLLSPTQHLVALVGQRGVSV
MELPQRWGKRSDFEGGREKINCKTIPVAERFFTSSPSVKLRQAAWYPSETDEPHLVLLTS
DNTIRFYALKSPHTPAKVLPVSQSEDETSSLHPPVRSYAASLGEIAVAFDFGSASGPPRQ
LAAQCSKNQPMYPLYILYENGETYVSYTSYATVLSVSKPVGPLPMYPAAEDNYGYDACAV
LCLPCVPSILVIATETGMLYHCVVLECEEEEEWIRGSEAVPALYVFECVELELTLRVAAE
EDEPQESDFTCPIKLHRDPLCPQRYHCTHEAGVHSVGLIWLNKLQKFIQSNEEDKDSLQE
LAAEKRCIVEHILCTRPLPSRRSAPVRGFLIVSDLSLGATMICITSSYECIMLPLLSSIR
PPSPPLLCSDPGPGSASSPLRGLASDSFEQHIRSILARSSNNPMVLKAGDKEASTPPAEC
LQLLSRATQVFREEYIMKQDMAREEMERRVKLLTGQKVKQVEELASCREERKSLTEAAER
LADKYEDAKYRQEALMNRVKKVLCSLQSQLPVLSNSEKDMRKELQSVSDKLKHLDNCIRQ
VNTKLEYQKTQVDKEMSASKTAVPLNAQQKKVVQDVLREQGQQIGDMMKQIKDIKNHFSF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttaggtcagttgatcaagatggcggcgttcggcgcagatcggtggctgaatgattta
ccaaatcacactattttcaagaagatacgagagaggctggacccggagtccgagagaaat
gaaaacgaaacggccaagaaccttacgtttagtctgggtggagactttttcctgtgggac
gactctgaaggcgtgttttacaccaccaacctccggcagttgaactccgcggagtccgac
agcagcgggaagtaccagacgctgcagtgcatcaacccgcctctgttccaggtgtgtcag
ctgctgctgagccccacgcagcacctcgtcgcgctggtcggccagagaggagtttcggtt
atggagctccctcagcggtgggggaagcggtccgacttcgagggcggccgggaaaagatc
aactgcaagaccatcccggtggcggagcgcttcttcaccagctccccgtcggtgaagctg
agacaggcggcttggtacccgagcgaaaccgacgagccccacctggttctgcttacatcc
gacaacaccatccgattctacgcgctgaagtcgccgcacacgccggccaaggtgctgccc
gtgtcgcagtcggaggatgaaaccagcagcctccacccgccggttcgctcctacgccgcg
tctctcggagaaattgcagtcgccttcgacttcggttcggcttccggtcctccgcggcag
ctggctgcgcagtgctccaaaaaccaaccgatgtatcccctctacatcctctatgaaaac
ggggaaacctacgtgagttacaccagctatgcaaccgtcctcagcgtgagcaaaccggtc
ggaccactacccatgtatcccgccgcggaggacaactacggctacgacgcatgcgcagtc
ctgtgcctgccatgcgtccccagcatcctggtgatcgccacggaaacggggatgctgtat
cactgcgtggtgctggagtgtgaggaggaggaggagtggatccgaggctcggaggcggtt
ccggctctctacgtgtttgaatgcgtggagctggagctcacactcagagtggcagcggag
gaggacgagccgcaggagtctgacttcacctgccccatcaagctgcaccgggacccgctg
tgtccacagcggtaccactgcacccacgaggccggagtgcacagcgtggggctcatctgg
ctcaacaagctgcagaagttcatccaatccaacgaggaggacaaggacagcctgcaggag
ctggccgcggagaagcgctgcatagtggagcacatcctctgcacccggcctctgcccagc
cgccgctcggctccggttcgcggcttcctcatcgtgtctgacctctctctgggagccacc
atgatctgcatcacttccagctatgagtgcatcatgttgccccttctcagctccattcgt
cctccctctccaccgctactttgctccgatccgggtcccggttccgccagctcgcccctc
cgcggcctggccagcgactcctttgagcagcacatccgtagcatcctggcgcggagctcc
aacaaccccatggtgctgaaagctggtgacaaggaggcgtccacgccgccggcagagtgt
ctgcagctcctcagcagagccacgcaggtgttccgcgaggaatacatcatgaagcaggac
atggcacgcgaggagatggagaggagggtgaaactcctgacgggtcagaaggtcaagcag
gtggaggagctggcgtcatgccgggaggagaggaagagtctgacggaagcggcggagagg
ttggcggacaagtacgaagacgcaaagtatcgtcaggaggcgctgatgaatcgggtgaag
aaggttctgtgcagccttcagagccagctgcccgtcctgtccaacagcgagaaggacatg
aggaaggagctgcagagcgtcagcgacaagctcaaacacctggacaactgcatccggcag
gtgaacaccaagctggagtaccagaagacgcaggtggacaaggagatgtccgcgtccaag
acggccgtcccgctcaacgcgcagcagaagaaggtggtccaggacgtcctgagggagcag
ggacagcagatcggagacatgatgaagcaaatcaaagacatcaaaaatcatttcagcttc
taa
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integrated database retrieval system
