KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129359428
Entry
129359428         CDS       T09758                                 
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
  KO
K17890  autophagy-related protein 16-1
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04136  Autophagy - other
pprl04140  Autophagy - animal
pprl04145  Phagocytosis
pprl04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    129359428 (atg16l1)
   04140 Autophagy - animal
    129359428 (atg16l1)
   04136 Autophagy - other
    129359428 (atg16l1)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    129359428 (atg16l1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pprl04131]
    129359428 (atg16l1)
   03029 Mitochondrial biogenesis [BR:pprl03029]
    129359428 (atg16l1)
Membrane trafficking [BR:pprl04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    129359428 (atg16l1)
 Others
  Specific organelles associated proteins
   Auto phagosome
    129359428 (atg16l1)
Mitochondrial biogenesis [BR:pprl03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    129359428 (atg16l1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 ATG16 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_SCAP ANAPC4_WD40 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_ACSF4 eIF2A WD40_RFWD3 Beta-prop_NWD2_C Tricorn_2nd CFAP251_N Beta-prop_IFT140_1st ASA1 CLIP1 HALZ CCDC122 Beta-prop_DCAF12 ADIP HEF_HK FKBP15 NET2A
Other DBs
NCBI-GeneID: 129359428
NCBI-ProteinID: XP_054885023
LinkDB
Position
Unknown
AA seq 605 aa
MAARRADCGWKRHISDQLKLRDRVQRHTFEQIVQQYNRLLEKSDLQTVLTERYQTEKYDV
PRGHEASSMDSSRSDSLHQEMSQMRIRHQEELTELHKKRGELAQTVIELNNQIQQKDREI
QSNEARMLEYQQQIAGLEGDCRDLRNNLQELEMANQTLKDEYDALQITFSALEEKLRKTS
EDNQELVSRWMAEKALEANRLNAENEKDTRRRQAKLQKDLADAAKEPLPIEQDDDIEVLA
EDGGKGAGETSPNRPISRTLSRKTSQQPQGGLLDSISNIFGRRRSANSLGTSPETTETPS
GGCAEVRVPTTALHVFEAHDGEVNTVRFSPGSRLLATGGMDRRVKLWEVISGRCEAKGAL
TGSNAGITSIDFDSAGSYLLAASNDFASRIWTMDDYRLRHTLTGHSGKVLSARFLLDNAR
IVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRAESIV
REMELQGRVTSLDLNHDRSELLTCSRDDVLKIIDLRSNAIRQTFSAQGFKCGADWTRVTF
SPDGSYVAGGSADGALYVWNVLTGKLDRTLDRNHSSAINSVSWSPSGTYVASVEKGSRAI
LWSDM
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggcggcgcggcgggctgactgcggctggaagagacacatctcagaccagctgaagctc
agagacagagtccagagacacacctttgagcagatcgtccagcagtacaatcgtctcttg
gagaagtctgacctgcaaaccgtcctcactgagcgataccagacagagaagtatgacgtc
ccgagaggacatgaggccagctccatggactcgtcccgtagcgactcccttcaccaggaa
atgtcccagatgaggattcgccaccaggaggagctgaccgagctgcacaagaaacgaggc
gagctggcgcagactgtgatcgaactcaacaaccaaatccagcagaaggatcgagagatc
cagagcaacgaggccaggatgttggaataccagcagcagatcgccggcctggagggagac
tgtcgggatctgaggaacaacctgcaggagctggaaatggccaatcagacgctgaaggac
gagtacgacgctctgcagatcaccttctccgccctggaggagaagctgaggaagacgtca
gaggacaaccaggagctggtgtcccgctggatggccgagaaggccctggaggccaaccgg
ctcaacgccgagaacgagaaggacaccaggcgcagacaggccaaactgcagaaggacctg
gcggacgctgccaaggagccgctgcccatcgaacaggacgacgacatcgaggtgctggct
gaggacggagggaagggagccggagaaacgtcaccaaaccgaccaatcagcaggacgctg
agcaggaaaacgtcccagcagcctcagggcgggctcctcgactccatctccaacatcttc
ggcaggcgtcggtcggcgaactccttgggcacatctccagaaaccacagagacgccgtcg
ggaggctgtgcggaggtccgggtgccgaccacggcgctgcacgtctttgaagctcatgac
ggagaggtgaacaccgtccggttcagccccggctcccggctcctagcgaccggggggatg
gaccgcagggtgaagctgtgggaggtgatctcaggtcgctgtgaggctaaaggagctctg
accggcagcaacgcgggaatcaccagcatcgacttcgacagcgctggctcctacctgctc
gctgcgtccaacgacttcgccagtcgaatctggacgatggacgactacagactgaggcac
accttgacgggtcacagcgggaaggttctgtctgctcgattcctattggacaacgctcgc
atcgtgtctgggagctacgaccgaacgctcaaactgtgggacctgcgcagcaaagtctgt
atgaagacggttttcgccggctccagctgtaacgacatcgtttgcacggagcagtgcgtt
atgagcggacacttcgataagaaggtccggttctgggacatcagggcggagagcatcgtg
agggagatggagctgcagggccgggtgacgtctctggacctgaaccacgaccgcagcgag
ctgctgacctgctccagagacgacgtgctgaagatcatcgacctgcgcagcaacgccatc
cggcagaccttcagtgctcaggggttcaaatgtggagccgactggaccagagtcaccttc
agtcctgacggcagctacgtggccggcgggtcagcagatggcgctctctacgtctggaac
gtcctgacggggaaactggaccggactctggaccgaaaccacagctcggccatcaactct
gtgtcctggtcgccgtcgggaacgtacgtcgccagcgtggagaagggcagcagagccatc
ctgtggtctgacatgtga

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