Poeciliopsis prolifica (blackstripe livebearer): 129359551
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Entry
129359551 CDS
T09758
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129359551 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129359551 (cnot2)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129359551 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129359551 (cnot2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
129359551
NCBI-ProteinID:
XP_054885167
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MFGSRKPFPDFGDGVDNDLADDMYYNQSMFHRSDKDMLSSPSPSSSSQLSQLGVSLYGPQ
SAIGFPVRNMGNSTPQLNRNLTQGTQLASHITPTTGVPSMSLHTPSSPSRGTISRNILNH
SQVGQGIGLTGRTSSMGSSGLGSPNRSSPSIICMPKQQPARQPCTINSMSGFGMNRNQAF
GMNNSLSSNIFNGTDGSDNIMGLDLSDFPALADRSRREGTGNPTPVLNPLAGRAPYVGMV
TKPSTDQTQDFSIHNEDFPALPGPNYKDPTLNNDDSKTNLNSTSKSTSSTDGPKFPGDKT
TSAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMVGLLTFIRAAETDPGMVHLALGSDLT
TLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLARYGEDL
LFYLYYMNGGDLLQILAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYYFFD
CLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctagaaaaccctttccggatttcggcgacggagtcgacaacgacttggct
gatgacatgtactacaaccagtccatgttccacaggtcggacaaagatatgttgtcctct
ccttcgccatcatcgtccagtcagttgtcgcagctcggtgtgagtttgtacggtccacaa
agtgcaatcggcttcccagtcaggaacatgggaaacagtacgcctcagttaaaccgaaat
ctaacacaagggacgcagctagcaagtcacatcaccccaacaacgggtgtcccctccatg
tccctacacaccccttcctcgccaagcagaggaacaatatcgagaaacatcctgaaccac
tcacaggttggtcagggcattgggttaaccggcaggaccagcagcatgggcagctcaggg
ctgggaagtccgaaccgcagctcacccagcatcatctgtatgcccaaacagcagccagcg
cgccagccctgcaccatcaacagcatgtcaggatttggtatgaaccgcaatcaagctttt
gggatgaacaattcattatcaagcaacatcttcaatggcacagatgggagtgataatata
atgggcctggatctgtcagacttccccgcattagcagaccggagtcggagagaagggact
ggaaatccaacaccggtgctgaacccgctggctggacgtgctccttatgttggcatggta
acaaagccatcgactgatcagacacaagacttctccatacataacgaggacttccctgca
ctgcctgggccaaattacaaagaccccacactcaacaacgatgacagcaaaactaacttg
aactccacaagcaagagcacatccagcacagatggtccgaagttccctggagacaagacg
acctcggcacagaacaacaaccagaagaaagggatccaggtgttgcccgatggtcgggtg
acaaacattccctcaggaatggtaacggaccaattcggcatggtgggcctgctgacgttt
atccgggctgcagaaaccgatccggggatggtgcatctggcgcttggaagtgacctcaca
acactgggactcaacttaaattcaccagaaaacttgtatccaaagttcgcctctccctgg
gcttctgcaccatgtcgaccgcaagacatcgatttccatgttccgtcggagtatttaacc
aacatccatataagggacaagttagctgcaattaagttggctcgatacggtgaagacctg
ctgttctacctgtactacatgaacggaggggacctgcttcagatcctggcagctgtggag
ctcttcaaccgggattggagataccacaaagaggagcgagtttggataacaagggcgccc
ggcatggaacccaccctcaagaccaacacctatgagagaggcacctactacttcttcgac
tgtcttaactggaggaaagtagccaaggaatttcatctggaatatgacaagctggaagag
aggcctcacgtgccgacaacgttcaactacaatccagcccaacaggccttctaa
DBGET
integrated database retrieval system
