Poeciliopsis prolifica (blackstripe livebearer): 129359862
Help
Entry
129359862 CDS
T09758
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129359862 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129359862 (dis3)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
129359862 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
129359862
NCBI-ProteinID:
XP_054885769
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MLKSKTFVKKTRSGGVLKVVREHYLRDDIWCGSEVCTECKQDSTVLQRDACIESSLCPDP
HYLVPDTNVVLHQIDVLEDPVIRNVVILQTVLQEVRHRSAPVYKRLKDIIHDQGRHFYTF
TNEHHRETFIEREPGESANDRNDRAIRVAVKWYSQHLKTAESGSDGLKVVLLTNDQGNKL
KAEENGLVVYKFDEYIKSLIGNPELVECLALSNDDKSEITSSKVLFPEHLPLSKVQAGIK
SGSFLQGTFRASRDNYLEATVFVQGEGEDSTEVLIQGLQNLNRAVHQDMVAVQLLPKNQW
VAPSSVVLQDDGAAKDDNVDEDEEEKVLTGPLTETARRATGKVVGIIKRNWRPFCGMLNV
SQIKESTRHLFTPADRRIPRIRIETRQASTLAGQRIMVAIDGWPKDSRYPNGHFVRSLGG
AGEKDTEEEVLLLEHDVPHQAFSQAVLSFLPKMPWSITPEDMAQRQDLRHLTVCSVDPPG
CTDIDDALHCRELENGKLEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVPE
LLSSNLCSLRSNVERFAFSCIWEMNHKAEILKTRFTKSVIHSKASLTYAEAQLRIDDANK
NDDITKSLRSLNKLAKILKRKRIENGALTLSSLEVRFHVDSETHDPIDLQTKELMETNSM
VEEFMLLANISVAQKIYDEFPESALLRKHPAPPPSNYDILIKAAKSKNVRIHTDSAKALA
DSLDVAKVDGFQYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRY
ADIIVHRLLAVAIGADSTYPDLMDKHKQSALCNNLNYRHKMSQYAQRASVAFHTQLFFKT
RGILNEEGFVLFVRKNAIIVLIPKFGLEGTVFFDSKDKASPNLVFDEEGPTLKVEQHTFH
IFDQVKVTISLDDSNIQHQKIRMALTKPVIPGVSVPAPEAEPQAKKQKLDC
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtctaagaccttcgttaagaagacccgatcgggtggagtgttgaaggtcgta
cgtgagcattacctgagagatgatatttggtgtggaagtgaagtctgcactgagtgcaaa
caggactccacggtgctgcagagagacgcgtgtattgagagcagtctgtgtcccgaccct
cactatctggttcctgacaccaacgtagtgctgcatcagattgacgtgttggaagatcct
gtgattcgcaacgtggtaatcctccagactgttcttcaggaggttcgtcatcgcagtgca
ccggtttataaacgcctgaaggatatcatacacgaccaaggaagacacttctacacattc
accaacgaacaccacagagagacattcatcgaacgtgaaccaggggagagcgccaatgac
cgtaatgatcgggctatccgagtggccgtcaaatggtacagccagcatctgaaaacagca
gagtcgggctcagatggtctcaaggtggtcctcctcaccaacgatcaaggcaacaagcta
aaggctgaagagaacggcttagtggtttacaaatttgatgaatacattaagagtctgatt
gggaaccccgagttagtggagtgcttggctttgtccaacgatgataagagtgagatcacc
agcagtaaagtgttgtttccggagcatctccctttgtcgaaggtccaggcgggaatcaag
tctggctcatttctccagggaaccttcagggccagcagggacaactatctggaggccact
gtttttgtccaaggagagggggaggacagcacagaggttcttatccagggtcttcagaac
ctgaacagagcagtgcaccaggatatggttgctgtccagctgttgccaaagaatcagtgg
gtggcgccgtcgtcagtcgtactgcaggacgacggtgcagcgaaggacgataacgtcgat
gaggacgaggaggaaaaagtgttgacgggaccattaactgagacggccaggagggcaaca
ggaaaagtggtgggaatcatcaaaaggaactggaggccattctgtggcatgctgaatgtc
tcccaaatcaaagaatccacccgccaccttttcaccccagcagatcgccgtatcccacgc
attcgcatcgaaacacgacaagcctccactcttgcaggacaaaggattatggtggccatt
gatggctggcccaaagactctagatacccaaatggtcatttcgtccgcagtctgggaggc
gccggggagaaggacaccgaggaggaagtcctgcttctggagcatgatgttccacatcag
gccttctctcaggccgttctcagtttccttcctaaaatgccgtggagcatcacaccagag
gacatggcacagaggcaggacctgaggcatttaacagtgtgcagtgtggatcctccagga
tgtacagatatagatgatgctctgcactgcagggagctggaaaacgggaagcttgaggta
ggagttcacatcgctgatgtcagtcactttatcagacctgggaatgctctggacaaagag
gcggccaaccgagggaccaccgtgtacctgtgtggcaaaagaatagacatggtgcctgag
ctgctcagctctaacctttgctctctacggtccaatgtggagaggtttgctttttcatgt
atttgggagatgaaccacaaagcagaaattttgaagactcggtttacaaaaagcgtaatt
cactccaaggcgtctctcacttacgccgaggcccagttgaggatagatgatgccaacaag
aacgacgacatcactaaaagcttgaggagcctcaacaaactcgcaaagattctgaaaagg
aagaggatagaaaatggggccctgacgctgtcttccttagaggttcggttccatgtggac
agcgaaactcatgacccaattgatttgcagactaaggaactcatggagacaaactccatg
gtggaggagttcatgttgctcgccaatatttcagttgctcagaagatttatgatgaattt
ccagagagcgctctcctgaggaagcatccagctccccctccgtccaactacgacatcctg
atcaaagccgcaaagtccaagaatgtgaggatccacacagattcggctaaagcgctggcc
gattccctggatgtggccaaagtggacggcttccagtattttaacacgctcctgcgtatt
ttagccactcgctgcatgatgcaagccgtttatttttgttctggcatggacagcgacttc
caccattacggccttgcttcgcccatctacactcacttcacctccccgatcaggaggtac
gctgacatcattgtgcaccgcctgctggcagtggccatcggagcagacagcacctacccc
gacttgatggacaaacacaaacagtcggccctctgcaacaacctcaactacagacacaaa
atgtctcagtacgcacagagagcgtctgtcgccttccacactcagttgttcttcaagacc
agaggaattctgaacgaggagggattcgttctgttcgtgcggaagaacgcgatcatcgtt
ctgatcccgaagttcggtctggaaggaaccgttttctttgactccaaagacaaagcttct
cccaacctcgtttttgacgaagagggtcccactctgaaggtggagcagcacactttccac
atatttgaccaggtgaaggtcaccatcagcctggacgactccaacattcagcaccagaag
atccgcatggctctaacaaaacctgtgattccgggtgttagtgttcctgcacctgaagcg
gaaccacaagccaagaagcaaaaactggactgctga
DBGET
integrated database retrieval system
