Poeciliopsis prolifica (blackstripe livebearer): 129360177
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Entry
129360177 CDS
T09758
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129360177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129360177
03016 Transfer RNA biogenesis [BR:
pprl03016
]
129360177
Enzymes [BR:
pprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
129360177
Messenger RNA biogenesis [BR:
pprl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
129360177
Transfer RNA biogenesis [BR:
pprl03016
]
Prokaryotic type
tRNA degradation factors
129360177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH_KRR1_2nd
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
129360177
NCBI-ProteinID:
XP_054886277
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MRYLAGLGRSFARLHVRSCHQSIYSRNSNPRRVGVDLGEKKLEISSGSLARFADGSAVVQ
LGDTSVMVTAVSKTKPSLLQFMPLVVDYRQKAAAAGRIPTNYLRRELGTTDNEILTSRLI
DRSIRPLFPPGYFYDTQVLCNLLAVDGVNDPDVLAINAASAALALSDIPWHGPIGAVRVG
MVDGELLVNPTRAEMASSSLNLIVAGAPSSQVVMIEASAENVLQQDFCHAVKVGVKHTQQ
IILAIQQLVREQKITKRTPVKMFSVPTEMVEHVRQLSAERIYAVFTDYTHDKISRDEAIN
KVRLETEETIKEKFPQAEPFEVIESFNSVSKEVFRNLVFNEYKRCDGRELTALRKISCEV
DLFKPLHGSALFQRGQTQVLSSVTFDSLESSVKTDIITTALSGIKDKNFMLHYEFPPYAT
NETGKMGGLNRRELGHGALAEKALRPVIPKDFPFTIRVTAEVLESNGSSSMASACGGSLA
LMDSGVPISSAVAGVAIGLISKSNPEKPTEIEDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIPGLPLKVVMEAIQQATVAKREILGIMNKCIAKPREKRKENGPVVENVRVP
VSRRARFVGPGGYNLRRLQAQTGVTISQMDEETFSVFAPTPGAMNEAQDFIKDICKDDQE
QQLEFGAIYTATISEIRDVGVMVKLYPNMTPVLLHNSQLDHKRIKHPSALGLEVGQEIQV
KYFGRDPTDGRMRLSRKVLHSPATNVVKTLSEKQSISMAASSIHRDSSDS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagatatttagctggactcggacgctcgttcgctcgccttcatgtccgttcctgtcac
cagagcatttatagcaggaactccaacccacggagagtgggagtggaccttggagagaag
aaacttgaaatctcttcagggagtttggccaggtttgctgatgggtctgctgttgtacag
ctgggagacacctcagtgatggtgaccgccgtcagcaaaaccaaaccgtcgctgcttcag
ttcatgccacttgttgtggactacaggcagaaagcagcggctgcgggtcgaatccccacc
aactatttgagacgagagctgggcactacagacaatgaaatcctcaccagcagactcatc
gatcgctcgataaggccactttttcctcctgggtacttttatgacactcaggttctttgt
aacctgcttgcagttgatggtgtcaatgatccagatgttctagcaattaatgcagcttcg
gctgctctggctctgtcggacatcccttggcatggacccataggtgctgtgagagtcggc
atggttgatggagagctgctggtcaaccccaccagggcagagatggcgtccagcagtctg
aaccttattgtggctggagcccccagcagtcaagtggtgatgatcgaggcgtcggccgag
aatgtgctgcagcaggacttctgccatgcagtgaaggtgggagtcaaacacactcagcag
atcatactggccatccagcagctggtgcgggagcagaagatcaccaagcgaacgccggtg
aagatgttctctgttcccacggagatggtggaacacgtgcggcaattatcagctgagagg
atctatgctgttttcacagattatacacatgataagatttcaagagatgaagcgatcaat
aaagttcgactagaaactgaggaaaccataaaagaaaaatttccacaagctgagccgttt
gaagtcatcgaatcattcaacagtgtgagcaaagaggtcttccgaaatttagtgtttaat
gaatacaagagatgcgatgggagggaactgacggctttaaggaagatttcctgcgaagtc
gacctttttaagccgctccatggctcagctctgtttcagagaggacaaactcaggtgctt
tccagtgttacatttgactccctggagtcgagcgtcaagacagatatcatcactacggct
ctgagtggcatcaaagacaaaaacttcatgctccattatgaattccctccttatgcaacg
aatgagaccggaaagatgggaggactcaacaggagagaacttggacacggcgctcttgca
gagaaggccctgaggcccgtcattcctaaagatttccctttcaccatcagggtcacagct
gaagtgctggagtcaaacggatcgtcttcaatggcttcggcatgtggaggcagcctggcc
ctcatggattcaggtgttcccatctcctctgcggtggcaggtgtcgccatcggtctcatt
tccaagtcgaacccggagaaaccaaccgagatagaagactacagattgctgacggatatc
ctgggaatagaggactatctgggagacatggacttcaagctggcaggaacaaacaaaggc
atcactgctttacaggctgatgtgaagattccaggtttacctctaaaggtggtcatggag
gcgattcagcaggccacagtggcaaagagggaaatattgggcattatgaacaaatgtata
gcaaaacccagagagaaaaggaaggagaacgggcctgttgttgaaaatgtgcgggtgcct
gtgtctcggagagctcgctttgttggcccgggaggatacaaccttcgcagacttcaggct
cagacaggtgttacaataagccagatggacgaggagactttttctgtgtttgccccgact
cctggagcgatgaacgaagcccaagacttcatcaaagacatctgcaaagacgatcaagaa
cagcagctggagtttggagctatctacactgccacaatctcagaaataagggacgttggt
gtcatggtgaaactttatcctaacatgactccagtcctgctgcacaattcccagttggat
cacaaacgaattaaacatcccagtgctttgggcttagaggtggggcaagagatacaggta
aagtactttggtcgagatccaacagacggaagaatgaggctgtctcggaaggtgcttcac
tcccctgccacaaacgttgtcaagacactgagtgagaaacagagcatctccatggctgcc
agcagcatccacagggacagcagcgattcatga
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