Poeciliopsis prolifica (blackstripe livebearer): 129360242
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Entry
129360242 CDS
T09758
Name
(RefSeq) cleavage stimulation factor subunit 2-like isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129360242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129360242
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129360242
U7-dependent histone pre-mRNA processing factors
129360242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
129360242
NCBI-ProteinID:
XP_054886315
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MANVAAATVAAAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
APIIESPFGDSVSPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQ
LAYALLQAQVVMRIVDPEIALKMLHRQTAVQPLVSSSQGGGAPPVNPPVQPNVQVSQPQP
VPVMHVNGAPQMMQPANMGVVPNMPVPGPVPGPGQIGPPGNLQNSPTGSAGPAAIERPQG
PGGIPPRGLLGDGPNDPRGGTLLSVTGEVIDPNRAYMAAPPHQAPPVHIPQMGGGPQMGG
GPQMGGGPQMGGGPQMGGGPQMGGGPQMGSGPEMRGPPMSEPRTMMVDPRGPPMMEPRGP
PMEPRGRDPRAMDARGPVAGQRVPMVPGMQGPVPHAMGPNVPPSARPGPGISGVPPSGGG
FSPGQSQVSTQDQEKAALIMQVLQLTPEQIAMLPPEQRQSILILKEQIQKTASGAP
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgttgctgcagctaccgtggccgctgcggccgcggctgccgccgccaacaga
gacccggccgtggataggtcactacgatcagttttcgttggaaacattccatatgaagcc
acagaagagcagctgaaagacatattttctgaagtaggacttgttgtcagcttcaggtta
gtgtatgacagagagacaggaaagccaaaaggatatggcttctgtgaataccaggaccag
gaaacggcgctcagcgccatgaggaacctgaacgggagagagttcagtggtcgggctctc
agagtcgacaatgcagctagtgaaaaaaataaagaagagctcaaaagtctggggactgga
gcccccatcatcgagtctccttttggagacagcgtgtcgccagaggaggctccagagtcc
atcagcagagctgtggcgagtcttccacctgagcagatgtttgagttgatgaaacagatg
aagctgtgtgtacaaaacagcccccaggaggcgagaaacatgctgctgcagaacccgcag
ctggcctacgctctgctgcaggcgcaggtcgtgatgcggatcgtcgacccggagatcgct
ttgaaaatgttgcatcgtcaaacagctgttcagcctctggtgtccagcagtcagggtgga
ggagcaccacctgtcaatcctcctgttcagcccaatgtgcaggtgtctcagccacaacct
gtgccagtcatgcatgtgaatggagctcctcagatgatgcagcccgccaacatgggcgtt
gtccccaacatgcctgtaccgggcccagtaccaggacccggacaaatcggacctccagga
aacctacagaattcccccacaggatcagccggacctgctgctatcgagcggccacaagga
ccgggcggtatcccacccagaggcctgttgggcgacggacccaatgatcccagaggagga
actctgctgtctgtcactggagaggtcatcgaccccaaccgggcctacatggccgctccg
cctcaccaggccccgccggtacacataccccagatgggaggcgggccccagatgggaggc
gggccccagatgggaggcgggccccagatgggaggcgggccccagatgggaggcggcccc
cagatgggaggcgggccccagatgggaagtgggcccgaaatgagaggccctccgatgtct
gagccgcggaccatgatggtggacccgcgagggccgccgatgatggagccgcggggaccg
ccgatggaacccagaggccgggacccgagggcgatggacgctcgcgggccagtggcgggt
cagagggttcccatggtgcctgggatgcagggcccggtcccccacgccatgggtccaaac
gttcctccgtctgcaagaccgggtccgggtatttctggcgtcccgccctcaggaggaggc
ttcagtcccggacagagtcaggtctccactcaggatcaggagaaggccgccctcatcatg
caggtgctgcagctgaccccagagcagatcgccatgctgccgccggagcagcggcagagc
atcctcatcctcaaggagcagatccagaaaaccgcctccggcgctccgtga
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