Poeciliopsis prolifica (blackstripe livebearer): 129360640
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Entry
129360640 CDS
T09758
Symbol
si:dkey-30c15.12
Name
(RefSeq) B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04371
Apelin signaling pathway
pprl04514
Cell adhesion molecule (CAM) interaction
pprl04517
IgSF CAM signaling
pprl04518
Integrin signaling
pprl04519
Cadherin signaling
pprl04520
Adherens junction
pprl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129360640 (si:dkey-30c15.12)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129360640 (si:dkey-30c15.12)
04517 IgSF CAM signaling
129360640 (si:dkey-30c15.12)
04518 Integrin signaling
129360640 (si:dkey-30c15.12)
04519 Cadherin signaling
129360640 (si:dkey-30c15.12)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129360640 (si:dkey-30c15.12)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129360640 (si:dkey-30c15.12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129360640 (si:dkey-30c15.12)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129360640 (si:dkey-30c15.12)
04090 CD molecules [BR:
pprl04090
]
129360640 (si:dkey-30c15.12)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
129360640 (si:dkey-30c15.12)
Cell adhesion molecules [BR:
pprl04515
]
Cadherins
Major cadherins
129360640 (si:dkey-30c15.12)
CD molecules [BR:
pprl04090
]
Proteins
129360640 (si:dkey-30c15.12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
TcfC
Motif
Other DBs
NCBI-GeneID:
129360640
NCBI-ProteinID:
XP_054886943
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MKDMTGNRKILIGTLIFWQLKCLVSLDPAWTQLRFLGKIHNDAKSPNESNHEDDAASVLQ
LPWHSLAGGLRRMKRGWVIPPINFPENNGGPYPKFLVTLKSSKAETVAITYKISGPGADQ
PPEGIFTVDDRSGMIYVTEPLDREKQAKYTLWAYAQTGTIHAEQPMELIINVIDQNDNKP
EFNQTVFTGRVSESAKVGKPILSVTAEDKDDPDTYNAIIRYRLLSQIPGMPKEEMFAINA
VNGRISLKEQGLDRETHPEYTLIVTAADMKGEGLITTCTTIITVTDSNDNAPNFIDTSIS
TTVHENEIGVEVARLKATDMDESGSPNSNTKYSIIKGNEAGAFNITVGSNKMEGIITTAK
ELDFENLSEYKLLVAVTNEAPFSVPVSTSTATVTIKVIDRNEPPVFSPAEVHITLSEDVR
VGTAVVQLKAKDPDTARAQRVTYKLYNDSARWLSTNHSTGSVKVVSSMDRESQRVRENKY
TVLVLAYDDDLIPATGTGTLVVSLLDVNDHLPEVRQKTATLCNSDPFPALLDVVDLDGPG
HAGPFTVELIEGHKKNWIVKTNSTSNVAALYPKQNLPPGNYNVTMMIYDVGGLYKDSTLV
VEVCHCQGGVDACLPRSKGHEDIPSFATPLLVSVFGLLLLLLLLLLLLLLLSRRRRKEAP
LLEDLTRDDLFCYSEEGGGEDDRDYDLSQLHRGLDNRPEVFSTDVFPTVQARPGYRLQIQ
ANEDVCNFIEHNLQAANRDPTAPPYDSLLVFDYEGGSSEVGSLSSIQSSDSDVDQDFESL
NQWGPCFGRLADLYAKGREEEDDDNQTLPGKSELF
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatgactgggaacaggaagattttgatagggaccctcatattctggcaactc
aagtgtttggtatctctagatccagcatggacacaactgaggttcttgggcaaaattcac
aatgatgcaaagagtccaaatgaaagcaaccatgaggatgatgctgcctccgttctccag
ctgccatggcattcactggctggcggattgaggcggatgaagaggggctgggttattcca
ccaattaactttccagaaaacaatgggggaccatatcccaaatttctggtgacacttaag
tcaagtaaagctgaaacagtagccataacatacaagatcagtggcccaggtgcggatcag
ccccctgaaggtatttttactgtcgatgaccggtctggtatgatttatgtgaccgagcca
ctggacagggagaaacaagccaaatacactctgtgggcttatgcccagacaggcacaata
catgcagagcagcccatggagctcatcatcaacgtcattgaccagaatgacaacaaacca
gaattcaatcagacagttttcaccggcagagtgagcgaaagtgccaaagttggtaaaccc
atcttgagtgtaacagctgaagataaggacgatccagatacatacaatgctataattagg
tatcgactgctatctcagatacctggaatgcccaaagaggagatgtttgctataaacgca
gtgaatggacggatcagtctgaaggaacagggactggatagagagactcatccagaatat
acactgattgttactgctgctgatatgaaaggggaaggtctgatcacaacctgcactact
atcattaccgttactgacagcaacgataatgctccaaatttcattgacacatctatatcc
acaacagtccatgagaatgagataggagtggaggtagcaagactgaaagccactgacatg
gacgagtcaggatctccaaattcaaacaccaaatattccatcatcaaaggcaatgaagcg
ggagcctttaacatcaccgttggttcaaataagatggagggaataatcacaactgccaag
gaactggattttgagaacttgtctgagtacaaactgttggtggcggtaacaaacgaggcg
ccattttccgtccccgtgtccacatctacagccacagtcacaataaaagtcattgaccga
aacgagcctcctgttttcagcccagccgaggttcacataaccctctcagaggatgtgaga
gtcggcacggccgtggtccagctgaaagcaaaggacccggatacagccagagcacagcgc
gtaacatacaaactctacaacgacagcgcccggtggctgagcaccaaccacagcactgga
tcagttaaagttgtgagcagcatggaccgagagtcacaacgtgtcagagaaaacaaatat
acagttttagttttggcttatgatgatgatcttattccagctacaggaactggtactctg
gttgtgagtttgttggatgtgaatgaccaccttccagaggtcaggcagaaaacagccact
ctgtgtaactctgacccttttcctgcactcctggacgtagtggatctggatggaccgggt
catgctgggccatttactgtggagcttatagaaggacataagaagaactggattgtcaaa
accaattccacaagcaatgtggcggctctctaccccaaacaaaacctacctcctgggaac
tataatgttaccatgatgatttatgatgttggggggctctacaaagacagtactctggtt
gtagaggtgtgccactgtcaaggtggagtagatgcctgtttgccaaggagtaaaggacat
gaagacattccttcttttgcaacccctctactggtatctgtctttggcctcctgttgctg
ctcctgctactcctgctgctcctgctgctgctgagcagaaggaggagaaaggaggcccct
ctcctggaagatctgacccgtgatgacctattctgctacagtgaggagggaggaggtgaa
gacgacagggactatgatttgtcccagttgcacagagggctggacaaccgacctgaagtc
ttcagcacagatgtgtttcctactgtccaggctcgaccggggtaccgtctgcaaattcaa
gccaacgaggacgtttgcaattttattgaacataacctacaagcagcaaacagagacccc
acagctcctccgtatgactctctgctcgtgttcgactatgagggtggaagctctgaggtg
ggttcactcagctccattcagtcttcagattcagacgtggatcaggattttgagagtttg
aatcagtgggggccatgctttggcagactggcagacctgtacgcaaagggaagagaggag
gaagacgatgacaaccaaacactgccaggaaaatcagaattattctaa
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