Poeciliopsis prolifica (blackstripe livebearer): 129360652
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Entry
129360652 CDS
T09758
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
pprl03015
mRNA surveillance pathway
pprl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129360652
09122 Translation
03013 Nucleocytoplasmic transport
129360652
03015 mRNA surveillance pathway
129360652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129360652
03041 Spliceosome [BR:
pprl03041
]
129360652
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
129360652
Spliceosome [BR:
pprl03041
]
Common components
Common spliceosomal components
Cap binding complex
129360652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Vfa1
AAA_13
RRF
Importin_rep_6
AAA_11
DUF1690
Barstar
DUF1664
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
129360652
NCBI-ProteinID:
XP_054886951
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSRRRHSDENDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YNEAVYLVRFLSDLVNCHVIAAPSMVVMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLSQIEGYLKRRVKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPIPRVIFRMFDYTDAPEG
PVMPGSHSVERFVIEENLHCIIKTHWRERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPLPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRFINWFSHH
LSNFQFRWSWDDWADCLTLDLEKPKPKFVKEVLEKSMRLSYHQRIVDIVPPTFSALIPAE
PLFSFKYGDENASLPGYPVSITVSNAIKNRASNEEILAILKEVPNPNQEDDDDEGESFNP
LKIDVFLQTLLHLAAKSFSHSFSALGKFHEILKNLTESDDGKLHILKVVYEVWRNHPQMI
AVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTRLFIWEILHSTIRKMNKHVQKIQKELEE
AKDKLEKQQHKRRDSGDDEDMEKNSEEDEEGQLEEQIERLQEKVESAQSEQKNLFLVIFQ
RFIMLLTEHLVRCETGSVDISTPWYKNCIERLQQVFLMHHGTIQQYMGTLENLLFTAELD
HHILAVYQQFCALQL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggaggcgacatagcgatgagaacgacggaggtcaagctcataagaggagaaga
acatctgagcccattgaaattgaagatcgtctggagtctttgatatgtcgcgtaggagaa
aaaagcacctcttccctcgagagcaacctggagggcctcgcaggcgtcctggaggctgac
cttcccaactacaaaaacaaaatcctgcgtattttatgtgctgtcgctcgcctgctgcca
gagaagctcaccgtctacacgactttagtcggtctcctcaatgccagaaactacaacttt
ggtggcgagtttgtggaggcgatgatcaggcagctgaaggagactttaaaaaacaacctg
tataatgaagcagtttacctggtgcgctttctgtctgatttggttaactgccatgtcatc
gccgctccatctatggtggtaatgtttgaaaattttgttagtgttacccaagaggaagac
gtgccacaggttcgatcggactggtttgtgtatgtcgttctgtcctgtcttccctgggtt
gggaaggagctttatgagaagaaggacgttgaaatggaccgactcctcagtcagattgaa
ggctacctcaagaggagagtgaagactcatgttcctatgctgcaggtgtggacggcagag
aaacctcatccacaggaagagtatctggactgtctgtgggcccagattcagaagctgaag
aaagaccgctggcaggagcgccacatccttcgtccgtacatcgctttcgacagcgttctc
tgtgaggcgctacagcacaacctgcccccgttcaccccgccgggacacatgcctgacgcc
cagtaccctatcccccgggtcatcttccgcatgttcgactacaccgacgccccagagggt
cccgtcatgccgggcagccattctgtggagcggtttgtgattgaagaaaacctgcactgt
attatcaaaacccactggagagagaggaaaacatgtgctgcccagttgctcagttaccca
ggaaaaaacaagatcccactgaactaccacatcgtggaggtgatctttggagaacttttc
cagctcccattaccgccccacattgacgtcatgtacactacacttctcatcgagctctgc
aagctgcagccagggtcactccctcaagttctggcccaggccaccgagatgctttacatg
aggctggacacaatgaacaccacctgcatagacagattcatcaactggttttcccatcat
ttgagcaacttccagtttcgatggagctgggatgactgggcagactgtttgacattggat
ttagagaaaccaaaacccaagtttgtcaaagaggttctggagaaatcgatgagactttca
taccatcagaggatcgtggacattgtccctccaactttctccgccctcatccctgctgag
cccctcttttctttcaaatatggagacgagaatgcctcattgccaggttacccagtttcc
attacagtttccaacgccataaagaaccgagcgtccaatgaggaaatcctcgccatcctc
aaagaagtccccaacccaaaccaggaggatgatgatgatgagggtgaaagcttcaaccca
ctgaagatagatgtgtttcttcagactcttctccatctggcagcgaagtccttcagccat
tccttcagcgcgctcggcaaattccacgagatccttaaaaacctgacggaaagtgacgac
gggaagctgcacatcctgaaagtggtttatgaggtgtggaggaaccaccctcagatgatc
gccgtgttggtggataaaatgattcggacgcagatcgtggattgtgccgctgtcgccaac
tggctcttctctcaggacatggctcacgaattcaccagacttttcatctgggagattctg
cactcaaccatccgaaagatgaataaacacgtgcagaagatccagaaggagctggaggaa
gctaaagataagctggagaaacagcagcacaagaggagggacagcggggacgacgaggac
atggagaagaacagcgaggaggacgaggagggtcagctggaggagcagattgagaggctg
caggagaaggtggagtcagctcagagcgagcagaaaaacctcttccttgtcatcttccag
cgcttcatcatgctgctgacggagcatctggttcgctgcgagacaggcagcgtcgacatc
agcacaccctggtataaaaactgcatcgagcggctgcagcaggtcttcctcatgcatcat
ggaaccatccagcagtatatgggaactctggagaacctgctgttcactgctgagcttgac
catcacatcctggccgtctaccagcagttctgtgcgctgcagctctga
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