Poeciliopsis prolifica (blackstripe livebearer): 129361079
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Entry
129361079 CDS
T09758
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129361079 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129361079 (xrcc5)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
129361079 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
129361079
NCBI-ProteinID:
XP_054887705
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSAPGEEPPFAQAKKVIQKFVQRQVFAETKDELALVLFGTD
YTKNPLARDGQYQNITVHRHLMVPDFELLEEIEHQIHPENQQADWLDALVVSMDLLKTET
QGKKCDRLNIVLLTDLSTEASSDKLDVIIENLKQAEINMQFFLPFPVEDEEEGEGDGDRT
GSGDPGRGKGLSREQRSGLEMIKNIMLSLDEEEGLEEIYTFRNAMEHLCMFKRIERRPMA
WPCQLTIGSSLSIRIVGYKAVTEEKLKKMWITVDAQTNKRDDVKRETVYCLDDDNETEVQ
KEDIIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTKKNLVLRHQFMGTQIVKIFP
ARDDEHAGVAMSALIRGLDELNMVAIVRYAYDRRSNPQVGAAFPCIKPEYECLLYVQLPF
MEDLYGREFTFPSLENNKKIAPSETQLSAIDSLIDSMMLVTEDEDLLKPHHLPNPAFQRH
FQCLHHRAVHPDSPLPPMEPWLEAALDRPEVIQERCQAPLEEIKKLFPLTEVEKKKKLKT
SAQIFGKDSEEPDAKKAKEDEAEDEYNLANISEGSVTSVGSVDPARDFRALIKQKTLPFG
EVCQQLTHRIEQLLSNKNTHYYMKSITCIQAFREESVKQGNADLFNSYLQSLKRSIPSRA
LEVFWDLLVQDAVTLISEDEVEGSAVSKSEASQFLLTEEKKEQVASEPVEDTGDVDDLLD
MM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcaaagtcagccctggttctctgcatggatgtgggcttctccatgtccaac
tcagcccctggtgaagagcctccttttgcacaggcgaaaaaagtcatccagaagtttgtc
cagcggcaggtttttgcagagaccaaggatgaactagctttggttttgtttggcacggat
tataccaaaaaccctttggcccgggatgggcaataccagaacatcacagtgcatcgtcat
cttatggtgccggactttgagctgctggaagagatcgaacatcagatccaccctgaaaat
cagcaggctgactggctggatgctcttgtagtttccatggatcttctcaagacagaaacc
caggggaaaaagtgtgatcgcttaaacattgttctcctgactgacctgagcactgaagcc
agttcagacaagctggatgtcataattgaaaacttgaaacaagctgaaatcaacatgcag
ttctttttgcctttcccagtggaggatgaagaagagggtgaaggagatggggacagaacg
ggttccggtgaccctggtaggggcaaaggtctctccagggaacagcgaagtggcctggaa
atgattaaaaacatcatgctgagtctggatgaggaggagggcctggaagaaatttacaca
ttcaggaatgctatggagcacttgtgtatgtttaaacgcattgagaggagacccatggcc
tggccctgtcagctcaccatcggtagctctctgtccatccgtatcgttggctacaaagca
gtgactgaggagaaactgaagaaaatgtggatcacagtcgatgctcaaaccaacaagaga
gatgatgtgaagagagagactgtttactgtctggatgacgacaatgagacagaggtgcag
aaggaagacattattcagggttttcggtacggaagtgatatcgtacctttctccaaagtg
gatcaggatcagatgaaatacaagcatgatgggaagtgctttgctgttctgggcttcact
aaaaagaacttggttcttcgccatcagttcatgggaacacagattgtcaagatatttcct
gcacgggatgatgagcatgcaggcgtggccatgtcggctctgatccgtggtctggatgag
ctcaacatggttgccattgtgcgttacgcctacgaccggcgcagcaatcctcaagtgggc
gctgcattcccgtgtatcaagcctgaatatgagtgcctgttatatgttcagctgcccttc
atggaagatctttatggaagagagtttacatttccttctcttgagaacaacaagaagatt
gctccatcagaaacgcagttgtcagccatcgactctcttatcgattcgatgatgcttgta
acagaagacgaagatttgctcaaacctcaccatcttcccaaccctgccttccagagacac
ttccagtgtctgcaccacagggctgtacaccctgactctcctcttccccccatggagccg
tggctggaggctgctctcgatcgccctgaggtcatccaggaacgctgccaagctccactg
gaggagataaagaagttgtttccactcaccgaagtggagaagaaaaagaagctgaagaca
agcgctcagatttttggcaaagactctgaggagccagatgccaagaaagcaaaagaagac
gaagcagaggatgagtataacctggcaaacatttccgaaggatctgttacttctgtggga
agcgtcgatccagcccgggacttccgcgctttgatcaaacagaaaactcttccgttcgga
gaagtctgtcagcagctgactcacaggatagagcagctgcttagcaacaagaacacgcac
tactacatgaaaagcatcacctgtatccaggctttcagagaggagtctgtaaagcagggg
aatgctgatctgttcaacagttaccttcagtccctgaaaaggagtattcccagcagagcc
ctcgaggtcttctgggacctgcttgttcaagacgctgtgactttgatcagcgaggacgag
gtagaaggaagcgccgtgtcgaaaagtgaagcttctcagtttcttttgactgaggaaaag
aaagaacaagttgcttctgaaccggtggaagacactggtgatgtggatgacttgctggac
atgatgtaa
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