Poeciliopsis prolifica (blackstripe livebearer): 129361273
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Entry
129361273 CDS
T09758
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1 isoform X1
KO
K10849
DNA excision repair protein ERCC-1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03420
Nucleotide excision repair
pprl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
129361273 (ercc1)
03460 Fanconi anemia pathway
129361273 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129361273 (ercc1)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
129361273 (ercc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
SoxE
Motif
Other DBs
NCBI-GeneID:
129361273
NCBI-ProteinID:
XP_054887996
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MKKRFHIDLDDSAFTKERTPPKPQFQPSSKGQQNTTAPATSTPVSVTKSSVQPLSYADYI
VQTKTTTAAAPQTDAPSKLVRAEGSGISSLQHGGSENGQDCVKGTEVQPEEVKRNDAKLE
TAAEDSSSLKSDPSVIQGPKPVGSGSSIIVSSRQRGNPILKFVRSVPWEFGDVVPDYVLG
QTTCALFLSLRYHNLNPNYIHDRLKQLGSTFTLRVLLVQVDVKDPHHALKELARICVMAD
CTLILAWSPEEAGRYLETYKSYEKKPADLLKEQVEKDYLSKVTDCLTTVKSINKTDAITL
LSTFSSVEGIINASKEDLVLCPGLGPQKAKRLYDVLHKPFLKSRTNNS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaggtttcacatcgacctggacgattctgctttcactaaagaaagaacaccg
ccaaagccgcagtttcagccttcatccaaaggacaacaaaacacaaccgctccagctacg
tctaccccagtatcagttacaaaatcatctgtgcagcccctctcctatgcagattacatt
gtccagactaaaactacaacagctgctgctccacagacagatgctccttctaaactggtc
agggccgaaggatctggaatcagcagtctgcagcatgggggctctgaaaatggtcaagac
tgtgttaaagggactgaagttcagcccgaggaggtgaaaaggaatgatgcaaaactcgag
actgctgctgaggatagcagcagtctgaagtcagatccaagtgtcatccagggtcccaaa
ccagtgggatctgggagcagcattattgtcagttctcgacagaggggtaatcccattcta
aagtttgtgaggagtgtgccctgggagtttggagatgttgttcctgattacgtcttggga
cagacaacttgtgctcttttcctcagccttaggtatcacaacctaaatccaaactacatc
catgaccgtttaaagcagcttggaagtacattcaccttacgtgtgttgctggttcaagtt
gatgtgaaagatcctcatcacgctttaaaggaactggctcgcatctgtgtcatggccgac
tgcactcttatcttggcttggagtccagaagaagcaggacgttaccttgaaacatacaag
tcatatgagaagaagccagcagatcttctgaaagagcaagttgaaaaagactatctgtca
aaggttacagattgcctgactactgtgaagtctataaacaaaaccgatgccataacttta
ctatccactttttcttctgtagagggaatcatcaatgcctctaaagaagacttggttctc
tgtccgggcctcggaccacaaaaggcgaaacgtctttatgatgtcctacataagcctttt
ctgaagtcaagaacaaacaacagctga
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