Poeciliopsis prolifica (blackstripe livebearer): 129361436
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Entry
129361436 CDS
T09758
Symbol
edc3
Name
(RefSeq) enhancer of mRNA-decapping protein 3
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129361436 (edc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129361436 (edc3)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129361436 (edc3)
mRNA degradation factors
5'-3' decay
Decapping complex
129361436 (edc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Edc3_linker
YjeF_N
FDF
LSM14
Motif
Other DBs
NCBI-GeneID:
129361436
NCBI-ProteinID:
XP_054888258
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MASDWLGSLVSLNCGPTLGVYQGEVSSVDQSSQTISLRQPFHNGVKCPVPEVTFSAIDIQ
ELKILDIRNFHARTASSAAAKGNTVPVAVPKGDPRSVEKLNSPQQCSKSYGERHLDAQGQ
PKGFRRRHNSWSSTSRGANQATPKKNGVKNGQMKNRDDECFGDGMDNGLDTDFDFEGNLA
LFDKAAVFSEIDTTERRNGARSRGTPQDQTPTRYRHDENILEAKPIVYRQIIVPQPEHKE
YCTDSGLVVPSISYELHKRLLSAAERHGLTLERRLEMTGVCASQMTLTLLGGPNRFTPKN
LHQRPTVALLCGPHVQGAQGISCGRHLANHEVEVILFLPNFVKMLDAVTSELTLFNKTGG
KQVSSIKDLPDTPVDLIINCLDCHENTFLMDQPWYRAAADWANQNRAPVLSLDPPVSGQG
HAVEAKWSLSLCLPLPLAEAAGRVYLCDIGVPRQVFQEVGIKYHSPFGCKFVIPLHSA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggactggttgggtagtttggtgtctcttaattgtggaccaacgctgggagtt
tatcaaggagaagtgtcatctgtggaccagtccagtcagaccatctccttacgacaacct
ttccacaatggggtcaaatgtcccgttcccgaggtcacattcagtgccattgatatacag
gaactaaaaattttggacatcagaaactttcatgccaggacagcttccagtgcggctgca
aagggaaacactgtcccagttgccgttccaaagggggatcccagatctgtggagaagctg
aactctccacagcagtgctctaaaagttatggagaacgtcacctggatgcacagggtcaa
ccgaaaggctttcgtcgaagacataactcctggtcgtccaccagtcgaggggcaaatcaa
gcgacgccgaaaaagaatggagtgaaaaacgggcagatgaaaaacagagacgacgagtgc
ttcggcgacggcatggataacgggctggatacggattttgattttgaaggaaacctggca
ctgttcgacaaagctgcagttttctcagagattgacacgacagagcgacgtaacggcgcg
aggtcacgtggcacgcctcaggatcagacgcccacacggtaccgccacgacgagaacatc
ctggaggccaaaccgattgtttatagacagattattgtaccacagcctgagcacaaagag
tattgcactgactctggacttgttgttccgagtatttcttatgagctccacaagcgtctg
ttgtctgctgccgagcgccacggcctgacgctggagcggagactggagatgactggagtg
tgtgccagccagatgacactcacgttgttaggagggcccaacagatttacacccaaaaac
ctccatcagcggcccacggtggcgctgctgtgtgggcctcatgttcagggagcgcagggc
atcagctgcggccgccacctggccaaccacgaagtcgaggtcatactgtttctgcccaac
ttcgtcaagatgctcgacgccgtgacaagcgagctgacgcttttcaacaagaccggcggc
aaacaggtgtccagcatcaaagatctcccggacaccccggtggatctaatcataaactgt
ctggactgccacgagaacacattcctgatggaccagccttggtaccgggcggctgcggac
tgggccaaccagaacagagcgccggtgctcagcctggacccccctgtaagcggacagggc
catgcagtcgaggccaagtggtcgctgtcgctctgcctgccccttcctctggccgaagcc
gccggcagagtttacctgtgcgacatcggtgttcctcggcaggtgttccaggaagtggga
atcaagtaccactctccgttcggttgcaaatttgtcatccccctacactccgcttaa
DBGET
integrated database retrieval system
