Poeciliopsis prolifica (blackstripe livebearer): 129361461
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Entry
129361461 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-V-like
KO
K06487
integrin alpha V
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04081
Hormone signaling
pprl04145
Phagosome
pprl04148
Efferocytosis
pprl04510
Focal adhesion
pprl04512
ECM-receptor interaction
pprl04514
Cell adhesion molecule (CAM) interaction
pprl04518
Integrin signaling
pprl04810
Regulation of actin cytoskeleton
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
129361461
04512 ECM-receptor interaction
129361461
04514 Cell adhesion molecule (CAM) interaction
129361461
04518 Integrin signaling
129361461
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129361461
04148 Efferocytosis
129361461
09144 Cellular community - eukaryotes
04510 Focal adhesion
129361461
09142 Cell motility
04820 Cytoskeleton in muscle cells
129361461
04810 Regulation of actin cytoskeleton
129361461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129361461
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprl04147
]
129361461
04515 Cell adhesion molecules [BR:
pprl04515
]
129361461
04090 CD molecules [BR:
pprl04090
]
129361461
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
129361461
Exosome [BR:
pprl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129361461
Exosomal proteins of epithelial cells
129361461
Cell adhesion molecules [BR:
pprl04515
]
Integrins
Integrin alpha subunits
129361461
CD molecules [BR:
pprl04090
]
Proteins
129361461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
129361461
NCBI-ProteinID:
XP_054888294
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAGARTAVVGLLALLCASVHRGVAFNLDVDKPFVYTGPQGSYFGFSVDFFKSATNQNSDV
LIGAPRANTSSSSTVVERGAVYSCPWKNSASCRQLLFDDKDNRFKDGNQIEFKSKQWFGA
SVRSDGEHILACAPLYQWSTFGFSEREPVGTCYLKKGDTVVEYSPCRSSSHTPEGQGFCQ
AGFSADFLKQSNRVVVGGPGSFYWQGQLISDRVDEIINRFNNDYITPYGNTLSTKSAGAQ
YDDSYLGYSVTVGDFNEDGKEDYVTGVPRGDKALGYVNIFNGANMESMINFTGSQMAAYF
GYSVAASDVNSDGFVDVLIGAPLFMDRGSDGKLREVGQVSVYLSRGGFSFQPPQLLTGAE
VYARYGSAIAALGDLDRDGYKDVAISAPYGGPDHNGLVYIHNGQASGIDSTASQVLQGKW
ASSYMPASFGYSMTGSTDIDQNGYPDLVVGAFGADKAVLYRARPVISVNATLDISPQIIN
PEEKSCTIPQTNTQVSCFKVKYCLAAGGFGAPSSLSFRVDLTLDRLKQKEATKRALFLHS
ATYXYSKNMTVNSNRRLACEEQEVYLRDDREFRDKITPISVAMEYSLDYQLAADQTGLLP
IVNIWAPTNVTKQAHILLDCGEDNICKPDLKLSVKSDRXKIYIGDDNALTLMVTAENKGE
GAYEAELHVYPPQQADFTGVVRSQTLSRLSCAYKKENETKXVVCDLGNPMKKDTTILAEL
GFSVHQLSEEDTSIKFDLQIVSSNQFQNRSPRVSSVTQLDILAKASIRGSSSPSQVLLPI
ANWKPKNPPVLGDDIGPQILHVYELLNNGPSTFSKASLEVEWPYHFRNGSLLYITSFETE
GPINCTTDVEINPLNVSVSAGTQKNTSVVRDREMEGGNPRRVRKRDLEARETQNDLQILN
CNTAECLKLRCQVGRLERNKNAILFIYSRLDVNNFLRTENQNRSYVVRSTASFEVIEMPY
KNLRTELPANSTTVSVSVTWVADSAQPVPGWVVALAVLAGLLLLALLIFIMYKLGFFKRV
RPPQVDCTEKEQLQPEENGNTDA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggccggggctcggacagctgtcgtcgggctgctcgcgctgctgtgcgcgagcgtccac
cgcggcgtcgccttcaacctggacgtggacaaacccttcgtctacaccggaccccagggg
agctacttcgggttctcggtggacttctttaaatccgccaccaaccaaaactccgacgtt
ctcatcggagcgccccgggccaacacatcgtccagcagcaccgtggtggagaggggagct
gtgtacagttgtccctggaagaactccgccagctgccggcagctgctgttcgacgacaaa
gataaccgatttaaagatgggaatcagatcgagtttaagtccaagcagtggtttggtgcc
tcagtgcgatctgacggagaacacatcctggcctgcgctcccctctaccagtggtccact
ttcggcttcagcgagagggagcctgtggggacgtgttacctgaagaaaggagacacagtg
gtggaatactcaccctgcagatccagttcccacactccagaaggacagggtttctgccag
gctggcttcagtgcagactttcttaagcaaagtaacagagttgtggtgggaggaccgggc
agcttctactggcagggccagttgatttcagaccgcgtcgacgagattataaatcgcttc
aacaacgactacatcacgccgtacggaaacacactttccaccaaatcagccggtgcccag
tatgacgacagctacctcggatactctgtgacagtcggggatttcaacgaggatgggaag
gaagattatgtgactggagtaccgaggggggacaaggcactgggttatgtgaacatcttc
aatggggccaacatggagtccatgattaacttcaccggctcgcagatggctgcctacttt
ggatattcagtggctgcctctgatgttaacagcgacgggtttgtggacgtgctgatcgga
gctcccctcttcatggaccgaggctcggatgggaaactgagggaggtgggacaggtgtcc
gtttacctgagccgaggcggcttctccttccagccgccgcagctgctgaccggagcggag
gtttacgccagatacggctcggccatcgcagcgctgggggacctggacagggacgggtac
aaagacgtggccatctctgctccctacggaggtccggaccacaacggcctggtctacatc
cacaacggccaggcctcggggatcgactccacagcctctcaggtcctgcagggtaaatgg
gcgtccagctacatgcctgctagctttggctattccatgacaggaagtacagacatagac
cagaacggatatcctgatttggtagttggagcgtttggagcggacaaggctgttttatac
agagctcgtccagtgatcagtgtgaacgctacgttagacataagcccccagatcatcaac
ccagaggagaagagctgcaccattcctcaaaccaacacgcaggtgtcgtgttttaaagtg
aagtactgtctggcagccggcgggtttggagctccgtcctctctgagttttcgtgtggac
ctcacgctggaccgcctgaagcagaaggaggcgaccaaacgcgccctcttcctccacagt
gccacctatncgtattctaagaacatgacggtgaacagcaacagacggctggcctgcgag
gagcaggaagtctatttaagggacgaccgcgagtttcgggataagatcactcccatctcc
gtggcgatggagtacagtctggactaccagctggctgcagatcagaccggactgctgccc
atcgtcaacatctgggcaccaactaacgtcaccaagcaggctcacattctgctggactgt
ggcgaagacaacatctgcaaacccgacctcaagctgtcggtgaagagcgaccggnngaag
atctacatcggcgacgacaacgccctcaccctgatggtcacggctgagaacaagggcgag
ggcgcctacgaggccgagctgcacgtctacccgcctcaacaggccgacttcaccggggtg
gtccgcagtcagactctctctcggctctcctgtgcttacaagaaggagaacgagaccaag
nnggtggtgtgtgacctgggaaaccccatgaagaaagacactacgatcctggcggagttg
ggattcagtgtacaccagctgtctgaggaggacacctccatcaaattcgacctccagatt
gtcagctctaaccagtttcagaacaggagtccccgagtgtccagcgtcacgcagctggac
atcctggctaaagcctccatcagagggtcgtcgtctccctctcaggttctgctgcccatc
gccaactggaagcccaaaaaccccccggtgctcggagacgacatcgggccgcagattctt
cacgtttacgagctgctgaacaacgggcccagcacgttcagcaaggcgtcgctggaggtg
gaatggccgtatcacttcaggaacggctctctgctctacatcaccagctttgagaccgag
gggcccatcaactgcaccacggacgtggagatcaacccgctcaacgtctccgtaagcgct
gggacccagaagaacaccagcgtcgtcagggaccgagagatggagggaggaaacccgaga
cgtgtgaggaagagagacctggaggccagagagacgcaaaacgacttgcagatactgaac
tgcaacacagccgagtgtctgaagctgaggtgtcaggtcggccgtctggagaggaacaag
aacgccatcctgttcatctactccagactggatgtcaacaacttcctcaggactgagaat
cagaatcgctcctacgtggttcgatcgacggcgtcgtttgaagtcattgagatgccgtac
aagaacctgcggaccgagctgccggcgaactccaccaccgtcagcgtgtcggtgacgtgg
gtggcggactcggcccagccggtaccgggctgggtggtcgctctggcggtactcgcaggg
ctcctgctgctggctttgctcatcttcattatgtacaagctgggtttctttaagagagtg
cgccccccgcaggtggactgcaccgagaaggagcagctgcagccagaggagaacgggaac
actgacgcttag
DBGET
integrated database retrieval system
