Poeciliopsis prolifica (blackstripe livebearer): 129361484
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Entry
129361484 CDS
T09758
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129361484 (smarcal1)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129361484 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
DUF7480
ERCC3_RAD25_C
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
129361484
NCBI-ProteinID:
XP_054888329
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MSNQLTAEQQRKIEENRRKALERRAQRLGQQTSAGLNGASGQTDFPKQSENHRNPPLSVP
PRLVPPFKKDSQTSSYQIHRPNQQLLPGTSNQVNKISSRQTNQHLQSLGSSGGGSVGVKP
VQAISVTSQSAAGSFYKPPSIPAAQPPPKCTTSAAAKKAAISVRGKCVPHAEDRFKVEVG
YHAELIAIFKSIPSKNYDPATKTWNFSLDDYSKLMEQAAAIPSVSLRPLEGIGALASASS
RPCDGAALTALLKLCNGWQKPGARVQGQCILVSQTRFEVDIPYHADVIAVFKEMPTKNYD
MKSRKWSFSLEDYKRLMDLLSGMAGVEVEPLPRAIIQSFAARFNGTVAKTSDVPEADLSS
IDPTLTSSLMPFQKEGVNFAVSKQGRLLLADDMGLGKTVQAICIAAYYRNEWPLLVVTPS
SVRFTWAEAFRRWLPSLSPNSINVVVKAKENMRSGLVNIVSYDLLSRMDKQHSGPPFNVL
IMDESHFLKNIKTARCKAALPLLKAAKRVILLSGTPVMSRPCELYTQILAVRPSLFPRFH
EFGVRYCDARQHQQKNWGWDYSGSSNLGELKLLLEECLMLRRLKSDVLSQLPSKQRKVVT
VTIDGVSGSMKAALSAAAKQLTKNHRNKMEEKEALLIFYNHTAEAKLQAIMEYITDMLEC
GREKFLVFAHHKLVLDHITTELLKKNVSFIRIDGATPSAERQQLCEKFQFSSKSCVAVLS
VTAANMGLTLHSADLVIFAELFWNPGVLIQAEDRVHRIGQTSNVDIHYLVAKGTADDHLW
PMIQAKMNVLKEVGLSESNLLDKAENESFHLKDPNQKSIMEMFQRSFSEEDDFDEAILME
AANNWKDAPPEAAPSPHCTGTSFSKDPNKKTMKDFFTR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccagctgactgcagagcagcagcggaaaattgaggagaacagacggaaagct
ttggagcgaagagcccaaagactcggacagcagacttccgcgggacttaatggtgcttca
gggcagacagatttccccaagcagagcgaaaatcacagaaatcctcctttgtctgtacca
ccacggttggtcccaccttttaaaaaagactcacagacaagcagttatcagatccacaga
ccaaaccaacagctgctacctggtaccagtaatcaagtcaacaaaatctcctccagacag
acaaatcagcacttgcaaagccttgggtcatctggtggaggaagtgttggagtgaagcca
gttcaggccatttctgtcacatctcaaagtgcagctggttcattctacaagccacccagc
atacctgcagcacagcctcctccaaagtgcaccacatcggctgctgcaaagaaggctgca
atctctgtgagagggaagtgtgtgcctcatgcagaggatcgtttcaaggtggaagtgggc
tatcatgcagagcttattgccatttttaagtccatcccttccaagaactatgatcctgcc
acaaaaacatggaacttcagtctggatgactactcaaagctgatggaacaggcagctgcc
attccctcggtttctctgagaccgctggagggaatcggagctttggcctcggcgtccagc
cgaccctgtgacggtgcagcactgacggcgctgctgaagctgtgtaatggctggcagaaa
cccggcgccagagtgcaagggcagtgcatcctggtgtcacagacaaggtttgaggttgac
atcccttaccatgctgatgtcatcgcagtgtttaaggagatgccaacaaagaactatgac
atgaagtcacgaaagtggagcttttcacttgaggactacaagagactgatggatctgctc
agtgggatggcaggagtggaggtggagcctcttcccagggcaataatccagtcgttcgct
gccaggtttaacgggaccgtcgccaagacttcagacgtccctgaggcggacctctcaagc
atcgaccccaccctcacctccagcctcatgcccttccagaaggagggagtcaactttgcg
gtgtctaagcaaggccgcctcctcctggctgatgacatggggttgggaaagacagtgcag
gccatctgtatagcggcctactacaggaacgagtggcccttattggtggtgacgccttca
tctgttcgattcacttgggctgaggccttcaggcgctggcttccctccctgagtcccaac
agcatcaacgtggtggtaaaggccaaagaaaacatgagatctggcttggttaacattgtc
agctatgacctgttgagcaggatggacaagcagcactcaggtcctccctttaacgttctc
attatggatgagtctcacttcctgaagaacataaagacggctcgttgcaaagccgcttta
cctctgctgaaggcggcgaagagagtgatccttctgtcagggacccccgtgatgtccaga
ccttgtgagctctacactcagattctggctgtcagaccctcacttttccctcgcttccat
gagtttggggtgcgctactgtgatgcccgacagcaccagcagaagaactggggctgggac
tactcaggctcctctaatctgggagagctaaagctgttgttggaggagtgtctgatgctg
cgccgcctcaagtctgatgtcctgtcccagctcccgtccaagcagcgcaaggtggtcaca
gtaaccatagacggtgtcagcggcagtatgaaagctgccctctcggctgcagccaaacag
ctgaccaaaaatcatcgcaataaaatggaagagaaggaggctttgctcatcttctacaac
catacagctgaagccaagctgcaggccattatggaatatatcacagacatgctggagtgt
ggcagggagaagtttctcgtgtttgcccaccacaaattagtcctggatcacatcaccacc
gaactgcttaaaaagaacgtcagcttcattcgcatcgatggggcgactccttcagcagag
cggcagcagctgtgtgaaaagtttcagttttcctccaagtcctgcgtggctgtgttgtcc
gtcactgcagctaacatgggtcttacgctgcactctgcagatctggtgatctttgctgag
cttttctggaacccaggggttctcattcaggcagaggacagggttcatcgtattggacag
actagcaatgtcgacattcattacctggttgccaaaggaactgctgatgatcatctgtgg
ccaatgattcaggctaaaatgaatgtgttgaaagaggtgggtctgtctgaatccaacctt
ttggacaaagctgagaatgaaagcttccacttaaaggacccgaatcagaagagcatcatg
gagatgttccagagatctttctctgaggaagacgactttgatgaggccatcctaatggag
gctgcaaacaactggaaggacgcgccaccagaagcggcgccttctccacactgcactggc
actagttttagcaaagatcccaacaaaaagacaatgaaagatttcttcaccagatga
DBGET
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