Poeciliopsis prolifica (blackstripe livebearer): 129361500
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Entry
129361500 CDS
T09758
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129361500 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pprl04050
]
129361500 (edar)
Cytokine receptors [BR:
pprl04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
129361500 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
129361500
NCBI-ProteinID:
XP_054888354
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MSQSRGQKKFVFLSLILVSRLFVSAEYSSCGEYEFFNQTSNSCQACPQCQPGQEPHMNCG
YGMKDEDFACIPCAQGKYSKGKYEICRRHKDCDALYKATVRVAGTAESDAECGPCLPGYY
MLDNKPRNAYGMVCHSCQNAPSNTKECMQINKPKEKPPINPGSTTVFPHRIKESPGQGHL
ATALIIAMSTIFIMAIAIVLIIMFYILKAKPGGHACCSGQVVKAVEAQTIKQDDKKDVPD
NVVIFSEKDEYDKLKAAPQKTVKSENDASSENEQLLSRSIDSDEEPSSDKQGSVESASPN
PNLCLVDLGNKPDLSLLSLGLLDRGRTSNGAPIVAASHTINIQSPNHINSVNHIASSNHI
SSMNGINNNKTPGMLQSRRKKILELYARTCNVTEGLSPTELPFDCLEKASRMLSSSYSSE
AAVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESL
CVDVLGTSEVVAVAGRQSVNSFHSQLVCPSQCTSPSQRCASV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagagcagaggtcagaagaagttcgtcttcctgtcgttaatattggtgtctcgt
ctgtttgtgagtgccgagtactccagctgcggagagtacgagttcttcaaccagaccagc
aacagctgccaggcctgtcctcagtgccagccagggcaagaaccgcatatgaactgtggt
tacggtatgaaggatgaggactttgcctgcataccgtgcgcacaggggaaatactccaaa
ggaaagtacgagatctgcaggcgccacaaggactgcgatgctctctacaaagccactgtc
cgtgtcgcaggaactgctgaaagtgacgctgaatgtgggccatgtttaccagggtattat
atgttggacaacaaacccaggaacgcatatgggatggtttgccattcctgccaaaatgcg
ccgagcaacacaaaagaatgcatgcaaatcaacaaacccaaagaaaaaccaccaattaac
cctgggagcactacagtcttccctcaccgaattaaagaatcacctggacagggccattta
gccacagcgcttattattgccatgtcaaccattttcatcatggctattgccatcgttctc
atcatcatgttttatatcctgaaggccaagccgggtggccacgcatgttgttctggccag
gttgtaaaagctgtggaggctcaaaccatcaaacaggatgacaagaaagatgtccctgat
aatgtagtgattttctctgagaaagatgagtatgacaaattgaaagcagctcctcagaag
acggtgaaaagtgaaaatgatgcatcatctgagaatgagcagttgttgagccgcagcatc
gacagcgatgaggagccgtcatctgacaagcagggatctgtcgagagcgcgtcccccaac
cccaacttgtgcctcgtggacctgggcaacaaacctgacctctctctgctctctttggga
ctcctggaccgcggccgcacatccaatggtgcccccatagttgcagccagccacaccatt
aacatccagagtcccaaccacatcaacagtgtcaaccacattgcctccagcaaccacatc
agcagcatgaacgggatcaacaacaataaaaccccagggatgctacagagtcgaaggaaa
aagatactagaactgtatgctagaacctgcaatgttaccgagggcctaagccctacagag
cttcccttcgactgcctggagaaggccagccgcatgctgagttcctcctacagcagcgag
gcggctgtggtgaagacatggaggcacctggcagagagtttcggcctgaagcgagatgag
attggcggcatgagcgacggcctacagctctttgaaagagtgagcacggcaggctacagc
atccctgacctcctcactcggctggtgcagatcgagaggctggacgctgtggagtcactg
tgtgtggatgtgctgggaaccagcgaggtggtggcagtggctggacgacagagtgtcaac
agctttcacagccagttggtgtgtccatcccagtgcacctctccctcccagcgctgtgca
agtgtctga
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