Poeciliopsis prolifica (blackstripe livebearer): 129361509
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Entry
129361509 CDS
T09758
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129361509 (sox21b)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129361509 (sox21b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129361509
NCBI-ProteinID:
XP_054888369
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVSGLSAGALSDSV
IGNPDKAAAAAAAAAARVFFNPSMSANPYSFFDLGSKMTELSPPSFPYASPLGYPPGGAA
AFTGTGGVGGGTHTHTHSHPSPGNPGYMIPCNCTAWPSAGLQPPLAYILLPGMGKPQLEP
YPAYAAAL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtcaaacgcccgatgaacgctttcatggtctggtccaga
gcccagcgcaggaaaatggctcaggagaacccgaagatgcacaactccgagatcagtaag
cggctgggagcggagtggaaacttctcacggagtccgagaagaggccgttcatcgacgaa
gccaagcggctcagggcgatgcacatgaaggagcatccagactacaagtacaggccgagg
cggaagcccaagactttgatgaaaaaagataagttttccttcccggtgccctataatctt
ggggagcacgacgcgctcaaagttagcggactttccgcaggagcgctctccgactccgtc
atcgggaacccggacaaggctgcggcggcagcggcggccgcggctgcgagagtcttcttc
aacccgtccatgtcagcgaacccgtactcgttttttgacctgggatccaagatgaccgag
ctttccccgccttcctttccttacgcctctcctttgggttacccgccgggaggggcggcg
gcgtttaccgggactggcggcgtgggcggtgggacgcacacccacacccactcgcacccg
tcgccgggtaacccggggtacatgatcccgtgtaactgtacggcctggccctcggcggga
ctccagccgcccttagcctacatcttgctgcctgggatggggaaacctcagcttgaacct
taccctgcatatgctgcggcgttatga
DBGET
integrated database retrieval system
