KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129361654
Entry
129361654         CDS       T09758                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129361654 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprl03019]
    129361654 (exosc4)
Messenger RNA biogenesis [BR:pprl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     129361654 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     129361654 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 129361654
NCBI-ProteinID: XP_054888611
LinkDB
Position
Unknown
AA seq 245 aa
MAGLELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSRALHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLFPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALVQMDARLHQDHLETLIEAAMTACKCVSKVLDEVVRQHLQETS
VLSRE
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcgggcttggagctgctctctgatcaaggataccgcctggatggaaggaaagccacc
gaactacgaaaagttcaggcccgtatgggagtgtttgcccaggctgacgggtctgcttat
ttagagcaaggaaacaccaaggctctggctgtggtctacggtccgcacgagatgcggggc
tccagaagtcgggctcttcacgatcgagctgttatcaattgccagtacagcatggccacg
ttcagcacagctgagaggaagaggagaccacacggagatcgcaaatccaccgagatgagt
ctccacctgaagcagacgtttgaagctgctgtgatgacccagcttttcccacgctctcag
atagacatctatgtgaagattctacagtcagatggagggaactacagtgtatgtgtgaat
gccgccacattggcagtcattgatgcaggcatccccatgagagactatgtctgcgcctgc
accgtaggttttgtcgacgagactccccttgccgacctttgctatgctgaggagagcgga
ggagtgagttctctggctttggcgctgctgccccgaggaggacagattgctctcgttcag
atggatgctcgacttcatcaggaccacctggaaactctgattgaagccgcaatgactgct
tgtaaatgtgtgagcaaggtgttggacgaggtggtgaggcagcaccttcaagaaacgtcg
gtgctctccagagagtaa

DBGET integrated database retrieval system