Poeciliopsis prolifica (blackstripe livebearer): 129361656
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Entry
129361656 CDS
T09758
Symbol
tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04510
Focal adhesion
pprl04512
ECM-receptor interaction
pprl04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129361656 (tnr)
04518 Integrin signaling
129361656 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129361656 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pprl00536
]
129361656 (tnr)
Glycosaminoglycan binding proteins [BR:
pprl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129361656 (tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF_Tenascin
EGF_2
FN3_Tor_3rd
Fn3_Dep-1_2nd
Fn3_VIN3
Interfer-bind
DUF4998
Fn3_R-PTP-O
DUF7949
Motif
Other DBs
NCBI-GeneID:
129361656
NCBI-ProteinID:
XP_054888619
LinkDB
All DBs
Position
Unknown
AA seq
1380 aa
AA seq
DB search
MPESKQLHWTTELTTMLALALLFALQGAAHAAPSGDNKLVRTTRMRRQIPEGDRFPSASS
VNQSLREQPLVFNHVYNINVPMESLCSVDLDASVAPDSHAELGSRPPVEGPGEPSGPTEY
TEQTLDAESQVTFTHRINIPKAACSCPTIITIQQLATRVEMLEREVSMLRAQCGSGCCGE
GSAMGRLDFVPGCSGHGSFSFDLCGCICEEGWGGKNCSEPRCPNDCSGQGVCIEGECVCD
RDFGGDNCSEPRCPSDCSGRGLCIDGECMCEESFTGEDCMVGRCLNDCSDQGLCINGTCQ
CRPGYVGEDCSLVYCANNCSKKGVCKEGFCVCQDGFAGDDCNSVAPAMNLNARGVTDRTI
ELEWEGSIMVTDFLVTYTPSSPGGVQLEMRLPRNTTSWIITGLEAGIEYNINVFAVINNS
ISVPSSITVWTYLSNPDGLVFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDGGMTAQL
PSTITSFIQNGLRPGEEYTVNLVALREQGRSQPVTATFTTLIDGPTQLIVRDVSDTVAFV
EWTPPKAKIDQIVLRYGLARGEGPRTTFRLQPTLTQYSLQVLRPGSRYEVSVSGVRKGNE
SGSISTEFTTALSFFSEIDAPKNLRLVSKTSTTLELEWDNSEAEVEGYQVVYSTLAGDQY
DKVIVPRNEGATTKTNLTDLLPGTEYGIGISAMKGINQSTPATMNARTGLDVPMDLTVTA
STDNSITLVWGVVQGPIDHYRVTYTSSSGITTELTVPKDITTTTLTDLDPGTEYTITVAA
RRGRQQSTAATIDAFTGIRPVTHLYLSEGTSDSVLVAWSAPAPPADLFILSYSSADGTDT
SKVTLDGSKTRSLVQGLLPSTHYTFSLITIQGDVTSEPLTASLRTEMDPPKELAVSDVTE
DSVTISWIKPLAPFEYYKLSYQSARGRVDSEMIDSDVTNYTLSSLFPATEYEISLNAVRG
SQESRPVTTSVFTAMDMPAELTALNITPQGALLRWNPPLSNVDNYVLTITHNQLTADTFL
VEGNKHEHQLSNLKPSTTYSVALYATKGPLTSGTVITNLQTPMDAPVNLTASEVNHRSGL
ISWQPPIAEIDNYMLTYKTPDGSRKELILDAEDTWIRLEGLAESAEYTVKLQAARGLDTS
AVVSTTFTTGSRLFSTPQNCAQHLLNGETVSGVYTIYINRDPSQGVQVFCDMTTDEGGWI
VFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQKIASQGRYELRIDMRDGQESVY
ANYDKFSIGDARNLYKLRIGEYNGTAGDSFSYHQGRPFSTKDRDNDIAVTNCALSYKGAW
WYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPFNFRSISSKRRRSTAE
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgccagaatcaaagcaacttcattggaccacagagcttacaacaatgctggctcttgct
ctcctttttgcactacagggtgctgcacatgctgctccatcaggagacaacaagctggtt
cgaaccaccagaatgagaaggcagatcccagagggggataggtttccctctgcttcctca
gtcaaccagtcgctacgagagcagcctcttgtctttaaccacgtgtacaacattaacgtg
ccaatggagtctctgtgctccgttgacctggatgcatctgtggccccagattctcacgct
gagttgggatccagacctccagttgagggtccaggggagccatccgggccaacagaatac
acagagcagacgcttgatgcagagagtcaggtgacgtttacgcatcgcatcaacatacca
aaagcagcatgcagttgtcccacgataatcacaatccagcaacttgccaccagagtggag
atgctggagagggaggtgtccatgctcagagctcagtgtggatctggatgctgtggggaa
ggctctgccatgggccgtctggactttgtcccaggttgcagcggccatgggagcttcagc
tttgatctgtgtggctgcatctgcgaggaaggctggggcggcaaaaactgctccgagcct
cgttgcccaaatgactgctctggtcagggggtgtgcatcgaaggggagtgtgtgtgtgat
cgggactttggaggcgacaactgttcagagccacgatgcccctcagactgctcaggcagg
ggcctgtgtattgatggggaatgcatgtgcgaggagtccttcacaggcgaagattgcatg
gttggacggtgtctcaacgactgctcggatcaggggctgtgtatcaatgggacatgccag
tgccgccctggctatgtgggagaagactgttcattggtctactgcgccaacaactgtagc
aagaagggagtctgcaaggagggtttctgtgtctgccaggatggctttgctggagatgat
tgtaactcagtggcacctgccatgaatttaaatgcacgtggagttacagatcgtactatc
gagctggagtgggaagggtccattatggtgacagatttcttagtgacctacacccctagc
agccctggaggtgtgcagctagaaatgagactcccacgaaacacaacatcttggattatc
acaggtcttgaagcaggcatcgagtacaacatcaatgtgtttgctgtcatcaacaactca
atcagcgttccctccagtatcactgtttggacgtatctctccaatccagatggattagtc
ttcaagtctatcacagagacatcagtggaagtccaatggcaaccgttttactattccttt
gatggatgggagatcagcttcatccccaaggacaatgatggcggcatgacagcccagctg
cccagcaccatcacctcatttattcagaatggactgaggcccggggaggaatatacagtc
aacctggtggcgctcagagagcagggtcgaagccagcccgtcactgctacgttcacaacc
ttgattgatggtccgactcagctgattgtgcgtgatgtgtcagacactgtagcctttgtg
gagtggacaccaccaaaagcaaagatcgatcagattgtgttgcgttatggccttgcgaga
ggagagggcccacggaccaccttcagactccagcccacacttacccagtactcattacag
gttctgcgtcctggttcacggtacgaggtgtctgtaagcggagttaggaaaggaaatgaa
agcggctctatctctactgaatttacaaccgctttatcattcttctcagagatcgatgcc
cccaagaacttacggctcgtgtccaagacctctactaccctcgagcttgaatgggataac
agtgaggctgaggtggaggggtatcaggtggtgtacagcactttagcaggagatcagtat
gataaagtgattgtgccacgcaacgagggggccaccactaagactaatctcacagacctt
ctgccaggtacggagtacggcattggtatctctgccatgaagggcatcaaccagagtaca
ccagcaacgatgaatgccaggacaggcctggatgtacccatggatttaactgtgacagct
tccactgataactccatcactctggtgtggggtgtagtccagggtccaattgaccactat
agggtcacctacacatcttcctctggtatcacaactgagctgacagttcctaaagacata
accaccacaactctgacagaccttgaccctggaactgaatatacaatcacagtagcagca
agaagagggaggcagcagagcactgcagcaaccatagacgcctttacagggatcaggcct
gtaacccacctttacctgtcagaagggacatcagattcagtgttggtggcatggagtgcc
ccagcaccacccgctgacctcttcattctgagctacagctctgctgatgggacagacact
tctaaggtgacactcgatggctccaagacgaggtcactggtccagggcctgctgccatcc
actcactacacgttcagtttaatcacaatacaaggggatgttacctctgagccccttacg
gcatccctcaggacagaaatggacccaccaaaagaactggcagtctcagatgtgacagaa
gattcagtgaccatctcttggatcaaaccactggctccctttgaatattataagctctcc
taccagtcagccagaggtcgagtggacagcgagatgatagacagcgatgtgacaaactac
accttgtctagtctgtttcctgccaccgagtacgagatcagcctcaatgctgtcagaggg
agtcaagagagcagacctgtcaccacgtccgtcttcacagccatggacatgcctgcagaa
ttgacagccctcaacatcactccacaaggagccctgctgaggtggaaccctccgctatcc
aatgtggacaactatgtgctgaccatcacacataaccagctgacagcagacactttcctg
gttgaaggaaacaagcatgagcaccagttgtccaacctcaagccaagcaccacctactct
gtggccctgtatgccaccaaaggacccctgacaagtggcactgtgatcaccaaccttcag
acacccatggatgcacctgtgaacctgacagccagtgaagtgaaccatcgcagcggtctc
atttcctggcagccgccaatcgctgaaatagacaactacatgctcacttacaaaactcct
gatggcagccgtaaagagctgattcttgatgcagaggacacatggattcgactggaggga
ttggcggagagcgcagagtacacggttaagctccaggctgctagagggcttgataccagt
gctgtggtttccaccacctttactacagggagtcgtctgttttcaacacctcagaactgt
gcccaacacctgctgaacggggagactgtgagtggcgtctacaccatttacatcaacaga
gatccgagccaaggggtgcaggtgttctgtgacatgaccacggatgaaggaggctggatt
gtgtttcagcgtcgacaaaatggtctgactgacttttccaggaagtggagtgactatcga
gttggatttggaaatcttgaggacgagttttggcttggtcttgataacatccagaagatt
gcttctcagggacgctatgagctgagaattgacatgagggatggacaggaatcagtttat
gccaattatgacaaattttccattggagatgcaagaaacctctacaagctcaggatagga
gaatataatggcactgctggtgactcgttcagctaccaccagggccgtccattctcaact
aaagacagagacaatgacatcgctgtcactaactgtgccttgtcctacaaaggagcctgg
tggtacaagaattgccaccgggccaacctcaatggaaaatacggcgaatccagacacagt
cagggtattaactggtaccactggaaaggccacgagttttccattccctttgtggagatg
aagatgaggcccttcaactttcgcagtatcagcagtaagaggagacgatccaccgcagaa
taa
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integrated database retrieval system
