Poeciliopsis prolifica (blackstripe livebearer): 129361806
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Entry
129361806 CDS
T09758
Symbol
rnf220a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220a isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129361806 (rnf220a)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129361806 (rnf220a)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129361806 (rnf220a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
129361806
NCBI-ProteinID:
XP_054888892
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MDLHRAAFKMESSSYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSVEKDVHL
PFNNGSYTFASMYHRQGAVPPGFPNRDFPPSLLHLHHQFAPPNLDCSPISMLNHSGVGAF
RPFASPPEDRDGAPGGYQSAFTPAKRLKGCLDAEASPHLRYSDAEGKEYDFGGTQIPPGG
SPSSALKAVEDSGKKIFAVSGLLSDRETSSSPEDRIERCKKKMSLYDSQAPVCPICQVLL
RPGELQEHMETEIERLATICLSKNPSSKDGVATPGTPKSMLLSVHIKREGESPVVSPLSS
EDAHHSDRYQTFLRVRANRQTRLNARIGKMKRRKPEEGGQVCPLCSAPLAGSEEEMSRHV
EQCLIQREGALADEDSADMDGENGRGFDEYEWAGQKRIRATALLEGGFRGTGFATCSIKE
SAADSDADLDVDGDDTLEYGKAQYTEADIIPCSGAGEDQGEAREREALRGAVLNGGMPSN
RITPEFSKWANDEMPSTSNGESSKTDPSTPSSSSSSSSSSNAPRTCKNSEIEKVTEEEST
ATTMEALKARIRELEKQILRGDRYKCLICMRKPALKPGAEIKSIGVWSGSRPLANEVGER
QPKSLPLGLYCLYRGLVIGGYGSSIKRLLPQPLRRDSYTMPLTSIQCWHVHCEECWLRTL
GNKKLCPQCNTITSPGDLRRVYL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaccgggcagccttcaagatggagagctcctcctatctgccaaaccctctt
gcttctccagccctcatggtgttggcctctactgcagaagcttcccgtgatgcttcgatt
ccgtgccagcagcctcgcccctttggcgtcccggtctctgttgaaaaggatgtccatttg
ccattcaacaatggttcgtacacctttgcgtcgatgtatcaccgccaaggcgcggtccct
ccaggatttcccaacagggactttcctccgtccctcctccaccttcatcatcagttcgcc
ccgcccaacctggactgctcgcccatcagcatgctgaaccacagcggtgtgggcgccttc
aggccttttgcctcacctccggaagatcgggatggggcaccgggcggttatcaatctgcg
ttcaccccggcaaagcgcctcaagggctgcctggatgcggaggcttcgccccacctgcgt
tactctgatgctgaggggaaagagtatgactttggcggcacccagatccctccgggaggc
tcgcccagtagcgccttgaaagcagttgaggacagcgggaaaaagatcttcgccgtgtcc
ggcctcctgtcagaccgagagacttcctccagcccagaggaccgcattgaacgctgtaaa
aagaagatgtctctatatgacagccaggctcccgtttgtccaatttgccaagtgctgctg
aggcccggagagctgcaggagcacatggaaaccgaaatagagaggctagccacaatctgc
ctcagtaagaacccctcgtccaaggatggcgtagccactccaggaactcccaagtcgatg
cttttgtcagtgcacatcaagagagagggagagtctccggtggtgtcacccctgtcatct
gaagatgcccaccactccgacagatatcagacatttttacgagttcgggcaaacaggcaa
acgagattgaatgctcgtataggcaagatgaagaggaggaagcctgaggagggggggcag
gtatgtccgctgtgcagcgccccattggctgggagcgaggaggagatgagtagacatgtg
gaacaatgcctgatccagcgcgaaggggctctggccgacgaagactccgcagacatggac
ggcgagaacgggcggggcttcgatgagtacgaatgggcggggcagaaaaggatcagagct
acggccttactggagggaggcttcagaggaactggattcgccacatgcagtatcaaggag
agcgcggcagacagtgacgctgacctcgacgtggacggagacgacacgttggagtacggg
aaggcccagtacactgaagccgacatcatcccctgctctggagccggggaggaccaagga
gaagcccgggagagggaggcgctacgaggagctgtgctcaacggcgggatgccttccaac
agaataacacccgagttctccaagtgggcaaacgatgagatgccttcaacaagcaacggg
gagagcagcaagacagaccccagcactccttcatcatcatcctcctcctcctcctcctca
aatgctccacgtacctgtaaaaacagcgagatcgaaaaggtgacagaggaagaatcaaca
gctaccactatggaggctctgaaggcccgaatccgagagttggagaagcagatccttcgg
ggagaccgatacaagtgtctcatctgcatgagaaagcctgctctcaagccaggcgcagag
atcaagagcataggggtgtggtcgggctcccggccactggccaacgaggttggagagagg
caacctaagtccctccccctcggcctgtactgcctgtacaggggccttgtgattgggggc
tacggcagcagcataaagaggctcctcccacaacccctacggagggactcgtacacgatg
cctctaacgtccatccagtgctggcacgtccattgtgaagagtgctggctcaggactctg
gggaacaagaagctgtgcccacagtgcaataccatcacctcacctggagacctgaggcgt
gtctacttgtaa
DBGET
integrated database retrieval system
