Poeciliopsis prolifica (blackstripe livebearer): 129361858
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Entry
129361858 CDS
T09758
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129361858 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129361858 (prpf38b)
Spliceosome [BR:
pprl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129361858 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
129361858 (prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
129361858
NCBI-ProteinID:
XP_054888995
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MANVGNQLPTQAVSKPSSGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHIEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRALGFMYIRYTQPPTDLLDWYNDFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQQMKARPRKVAQKEPEEEAEFTESGRQGERRR
SRTPRRTPSPKRSPKRSRSRSHHRERDRHGPSFDRELERERDRQRKERDGGRDRERDRAD
RGDRERRRSRSADRNRERKRSLSGSRERRGERREKERDGAEDRGRKKDRDHHKDRGTERD
RSRDRKSRAENKEDERRHKEDRDRHREDRKAKRSSRSRSRERRHKGGAEEKSRKRDRSHS
RERERERDGERSHKRSRSKEKSRHQRESSNEHSKHAERRRSQSTE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgtcggaaaccaactaccaacgcaggccgttagcaagccttcatcaggaaaa
catggcaacgtattgcccctatggggaaacgaaaagactatgaacctaaatccaatgatt
cttacgaacgtgctctcctcgccgtatttcaaagttcagctgtatgaactaaagacctac
cacgaggttgtggacgaaatctatttcaaggtgactcacattgagccctgggaaaaggga
agcagaaagactgcaggccagaccggaatgtgcggaggggtgcgtggagttggcactggt
ggcattgtatcaactgctttctgtcttctgtacaaactgtttactctcaagctgacacgc
aaacaggtgatgggtctcatcactcacacagattctccgtacatcagggcacttggattc
atgtacataagatacactcagcctccaacagatttattagactggtataatgatttcctg
gatgatgaggaggagcttgacgtaaaagcaggtggcggctgtgtcatgaccattggggag
atgctgcgttccttcttgaccaaactggaatggttctccacgctgtttcccagaatcccc
gtgcccgttcaaaaggccatcgatcagcagatgaaggcgaggccgcgtaaggtggcccag
aaggagccggaggaggaggccgagttcacagagtcagggaggcaaggagaacgacgacgc
tccaggacgccaagacggacgccgagtcccaaaaggtctcccaagcgatcgagaagcagg
agccaccaccgtgagagagaccgccacgggccgagctttgaccgggagctggagcgcgag
cgggaccggcagaggaaggagagggacggggggcgggacagagagcgggacagggcagac
agaggggacagggaaagacggagatcacgtagcgcagacaggaacagagaacgcaaaaga
agtctcagtggcagcagagagcggagaggcgaacgcagggagaaagagagggacggggca
gaagacaggggtaggaagaaagacagggaccatcacaaggacagagggacggagagggac
aggtccagagataggaagagcagggcggagaataaagaagacgagcggaggcataaagaa
gacagggacagacacagggaggacagaaaagccaaacggtcgagtcggagcagaagcaga
gaaaggaggcataaaggcggagcggaggagaagagcaggaagagggaccgcagccacagc
agagagagggagcgcgagcgggacggcgagcgctctcacaaacgcagccgcagcaaagag
aagagtcgccaccagcgggagtccagtaacgagcacagtaaacacgctgaacggagaaga
agtcagagtacggagtaa
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