Poeciliopsis prolifica (blackstripe livebearer): 129361926
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Entry
129361926 CDS
T09758
Symbol
rb1cc1
Name
(RefSeq) LOW QUALITY PROTEIN: RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129361926 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprl01009
]
129361926 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129361926 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
pprl03029
]
129361926 (rb1cc1)
Protein phosphatases and associated proteins [BR:
pprl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129361926 (rb1cc1)
Membrane trafficking [BR:
pprl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
129361926 (rb1cc1)
Mitochondrial biogenesis [BR:
pprl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129361926 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
129361926
NCBI-ProteinID:
XP_054889137
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKNAIQAKYKIAVQHQVLVVNGGECMAADRRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLEDCTLSYQKLLMKFNTAYTNYQQ
DLEEIKIKLSKLGTSVSVMARIPLLECLTRHSYRESIEKSSSTPEKDSDETEEEKSTDSV
LCATQTQVASKSSVSLSASGTATCEPEGDQETSEMTESGGLRAALLEDDTPELACQSSFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTIAKLDNQNMKSIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VDALSTVPQMYCLAVVEVVRRKMFMRHYREWANALVKDGKRLYEAEKFKRESFGKLFRKS
FLRNRLFRGLESWPPTSFCTRKPRKFDDELPDISLDDLQYLKSCCPVEVQPFLMVPAMCD
FEPLNRHVETLHKLVQAAQSVDEMSQTITDLLSEQRASCSQRHPSPQSRASPXTTTPVPS
KTPLCLSLQGSTCQPLLVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSLDLDS
LAESPESDFMSAVNEFVIEENLTSPNPISDPTSPEMMVESLYSSVINAIDNKRMQDTTTL
EKENSRIADLKEVLEKYKCAAEESYSNLRSVKADLYYLRGFVLKEQQDFGLALRSMTMEV
RSTVNEIYQCHKMELSEQHEGELLTARQELEKQVQALTEENQVNQNIVRDVQRAMLELEG
LMERKEKELTQLENEKERWVGKERNFAEKIKNLEQINCDQTEEIKMLLTSKDSLSSQLEN
LHFEIERSQQKIRQELEAVSQCHLKELEEKLKQEHQKDLDSLNKNNKEALEHLAVENSTK
LTKAADHHDTAIKEKDVQIKEMEARLTELTELRCRLEVDLALKESEVEEVRILFEEAKMQ
QADAVKTQVEADTKVLKDELMELQRQLQAKNEEYEVDLAELRTLMRIEKDHCISELVDRH
EEQTILLHGKISALQQHSQDVERNHAEQQQRLREELDQQRAALVEDEEKQFRSFQEREQQ
LRTVINNLEAENDLLSKNLEQERRAAQEEEASNVVEANAFKELEQQKNEMERRLLEKIRQ
LENGLHEKRSSKSDEGLLLHAEGRADAGSPLSLDSALQERLQQERASLQAQIELLEKKKN
EEIQDLKTSLIAEQQTNFNTVLTREKLKKEQIINDLSEKLQQVTQQQEKDKALIETLSED
RASVMQEKKQLEEELNHLRSSALVSSAFFPSNSAQDLSEAGAAARALPVARACSPETSAE
TDRLASVTAFRDDETVDSAVEASMVASDDTVMSEEKQRIMLLERTLHMKEEENKRLSQRL
MSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLTALDL
KPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatgtgttccaggtcaacaatggaagcacattgacttttgacactgacctt
gctgtccaaactgtacttgagctcaaaaatgccatccaagccaaatataaaatcgcagtt
cagcatcaggtccttgttgtcaatgggggggaatgtatggctgcagacagacgggtctgc
agttacagtgctggcactgaaaccaaccccatatttctgttcaacaaagagatgatctta
tccgaccgggatccaaccatcccaaaaaccaccttctccattgagagtgagattcaggtt
aaggtggaagagtcgctattgatgccagctgtctttcacaccgttgcctcacgaacacaa
cttgctctggaaatgttcgaagttgccaaaaaactttgctcgttctgtgaacgtttggtt
cacgatgagcatctacaacatcaaggctgggcagctatcatggctaatctggaggactgc
actttgtcctatcagaagttactcatgaagttcaacacagcatacacaaattatcaacag
gacttggaagaaattaaaatcaaactttcaaagttagggacttcagtttctgtgatggcc
aggattcctctgcttgaatgtttgacaagacacagttacagagagagcatcgagaagtcc
agttcaaccccggagaaggattcagacgagacagaagaagaaaaatccacagactctgtg
ctctgcgctactcaaacccaggtggcctccaaatcgtcagtgtccttatctgcttcaggg
acagccacatgtgagccggagggagatcaggagacaagcgaaatgactgagagtggtggt
ttgagagctgcacttttagaagatgacaccccagaactcgcctgccagtcttctttcaac
gtaacactactggactggattaacgtgcaagacagacctaatgatgtggaatcggttgtc
aggaaatgctttgactccatcaacaggcttgaccctcggatcatccagcccttcctggca
gattgtcgtgacacaattgcaaagctagataatcagaacatgaaatccatcaaagggctt
gaagataggctgtacgctctagaccaaatgattgcaagctgtaagaagctggtgaatgag
cagaaagaactcgctcaggggtttttggccaatcagaaacgagctgaaaacctgaaggat
acatcagtcttgcctgacctgtgtctgagtcacaccaaccagctgatgatcatgctgaac
aaccacaggaagctgctagacataaaaaagaagtgcaccactgccaaacaagagctggca
aacaaccttcaagtcagactcaaatggtgctgctacgtgatgcttcacgcagatcaggat
ggggagaagcttcaggctcttcttcggctcctcacagagttaatagagagagtgagggtg
gtggatgccctcagtacagtgccccagatgtactgcttggcagtggtggaagtagtcaga
agaaaaatgtttatgcgacactacagagagtgggccaatgctcttgttaaggatgggaag
cgactgtatgaggcagaaaagttcaaaagggaatcctttggaaaactctttaggaagtct
tttctccgaaatcgattgtttcgaggacttgagtcttggcctccaacatcattttgtaca
cggaaacccagaaagtttgatgatgaacttccagacatctcacttgatgacctgcagtac
ttgaaatcgtgttgtcctgttgaggtgcagcctttcctaatggttcccgccatgtgtgac
tttgagcccctaaatcgccacgtagagacacttcataagcttgtccaagccgcacagagt
gtggacgaaatgtctcaaactatcacagatctgctgagtgaacaaagggcatcctgtagt
cagaggcatcctagtccccagtctagagcaagcccgnggaccaccacgccggtgccctcc
aaaacgcctctctgtcttagccttcagggatccacctgtcagcccctgcttgtacccgtc
cctgctcctttagaggacctgtccccagacagtatcgatgcacaaacctttgacttcgaa
accatcggccacccgaacatggaccctgtcttgcagcagggatccctggatttggattcc
ctcgccgaaagtcccgaatctgacttcatgtctgctgtcaacgagtttgtgatcgaggag
aacctgacctcccctaatcccatcagtgaccccactagccctgaaatgatggtggagtcg
ctttactcctcagtcattaatgccatagacaacaaacggatgcaggacaccacgacgcta
gagaaggaaaactcaaggattgccgacctcaaggaagttctggagaaatacaaatgtgct
gcagaagagtcctactccaacctaaggagtgtgaaagctgacctctattacttaagaggt
tttgtcttgaaggaacagcaggactttgggttagctctgcgcagcatgaccatggaagtg
cgcagtactgtgaacgaaatctaccagtgtcacaaaatggagttgagcgagcagcatgaa
ggagagcttctcaccgctcggcaggagctggagaagcaggttcaggcgttgacggaagaa
aaccaagtaaaccagaatattgtcagagatgtccaacgagcgatgctagagctggagggg
ctcatggagcgcaaagagaaagaacttacccagctggagaacgagaaagagcgatgggtg
gggaaagagagaaactttgctgaaaagataaaaaatcttgagcagatcaactgtgatcaa
acagaagaaatcaagatgctcctaacttcaaaagactctttgagcagtcagcttgaaaac
ctgcattttgagattgaacgcagtcagcagaaaatccgacaggagctggaggcggtttct
cagtgccatttaaaggagttggaggaaaaactgaagcaggaacaccaaaaggatctggat
agtctgaataagaacaacaaggaggctctggaacatcttgctgttgaaaatagcacaaag
ctaaccaaggcagcagatcaccacgataccgctatcaaagagaaggatgttcagattaaa
gaaatggaagctcggcttacggagctcacagaactccgctgtagactagaggtagacctg
gctctcaaagagtccgaggtagaggaggtgaggatcttatttgaagaagctaagatgcag
caggcggacgctgtaaagacccaagtggaggcagacaccaaagtccttaaagatgagctg
atggaactccagaggcagcttcaagctaagaacgaggagtatgaagtggatctggccgag
ctgaggactctcatgaggatcgaaaaggaccactgcatctcggagctggtggaccggcac
gaggagcagacgatcttgttgcacggcaaaatctccgccctgcagcaacactcccaggat
gtggagagaaaccacgcagagcagcagcagaggctcagagaggagttggatcagcagcgg
gcggctctggttgaagatgaagaaaaacagtttaggagtttccaggagcgggagcagcag
ttgaggacagttatcaacaatttggaggcagaaaatgatctgctctctaaaaacctagag
caggaaagacgtgcagctcaggaggaggaagcttcgaatgtcgtagaagcaaatgctttc
aaggagttagagcagcaaaagaatgagatggagagaagacttttagaaaagattaggcaa
cttgagaatgggcttcatgagaaacggtcatctaaaagtgatgaaggcttgttgttgcat
gctgagggccgtgcagatgctggatcacctctgtccctggactcagccttacaggagcgg
ctgcagcaggaaagggcctctctgcaggcccagattgagctcttggagaagaagaaaaat
gaagagatacaggacctcaaaacatcactgattgcagagcagcagacaaacttcaacact
gttcttacaagagagaagttgaagaaagagcagattatcaacgacctttcggaaaagtta
caacaagttacccagcagcaggaaaaagacaaagctctgatagagacgctgtctgaggac
cgagcgagtgtgatgcaggagaaaaagcagttggaggaagagctgaaccatctgcgcagc
tctgctctggtctcctcagccttcttcccctctaactcggctcaagatctctcagaagcc
ggagcagcagcaagggctctgcctgttgccagggcttgctctcctgagacctcggctgaa
acggaccgactggcgtccgtaacggccttcagagatgacgaaaccgtcgattcagctgtg
gaagccagcatggtggcttctgatgacaccgtgatgtcagaagagaaacagcggataatg
ttacttgagaggactttgcacatgaaggaggaagaaaacaagcgcctcagccagcgactg
atgtctcaaagcatgtcctccgtgtcatcacggcattcagacaaaattgccatcagagat
ttccaggtcggcgatttggttctgatcatcctggatgaaaggcacgacaactacgtgctc
ttcacagttgggcccaccctctacttcttacactcagagtctctcactgcactggacctt
aaaccagcatcagggacctcaagacgaccatgggtgcttggaaaagtgatggagaaggaa
tattgtcaggcaaagaaggctcagaacagattcaaagttcctttaggaaccaagttctac
agagtgaaagctgttccatggaataggaaagtctaa
DBGET
integrated database retrieval system
