Poeciliopsis prolifica (blackstripe livebearer): 129361959
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Entry
129361959 CDS
T09758
Symbol
rnf126
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129361959 (rnf126)
04121 Ubiquitin system [BR:
pprl04121
]
129361959 (rnf126)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129361959 (rnf126)
Membrane trafficking [BR:
pprl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129361959 (rnf126)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129361959 (rnf126)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
Zn_ribbon_19
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
DUF7560
FAR1_N
DUF8608
Motif
Other DBs
NCBI-GeneID:
129361959
NCBI-ProteinID:
XP_054889197
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MAEAPPRPCRFFCHRCSAEISPRLPDYTCPCCESGFIEELPEETSSSENGCASTSSASDQ
NRSSFENMDQHHLFTFPSGYGPFALGIFDENFDLRSRLSTEDNREAENRREREMASRQRY
SARQPRGRHVPRRQGSRHEGVPTLEGIIQQLVNGIIAPAAMPNTGMGPWGMLHSNPMDYA
WGANGLDAIITQLLNQFENTGPPPADKERIKSLPTISITQEHVGAGLECPVCKEDYSVDE
SVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPVLSGINFSPPSSSSSSS
PSSPSNENAGSNS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagcccctccacggccctgccggtttttttgtcaccggtgttcagcagaaatc
tcgccccgtctaccggactacacatgtccatgctgtgagtctggtttcattgaggaacta
cctgaagaaacaagcagttctgaaaatgggtgcgcgtccacgtcctctgccagtgatcag
aatcgctccagttttgagaacatggatcaacatcatttattcacatttccatcggggtac
ggcccatttgcccttgggattttcgacgaaaactttgaccttcgatcgagattatccaca
gaggacaaccgggaggcagagaacagacgagaaagggaaatggcttcacggcagcgatac
agtgcgaggcagccgcggggtcgacatgtgccacgccggcagggttcgcggcacgaagga
gtgcccacattggagggaatcatccagcagcttgttaatggaatcatagcacctgcagcc
atgccaaacaccgggatgggaccatggggcatgctgcattccaatccaatggactatgcc
tggggggctaatggactggatgctatcattacacagttattaaaccagtttgaaaacacc
ggtcctccgccagctgacaaagaaagaataaagagtttaccgaccatttccattacacaa
gaacacgttggtgctgggttagagtgtcctgtctgcaaagaagactacagtgttgacgag
agtgttaggcagctaccgtgcaatcatttgtttcacaatgattgtatagttccatggctg
gaacagcatgacacatgtcccgtgtgcaggaagagtcttagcggtcagaacacagccaca
gacccaccggtgttatcaggaatcaacttctctccaccttcctcctcatcctcttcctct
cccagctcacctagcaatgaaaatgcagggagcaactcatag
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