Poeciliopsis prolifica (blackstripe livebearer): 129362184
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Entry
129362184 CDS
T09758
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
pprl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129362184 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
129362184 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129362184 (thoc1)
03041 Spliceosome [BR:
pprl03041
]
129362184 (thoc1)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129362184 (thoc1)
Spliceosome [BR:
pprl03041
]
Complex C
Other components
EJC/TREX
129362184 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129362184 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
129362184
NCBI-ProteinID:
XP_054889559
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MSPPVFNFVDVKEKFTAAARQALSGKTCKHLITVFNQISGNETEKKTTLDQALRGVLGDQ
IIEQKMSCDDYLSLIYLSIDAVTEGICSATIPFVLLGDVLDCLPLDLCDKIFSFVEKNVS
TWKSSSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLDNITVFNKNEQESTLGQKQTDEKEDTMEVEEGEMGEDDAPAPCSIPIDYNLYRKFWTL
QDYFRNPLQCYDKFSWMTFLKFSDETLAVFKSFKLDDMQASKRKMEDLRASDGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLNDDQSAWIEETTKLV
YQLLSETPPEGEKFATMVEHILNTEENWNSWKNEGCPSFVKERTSDDKPKRPTRKRQAPE
DFLGKGPERKIFMGNDELTRLWNLNQDNMEACKSESREFMPSLDEFFAEAIEQADPVNMV
EEEYKVVRNPNYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDSMVSKLAKELPKDIPSE
EIKTGEEDDDDNGDNLLKDSNDSPSIQSKTVTNHQMDDIAAKLGSQWKTLASHLEMKAAE
MREIETDSEDVDVQAKLLLVAWQEREGSQATVENLATALSSAGFSQLAERLSEA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctcccgtattcaattttgtcgacgtaaaggagaaatttacggctgctgccaga
caggctctctcgggtaaaacctgcaaacatctaatcactgtgtttaaccagatctccgga
aatgagacagaaaagaagaccacacttgaccaggccctgcggggtgttctcggtgatcaa
attattgagcagaagatgagctgtgacgactatctgtctctcatctacctgagtattgat
gctgttactgagggaatctgctctgccacgattccattcgtcctgctgggagatgtgttg
gactgccttccccttgacctgtgcgacaaaatattctcctttgttgagaaaaatgtctcc
acctggaaatcaagctcattctacactgcaggaaagaactatctgctgagaatgtgcaac
gatcttctaaggaggctgtccaaatcccagaataccgtattctgtgggcgaatccagctt
ttcttggcacgactcttccctctatctgagaaatctggtctgaatctacagagtcagttt
aatctggacaacataacagtgttcaacaagaatgaacaggagagcactcttggccagaag
cagacagatgaaaaggaagacaccatggaggtggaggaaggtgaaatgggggaggatgac
gcacctgcgccctgttctatcccaattgattacaacctatacagaaagttctggacgttg
caggactacttcagaaatccgctgcagtgctacgacaaattctcatggatgacattcctt
aagttttcagatgagaccctcgcagtattcaagagcttcaagctggatgacatgcaggcc
tctaaaaggaagatggaggacctcagagcctctgatggcgaacatgtttattttgccaaa
tttctcacaagtgagaagctgatggacttgcagctcagcgacagcaacttcagacggcat
atactgctgcaatacctgatcctcttccagtacctgaagggacaggttaaatttaaaagc
tccagctgtgttctgaatgacgaccagagtgcatggattgaggagacgacaaagctagtt
tatcagctgctgagcgaaacgcctcctgaaggagaaaaatttgccaccatggtcgagcac
attctcaacacggaggaaaactggaattcctggaagaacgagggctgtccgagctttgtg
aaagaaagaacatctgatgacaaacctaaaaggcccaccaggaaaagacaagctccagag
gacttccttggaaaagggccagagcgcaagattttcatgggaaatgatgagttgactcga
ctgtggaacttgaaccaggacaacatggaggcctgcaagtctgaaagcagagagtttatg
ccatcactggatgaattctttgcggaggccattgagcaggccgatccagtcaacatggtg
gaggaggaatacaaggttgtgcgtaacccgaactacggttggcgagctttgaggctcctg
tccaggaggagtccacacttctttcagccaacgaaccagaagttcaaaagcttggcggac
tacctagatagcatggtcagcaaactggccaaagagctgccgaaggatatcccttcagaa
gaaatcaagacaggagaggaggatgatgacgataatggagacaatcttcttaaagacagc
aatgacagtccgagcatccagagtaaaactgtaacaaaccatcagatggatgacattgca
gccaaactggggtcccagtggaagacactagcctctcatctggagatgaaggcagcagag
atgcgggaaatcgagacggacagtgaagatgtggatgttcaggccaagctgctgctggtg
gcctggcaggagcgagaaggatcccaagcaacagtggagaacctggcaacggctctcagc
tcggcaggattctcccagcttgcagaacgcctcagtgaggcttga
DBGET
integrated database retrieval system
