Poeciliopsis prolifica (blackstripe livebearer): 129362213
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Entry
129362213 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04510
Focal adhesion
pprl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129362213
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129362213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Laminin_II
Motif
Other DBs
NCBI-GeneID:
129362213
NCBI-ProteinID:
XP_054889624
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MLQLRLAVLLALQVLTCSQEGGDSLGGAPDDLSLPEFRDVCTEGSCYPATGDLLIGRAHQ
LMSTSTCGLKRPEPFCIVSHLQEEKKCFVCDSAAPYDDELANHNHSHRIENVVTTFGPNR
LKTWWQSENGLENVTVQLNLEAEFHFTHLIMTFRTFRPAAMVIERSADYGKTWQVYRYFA
YDCESSFPSVSHGPMRKVDDVICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNL
LKITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASQCAPVEGAG
QTMEGMVHGHCMCNHNTKGLNCEQCEEFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFD
MAVFMASGNVSGGVCDDCRHNTTGHNCEQCKPFYYQHPEKDLRDPNICQPCNCDPVGSLN
GGICDGLTDVRVGLIAGQCRCKVNVEGERCEHCKPAYYGLSDEPEGCKACTCSPLGTAPG
GNPCDSETGSCFCKRLVTGRDCDQCVDEHWGLSNDMDGCRPCDCDLGGAVHNRCDQVSGQ
CVCRDHMFGRRCDQVESGFYFVALDHYTYEAEDAKFGPGVTMVPRPHPHDRSPTWTGVGL
VNVPEGXFLDFSVDNIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPGPITADSRCVNTVP
DDDNQMISLHPSSRYVVLPRAVCFESGLNYTIRLSLPLYSALSEVHSPYTLIDSIVLMPH
CKNLEIFTSSVGGDSSAWETFQRYRCLENSQSVIKTPMTDICRNFIFSISALLHQGAKEC
QCDPQGSLSTVCDPSGGQCQCRPNVAGRNCDRCSPATFQFGPSGCKECACDPQGSQSPIC
DQLSGQCVCVAGAYGRQCDRCLPGHWGFPTCRPCSCNGHAESCDAATGRCTTCRDHTTGH
SCDRCLDGYYGDPVLGSGDHCRPCLCPDGPNSLRQFAGSCYRSDTSEQVVCVCNPGFKGA
RCDQCSPGYYGNPDEAGGQCLPCQCHSNIDMLDPESCDARTGECLRCLHHSEGPSCQNCK
LGYYGNALVQDCRKCVCNQLGSDESSCQSSTDCHCDRSSGQCHCRPNVIGQHCDRCAPDT
WNMAGGAGCQSCDCNTEHSYGTTCNEISGQCSCHPGFGGRTCNECRELFWGDPEVQCHAC
DCDPRGTLEPQCNKVSGHCVCVEGVAGPRCDVCARGFHGTFPDCHRCHQCFSEWDGIIGQ
LTNQTHRLVNKVNSIKASGLSGPYRKSIESMERSAADIQSILDQDPASQPLTEVQNLLQQ
ASDLMAALSQTMNNTQETLDLVAEQDSGIKTQLDSVTSDAQKLERTVQELMDQVEFIKNS
DIRGATDSVTKYFLQSQAAEARANASTISAGSPVESSAALRQLTEDKMNQTREEFLERQS
EHAQKLDNLAGEMETLDLSVISYKTCGSPSSGQDSCWSSPCGGLGCVDPEGQPKCGGEGC
DGAVTAANSILLKTQEAEQEIISAMAEVEKLSNMVLEVKLQADEAKLSAQNVLMKTNRTK
RKVDQSNEELRSLIRQIKDFLTQDAADLESIELVANEVLAMQMPTTPAQLQNLTDEIRQK
VGELGNVEAILQQSADDIQRAESLLDQARQASKQATDTKDSVEKVKEALEEAQRAHTAAS
SAIQQAASDIQTTTKLLSSVETETADAESKLDNATQRLQRLEQDVKLLADRSANVTQRTE
LANQEAADIGRIAEEVKKEFESEVKQKYSTVEQLIDQKAGGVADAKKRAESLQNQAKQLL
LQASDKLQLLKDLEKSYDDNQRTLESKAEQLVEMEAAVKKLLQEISHKVTLYSTCLF
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagctgcggctcgcggtgctgctcgctctgcaggtactcacctgcagtcaggag
ggcggagactcgctgggcggggccccggatgacctcagcctcccagagtttagggatgtt
tgcaccgaaggcagctgttacccagcgacaggggatcttctgattggccgagctcaccag
ctgatgtccacctctacctgtggactgaagcgtccagaaccgttctgcattgtcagccac
ctgcaggaggagaagaagtgctttgtgtgtgactcagcagcaccatatgacgatgagctg
gccaatcacaaccacagccaccgaattgaaaacgtcgtcaccacatttggtcccaacagg
ctgaagacctggtggcagtccgagaacggtctggagaacgtcaccgtccagctgaacctc
gaagccgagtttcacttcactcatctcattatgaccttcaggacgtttcgaccagctgcc
atggtcattgagcgatcagcagactatggaaaaacctggcaggtttatcgctactttgcc
tacgattgcgagtcatcctttccttcagtttcccatggtccgatgcggaaggttgatgat
gtcatctgcgactctcgttactcggatatcgagccatccactgaaggcgaggtgatttac
agagtcctggacccagcatttcgtatcgaagacccttacagtccacggatccagaacttg
ttgaagatcaccaacctgcgggtcaagttcaccaagctgcacacactcggagacaacctg
ctggactctcggatggagatcaaggagaagtattactatgccatctatgacatggtggtc
agaggaaactgcttctgttatggacatgcgtctcaatgcgcccctgtcgagggagcaggc
cagaccatggagggcatggttcatggtcactgtatgtgcaaccacaacactaaaggactg
aactgtgaacagtgcgaagaattttaccacgacctgccctggagaccagccgaggggcgc
aacaccaatgcctgcaaaaagtgtaactgtaaccaacactcggactcatgccacttcgac
atggccgtgttcatggcctctggaaacgtcagcggaggggtttgcgacgactgtcggcac
aacacgaccggacacaactgtgagcagtgcaaaccgttttactatcaacatccggagaag
gacctcagagacccaaacatctgccagccctgtaactgcgaccccgtgggctccctgaac
ggaggaatatgcgacgggctgacggacgtccgagtcggtctgatcgctggtcagtgccgg
tgtaaagtcaacgtggagggggaacgctgcgaacactgcaaaccagcatactacgggctg
agcgatgaacctgaaggctgcaaagcgtgtacctgcagtcccctgggaacagctcctgga
ggaaacccgtgtgacagcgaaacaggaagctgtttctgcaaacgcctggtgaccgggcgc
gactgcgaccagtgtgtggacgaacactggggactcagtaacgacatggacggctgcaga
ccatgcgactgcgatctgggaggggccgtccacaaccggtgcgaccaggtgagcggtcag
tgtgtctgcagggatcacatgttcggccgtcgctgcgatcaagtggagtccgggttctac
tttgttgctctggatcactacacctacgaggctgaagatgccaagtttggacctggagtg
acgatggtgcccagaccccaccctcatgaccgcagtcccacctggacaggcgttggcctg
gtcaatgtccctgaagggnctttcctggatttctctgtggacaacatccctcattccatg
gagtatgacattcttatccgctatgagcctcagctgcctgaccaatgggaggaggttctg
atgacggtaatgaggcctggaccaattacagctgacagccgctgcgtcaacacggtgccg
gacgacgacaaccaaatgatctcccttcatcccagctcccggtatgtggttctgccgagg
gcggtttgttttgaatctgggttgaactacacgatccgcctcagtctcccgctctactcg
gccctcagtgaagtccattctccatacacgctcatcgactcgatcgtgttgatgccgcac
tgtaagaacctggaaatattcacctcctctgtgggaggggactcgagtgcctgggaaacg
tttcagcgttatcgatgtctggagaacagccagagtgtcattaaaaccccgatgactgac
atctgcaggaacttcatcttcagcatctctgccctgttgcaccagggagctaaagaatgc
cagtgtgacccccagggctccctcagcaccgtgtgtgaccccagcgggggccagtgtcag
tgtcgacccaacgtggccggcaggaactgtgacagatgctctccggccacgtttcagttt
ggaccgagcggctgcaaagagtgtgcatgcgaccctcagggctcccagagtccgatctgc
gatcagctgagcggtcagtgcgtctgcgtcgccggcgcctacggtcggcagtgcgaccgc
tgcctgccgggtcactggggcttcccgacctgccgaccctgctcctgcaacggacacgcg
gagagctgcgacgccgccaccggccgctgcaccacctgcagggatcacaccaccgggcac
agctgcgacaggtgtctggatggttactacggcgacccggttctgggctcaggtgaccac
tgtcgcccgtgtttgtgtcccgacggcccaaacagtttgcggcagtttgcggggagttgt
taccgtagcgacacctcggagcaggttgtgtgtgtttgcaacccaggattcaaaggtgct
cgctgtgatcagtgttcacctggctactatggaaaccccgacgaggcgggtggccagtgt
ctcccgtgccagtgccacagcaacatcgacatgctggacccggagtcctgtgacgccaga
accggcgagtgcctgcgctgtctgcaccacagcgagggtccgtcctgccagaactgcaaa
ctgggttactacggcaacgccttggttcaggactgcaggaagtgtgtctgtaatcagctg
ggcagcgacgagtccagctgccagtcctccaccgactgccactgcgaccgcagcagcggc
cagtgccactgcagacccaacgtgattggtcaacactgtgaccgctgtgcgcccgacacc
tggaacatggcgggcggcgccggctgtcagagctgcgactgcaacaccgagcattcgtac
gggaccacctgtaacgagatcagcggtcagtgctcctgccatcctggttttggaggaaga
acgtgtaacgagtgccgagagctgttctggggagaccctgaagtccagtgtcatgcatgc
gactgtgaccctcgcggcaccttggagccgcagtgcaacaaagtgagcggccactgcgtc
tgcgtggagggcgtggccgggcctcgctgcgacgtctgcgcccgcggcttccacgggacc
ttcccagactgccatcggtgccaccagtgtttctcagagtgggacggcatcatcggtcag
ctgaccaatcagacacaccgactggtcaacaaggtcaactccattaaagccagtggactc
agcggaccgtacaggaagtctatagagagcatggagagaagtgctgcagacattcagagc
atcttggaccaagatccggcctcgcagcctctgactgaggtccagaacctgctgcaacag
gccagcgacctgatggcagctttgagccagaccatgaacaacacccaggagactctggat
ctagtggctgagcaggactctggcattaaaacccaactggactctgtaacgtcggatgct
cagaaactggagcgaacggtacaggagctgatggaccaagtggagttcatcaagaactct
gacatcagaggagcaacagacagcgtcaccaagtacttcctgcagtctcaagcagccgag
gcgcgagcaaatgcctcaaccatcagcgccggcagcccagttgaatcttctgctgcccta
cggcagctcacagaagacaaaatgaaccaaaccagggaggagtttctggagagacagtct
gagcatgctcagaagctggacaacctggctggagagatggagactttggacctatcagta
atcagctataagacgtgtggcagtccatcttctggccaagactcctgctggtcttcgccc
tgcggaggactgggctgtgtggaccctgaaggtcagcccaaatgcggaggagaaggatgt
gatggtgcggtgacggcagccaacagcatcctgctgaagactcaggaggccgagcaggaa
atcatcagtgccatggcagaggtggagaagctctccaacatggtgttggaggtgaaactg
caggcagacgaggcgaagctcagcgcccagaatgtcctgatgaagaccaacagaaccaag
cgcaaggttgaccagagcaacgaggagctgcgaagcttgatcagacagatcaaagacttc
ctcacacaggacgctgcagacctggagagcatcgaactggtggcaaatgaagttctggcc
atgcagatgccgaccacaccggctcagctacagaacctaacggatgagatccgacagaag
gtgggagagctgggaaacgtggaggcaatcttacagcagagcgccgacgacattcagagg
gcagagagtctgctggaccaggcccgccaagccagtaagcaggcgacggatacaaaggac
tctgtagagaaagtgaaagaagctctggaagaagctcagagagctcacacagctgccagc
agcgccatccagcaggccgcctccgacatccagaccaccaccaagctgctctcctccgta
gagacggagacggcagatgcagagtcgaagctggacaacgccacccagaggctgcagagg
ctcgagcaggacgtgaagctgctcgccgatagatccgcaaacgtcactcagagaaccgaa
ctggccaatcaggaagccgcagacatcggaaggatcgcggaggaggtcaaaaaggagttt
gagtcggaggtgaagcagaagtacagcacagtagaacagctgatagatcagaaagcgggg
ggtgtggccgacgctaagaagagggcagagtcactgcagaaccaggccaaacagctgctg
ctgcaagccagcgacaagctgcagctactgaaagatctggaaaagtcgtacgatgacaat
cagcgaactcttgagtcgaaagctgaacagctggttgaaatggaggcagcagtgaagaag
ctgctgcaggaaatcagccataaggtcactctttacagcacctgcttgttttag
DBGET
integrated database retrieval system
