Poeciliopsis prolifica (blackstripe livebearer): 129362255
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Entry
129362255 CDS
T09758
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129362255 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprl04147
]
129362255 (copb2)
Membrane trafficking [BR:
pprl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
129362255 (copb2)
Exosome [BR:
pprl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129362255 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
129362255
NCBI-ProteinID:
XP_054889670
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWMCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEVQQANLKAMGEAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMAEKVAASQENNEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
KDGKNNVAFMTYFLQGKLDQCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLREAFAAEHYLRETCIGSSRPAKDYPLVTPNEDRNILEEA
QGYEPKETFVPFVPQTKESDESSSVPAASETPSQPKPATPKAAVDKEEEEEEKLTFAQSE
KEKTLDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacattaagaggaggctaacagcccgatcggaccgagtaaaaagt
gtagatcttcacccaaccgagccatggatgctggccagtctctacaacggcagcgtctgc
gtgtggaaccacgaaacgcagactctggtcaagacttttgaggtgtgtgacctgcctgtc
agagcgtccaagtttgtggccaggaagaactgggtcatcaccggagcagatgacatgcag
attcgtgtgtttaactacaacaccttggaaagggtccatatgtttgaggcccattctgac
tatatccgttgcattgctgttcatccaacccagccgtacatcctaaccagcagcgatgat
atgctgatcaagctgtgggactgggaaaagaagtggatgtgcagccaagtgtttgagggt
cacacacattatgttatgcagattgtcatcaaccccaaagacaacaaccagtttgccagt
gcctcattggacagaacgattaaggtttggcaactgggctcttcttctcccaacttcacc
ttggagggtcatgagaaaggagtgaactgcatcgactactacagcgggggagacaagccc
tacctgatttcaggtgcagatgaccgccaggtcaagatttgggattatcagaacaagacc
tgtgttcagactctagagggccacgctcagaatgtctcctgtgtcagcttccaccctgag
ctgcccataattatcacaggatccgaggatggtacggtgcgaatctggcattccagcaca
taccgcctggaaagcacactcaactatggcatggagcgagtgtggtgtgtgtgtggtctt
agaggctccaacaatgtggcactgggatatgacgaaggcagcatcatcatcaaagttggt
cgggaggagccagccatgtctatggacaccaatggaaagatcatctgggctaaacacagt
gaagtacagcaagccaacctgaaggccatgggggaagctgaaatcaaggatggggagaga
ctgccgctggctgtcaaagatatgggcagctgtgagatttaccctcaaactatccagcat
aacccgaatggacggtttgttgtggtatgtggcgatggggagtatatcatctataccgcg
atggcgctgaggaacaagagctttggttcagctcaagagtttgtctgggcccacgactca
tccgaatatgccatcagagaaagcaacagtattgtcaaaatcttcaaaaactttaaagaa
aagaaatcctttaaacccgactttggagcagaagggatctacgggggtttcttactcggg
gtgaggtctgtgaacggcctggcattttatgactgggagaacacggagctaattcgccgc
attgagatccagcccaagcacatcttttggtcagactccggtgagttggtctgcatcgct
acggaggaatccttcttcattctccgttacatggcagaaaaagttgctgcctctcaggaa
aacaatgagggcgtaacagaagatgggattgaagacgcctttgaggtcctgggagagatc
caggagattgtgaagactgggctttgggttggagactgtttcatctacaccagttctgta
aacagactcaactactatgtaggaggagagattgtgactattgcacatctggacaggacc
atgtacctgctgggttacatcccaaaggacgaccgtctttaccttggagacaaggagctc
aacattgtcagctactccctgctggtttctgtcctggagtatcaaactgctgtgatgaga
agagactttggaatggcagacaaggtgctgcctaccatccccaaagagcaacggaccagg
gttgcacatttcctggagaaacagggtttcaaacagcaggcactggcagtatctacagac
ccagagcacagatttgagttggctttacaactgggggagctgaagatcgcctatcagctg
gctgttgaagcagaatctgagcagaaatggaagcagctagctgagctggctatcagtaag
tgccagttcggcttggcccaggagtgcctgcaccatgctcaggattacggcggcctgctc
cttctcgccaccgcatcagggaacgccaccatggtgggcaagctggccgaaggggcagaa
aaggacggcaagaacaacgtggccttcatgacatatttccttcaggggaaactggatcag
tgtctggagcttctcatcaagactaacagactaccggaagcagcgtttctggcgcggaca
tacctgcccagccaggtgtcccgtgtggtcaaactgtggagggagagtttggctaaagtc
aaccagaaggctgctgaatcacttgcagaccccacagagtatgaaaatctgttccctggg
ctgagagaagcatttgcagctgaacattacctgagagagacctgcattggcagctctagg
cctgccaaagattacccacttgttacacccaatgaagacagaaatattctggaggaggct
cagggttacgaacccaaagaaacctttgttccctttgtgccccagacaaaagagagtgat
gaatccagctcggtgccagcggcctccgagacgccttcacagcccaaacccgcaactcct
aaagcagcagttgacaaggaggaggaagaggaggaaaagcttacattcgcacagtcagag
aaagaaaagactctagatgagttggaagtggacctggacaacatggagctggatgacatc
gacaccacagacgttaaccttgatgacgactttctagacgattga
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integrated database retrieval system
